Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02098 Erythranthe guttata HOM05D007682 ORTHO05D009690 6.6e-26 120.6 93 100.0
SGA_v2.0_scaffold81G26104 Striga asiatica HOM05D007682 ORTHO05D009690 2.2e-21 105.5 61 88.5
Peaxi162Scf00037g01515 Petunia axillaris HOM05D007682 ORTHO05D009690 2.9e-21 105.1 61 90.2
DCAR_022138 Daucus carota HOM05D007682 ORTHO05D009690 6.4e-21 104.0 59 89.8
Oeu010924.1 Olea europaea HOM05D007682 ORTHO05D009690 8.4e-21 103.6 61 86.9
Nitab4.5_0003113g0070 Nicotiana tabacum HOM05D007682 ORTHO05D009690 1.1e-20 103.2 61 88.5
PSO407G0292 Papaver somniferum HOM05D007682 ORTHO05D009690 1.4e-20 102.8 61 86.9
MSTRG.27972 Avicennia marina HOM05D007682 ORTHO05D009690 2.4e-20 102.1 60 86.7
PSO170G1207 Papaver somniferum HOM05D007682 ORTHO05D009690 3.2e-20 101.7 61 85.2
CSS0049840 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 4.1e-20 101.3 61 85.2
CAN.G1273.42 Capsicum annuum HOM05D007682 ORTHO05D009690 4.1e-20 101.3 60 88.3
Nn4g25761 Nelumbo nucifera HOM05D007682 ORTHO05D009690 5.4e-20 100.9 61 83.6
Lsat_1_v5_gn_7_72960 Lactuca sativa HOM05D007682 ORTHO05D009690 7.1e-20 100.5 59 88.1
SEGI_39810 Sequoiadendron giganteum HOM05D007682 ORTHO05D009690 9.2e-20 100.1 60 83.3
Solyc01g099930.3 Solanum lycopersicum HOM05D007682 ORTHO05D009690 9.2e-20 100.1 60 86.7
ECA236G4368 Erigeron canadensis HOM05D000036 ORTHO05D000441 1.6e-19 99.4 59 86.4
TAR633G0769 Trochodendron aralioides HOM05D007682 ORTHO05D009690 1.6e-19 99.4 61 83.6
Cc02_g34370 Coffea canephora HOM05D007682 ORTHO05D009690 2.1e-19 99.0 60 83.3
Hma1.2p1_0472F.1_g159680 Hydrangea macrophylla HOM05D007682 ORTHO05D009690 2.1e-19 99.0 61 83.6
HanXRQChr11g0340111 Helianthus annuus HOM05D007682 ORTHO05D009690 2.7e-19 98.6 59 86.4
QL03p019528 Quercus lobata HOM05D007682 ORTHO05D009690 3.5e-19 98.2 60 83.3
GSVIVG01031165001 Vitis vinifera HOM05D000036 ORTHO05D000441 4.6e-19 97.8 61 83.6
Actinidia21502 Actinidia chinensis HOM05D007682 ORTHO05D009690 6.0e-19 97.4 61 83.6
BcaNung04745 Brassica carinata HOM05D007682 ORTHO05D009690 6.0e-19 97.4 59 84.7
Gorai.007G301900 Gossypium raimondii HOM05D007682 ORTHO05D009690 6.0e-19 97.4 61 83.6
Prupe.8G021600 Prunus persica HOM05D007682 ORTHO05D009690 6.0e-19 97.4 61 82.0
RcHm_v2.0_Chr6g0276771 Rosa chinensis HOM05D007682 ORTHO05D009690 6.0e-19 97.4 61 82.0
CDE11G0615 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 7.8e-19 97.1 61 82.0
Haze_04118 Corylus avellana HOM05D007682 ORTHO05D009690 1.0e-18 96.7 61 82.0
Gohir.A08G208100 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.0e-18 96.7 61 82.0
MD10G1017700 Malus domestica HOM05D007682 ORTHO05D009690 1.0e-18 96.7 61 82.0
CiPaw.08G159600 Carya illinoinensis HOM05D007682 ORTHO05D009690 1.3e-18 96.3 61 82.0
Manes.08G115600 Manihot esculenta HOM05D007682 ORTHO05D009690 1.3e-18 96.3 61 82.0
Sp2g20980 Schrenkiella parvula HOM05D007682 ORTHO05D009690 1.3e-18 96.3 59 84.7
THA.LOC104821730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 1.3e-18 96.3 61 80.3
Thecc.05G315600 Theobroma cacao HOM05D007682 ORTHO05D009690 1.3e-18 96.3 61 82.0
CDE05G1347 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 1.7e-18 95.9 58 84.5
FAN20G0672 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.7e-18 95.9 61 80.3
FAN24G1339 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.7e-18 95.9 61 80.3
Gohir.D08G224900 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.7e-18 95.9 61 80.3
Gohir.D11G279700 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.7e-18 95.9 61 82.0
Atru.chr2.100 Acer truncatum HOM05D007682 ORTHO05D009690 2.3e-18 95.5 61 80.3
A06p37270 Brassica napus HOM05D007682 ORTHO05D009690 2.3e-18 95.5 59 83.1
C07p41180 Brassica napus HOM05D007682 ORTHO05D009690 2.3e-18 95.5 59 83.1
BolC7t44646H Brassica oleracea HOM05D007682 ORTHO05D009690 2.3e-18 95.5 59 83.1
BraA06t26650Z Brassica rapa HOM05D007682 ORTHO05D009690 2.3e-18 95.5 59 83.1
CARHR186340 Cardamine hirsuta HOM05D007682 ORTHO05D009690 2.3e-18 95.5 59 84.7
Glyma.19G231600 Glycine max HOM05D007682 ORTHO05D009690 2.3e-18 95.5 61 80.3
Gohir.A11G269500 Gossypium hirsutum HOM05D007682 ORTHO05D009690 2.3e-18 95.5 61 82.0
PGR031G1366 Punica granatum HOM05D007682 ORTHO05D009690 2.3e-18 95.5 61 80.3
Sed0011876 Sechium edule HOM05D007682 ORTHO05D009690 2.3e-18 95.5 61 82.0
Aa31LG11G9610 Aethionema arabicum HOM05D007682 ORTHO05D009690 3.0e-18 95.1 59 83.1
HPP92_010663 Vanilla planifolia HOM05D007682 ORTHO05D009690 3.0e-18 95.1 64 81.2
arahy.Tifrunner.gnm1.ann1.P6132C Arachis hypogaea HOM05D007682 ORTHO05D009690 3.9e-18 94.7 61 80.3
arahy.Tifrunner.gnm1.ann1.S47DRU Arachis hypogaea HOM05D007682 ORTHO05D009690 3.9e-18 94.7 61 80.3
Eucgr.H03256 Eucalyptus grandis HOM05D007682 ORTHO05D009690 3.9e-18 94.7 61 78.7
FAN15G0817 Fragaria x ananassa HOM05D007682 ORTHO05D009690 5.1e-18 94.4 61 78.7
Lalb_Chr15g0077471 Lupinus albus HOM05D007682 ORTHO05D009690 5.1e-18 94.4 61 80.3
THA.LOC104818730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 5.1e-18 94.4 61 78.7
AT5G27860 Arabidopsis thaliana HOM05D007682 ORTHO05D009690 6.6e-18 94.0 59 83.1
Gorai.004G238900 Gossypium raimondii HOM05D007682 ORTHO05D009690 6.6e-18 94.0 61 78.7
TPR.G1619 Trifolium pratense HOM05D007682 ORTHO05D009690 6.6e-18 94.0 61 80.3
TWI56G1223 Tripterygium wilfordii HOM05D007682 ORTHO05D009690 6.6e-18 94.0 61 77.0
AUR62000737 Chenopodium quinoa HOM05D007682 ORTHO05D009690 8.6e-18 93.6 59 79.7
CsaV3_1G038640 Cucumis sativus L. HOM05D007682 ORTHO05D009690 8.6e-18 93.6 61 80.3
Glyma.03G234200 Glycine max HOM05D007682 ORTHO05D009690 8.6e-18 93.6 61 78.7
Medtr7g112600 Medicago truncatula HOM05D007682 ORTHO05D009690 8.6e-18 93.6 61 80.3
Psat3g011680 Pisum sativum HOM05D007682 ORTHO05D009690 8.6e-18 93.6 61 80.3
Os12g0516700 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 1.9e-17 92.4 61 73.8
Os12g0554000 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 1.9e-17 92.4 61 73.8
Phvul.006G088300 Phaseolus vulgaris HOM05D007682 ORTHO05D009690 1.9e-17 92.4 61 77.0
Potri.005G023000 Populus trichocarpa HOM05D007682 ORTHO05D009690 1.9e-17 92.4 61 78.7
Dinv30837 Davidia involucrata HOM05D007682 ORTHO05D009690 2.5e-17 92.0 61 77.0
Duzib177G0692 Durio zibethinus HOM05D007682 ORTHO05D009690 3.3e-17 91.7 59 81.4
SMO367G0406 Selaginella moellendorffii HOM05D007682 ORTHO05D009690 3.3e-17 91.7 61 77.0
AUR62005227 Chenopodium quinoa HOM05D007682 ORTHO05D009690 4.3e-17 91.3 59 76.3
Cfa006654 Carpinus fangiana HOM05D007682 ORTHO05D009690 1.2e-16 89.7 61 77.0
Sabra05G0029000 Salix brachista HOM05D007682 ORTHO05D009690 1.6e-16 89.4 61 77.0
Sc16g0008750 Simmondsia chinensis HOM05D000036 ORTHO05D001038 4.7e-16 87.8 61 73.8
AL6G39080 Arabidopsis lyrata HOM05D007682 ORTHO05D009690 8.1e-16 87.0 59 78.0
Zm00001eb410110 Zea mays HOM05D007682 ORTHO05D009690 1.4e-15 86.3 63 69.8
ATR0693G225 Amborella trichopoda HOM05D007682 ORTHO05D009690 2.4e-15 85.5 52 82.7
MBI19_g44105_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 3.1e-15 85.1 54 79.6
Nitab4.5_0003497g0050 Nicotiana tabacum HOM05D007682 ORTHO05D009690 4.0e-15 84.7 52 84.6
CSS0031357 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 2.6e-14 82.0 61 68.9
unitig_699.g19250 Utricularia gibba HOM05D007682 ORTHO05D009690 2.6e-14 82.0 50 82.0
Lj1g0016295 Lotus japonicus HOM05D007682 ORTHO05D009690 9.9e-14 80.1 66 68.2
DCAR_022140 Daucus carota HOM05D007682 ORTHO05D009690 1.3e-13 79.7 52 78.8
HPP92_010684 Vanilla planifolia HOM05D007682 ORTHO05D009690 2.2e-13 79.0 61 72.1
Ah.06g189950 Amaranthus hybridus HOM05D007682 ORTHO05D009690 3.8e-13 78.2 51 76.5
EL10Ac4g09894 Beta vulgaris HOM05D007682 ORTHO05D009690 1.1e-12 76.6 51 74.5
Hund07111 Selenicereus undatus HOM05D007682 ORTHO05D009690 1.9e-12 75.9 78 56.4
MBI19_g47767_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 5.1e-10 67.8 54 68.5


User provided reference genes

Program Settings