Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02095 Erythranthe guttata HOM05D002129 ORTHO05D002188 8.1e-153 543.9 312 100.0
MSTRG.25657 Avicennia marina HOM05D002129 ORTHO05D002188 2.4e-27 127.1 312 34.9
Oeu042387.1 Olea europaea HOM05D002129 ORTHO05D002188 2.6e-26 123.6 197 40.6
vmacro13912 Vaccinium macrocarpon HOM05D002129 ORTHO05D002188 3.4e-26 123.2 178 43.3
SalBow1G3214 Salvia bowleyana HOM05D002129 ORTHO05D002188 2.9e-25 120.2 438 28.3
SGA_v2.0_scaffold144G35850 Striga asiatica HOM05D002129 ORTHO05D002188 3.5e-23 113.2 271 32.1
Oeu009945.1 Olea europaea HOM05D002129 ORTHO05D002188 6.0e-23 112.5 268 35.4
SGA_v2.0_scaffold111G31429 Striga asiatica HOM05D002129 ORTHO05D002188 1.8e-22 110.9 316 31.3
CSS0045654 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 3.0e-22 110.2 175 41.1
Gohir.A02G102200 Gossypium hirsutum HOM05D002129 ORTHO05D002188 3.0e-22 110.2 224 35.3
Cc08_g15780 Coffea canephora HOM05D002129 ORTHO05D002188 6.7e-22 109.0 221 36.7
Rhsim07G0084000 Rhododendron simsii HOM05D002129 ORTHO05D002188 1.5e-21 107.8 176 42.0
Migut.E01236 Erythranthe guttata HOM05D002129 ORTHO05D002188 2.5e-21 107.1 171 40.4
Duzib205G0555 Durio zibethinus HOM05D002129 ORTHO05D002188 1.3e-20 104.8 252 35.3
Actinidia27335 Actinidia chinensis HOM05D002129 ORTHO05D002188 1.1e-19 101.7 209 34.9
Gohir.D03G081900 Gossypium hirsutum HOM05D002129 ORTHO05D002188 1.4e-19 101.3 203 35.0
Gorai.003G081700 Gossypium raimondii HOM05D002129 ORTHO05D002188 1.4e-19 101.3 224 32.6
TWI60G1278 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 2.4e-19 100.5 209 36.8
SGA_v2.0_scaffold96G28980 Striga asiatica HOM05D002129 ORTHO05D002188 6.9e-19 99.0 274 33.6
Thecc.03G293200 Theobroma cacao HOM05D002129 ORTHO05D002188 1.5e-18 97.8 229 33.2
Dinv37550 Davidia involucrata HOM05D002129 ORTHO05D002188 3.4e-18 96.7 185 35.7
CAN.G532.94 Capsicum annuum HOM05D002129 ORTHO05D002188 4.5e-18 96.3 168 35.1
arahy.Tifrunner.gnm1.ann1.Q3GPI2 Arachis hypogaea HOM05D002129 ORTHO05D002188 5.8e-18 95.9 281 30.2
Nitab4.5_0000223g0210 Nicotiana tabacum HOM05D002129 ORTHO05D002188 1.0e-17 95.1 228 32.5
COL.COLO4_21718 Corchorus olitorius HOM05D002129 ORTHO05D002188 1.7e-17 94.4 229 32.8
arahy.Tifrunner.gnm1.ann1.DN0YA4 Arachis hypogaea HOM05D002129 ORTHO05D002188 2.2e-17 94.0 281 31.0
Nitab4.5_0004161g0030 Nicotiana tabacum HOM05D002129 ORTHO05D002188 2.2e-17 94.0 202 33.2
Sopen08g030310 Solanum pennellii HOM05D002129 ORTHO05D002188 2.9e-17 93.6 221 31.7
Haze_08667 Corylus avellana HOM05D002129 ORTHO05D002188 4.9e-17 92.8 162 40.1
Gohir.A09G190800 Gossypium hirsutum HOM05D002129 ORTHO05D002188 6.5e-17 92.4 209 34.4
Lalb_Chr05g0224241 Lupinus albus HOM05D002129 ORTHO05D002188 6.5e-17 92.4 181 38.1
QL02p031434 Quercus lobata HOM05D002129 ORTHO05D002188 6.5e-17 92.4 184 37.0
Cfa012842 Carpinus fangiana HOM05D002129 ORTHO05D002188 8.4e-17 92.0 167 38.9
Manes.02G012600 Manihot esculenta HOM05D002129 ORTHO05D002188 8.4e-17 92.0 181 37.0
Duzib068G1418 Durio zibethinus HOM05D002129 ORTHO05D002188 1.1e-16 91.7 276 31.2
SalBow8G2059 Salvia bowleyana HOM05D002129 ORTHO05D002188 1.1e-16 91.7 196 35.2
THA.LOC104809341 Tarenaya hassleriana HOM05D002129 ORTHO05D002188 1.1e-16 91.7 173 35.3
Gorai.006G207900 Gossypium raimondii HOM05D002129 ORTHO05D002188 1.4e-16 91.3 212 34.0
PGSC0003DMG400012303 Solanum tuberosum HOM05D002129 ORTHO05D002188 1.9e-16 90.9 166 34.9
GSVIVG01019499001 Vitis vinifera HOM05D002129 ORTHO05D002188 1.9e-16 90.9 257 31.9
Gohir.D09G185400 Gossypium hirsutum HOM05D002129 ORTHO05D002188 5.5e-16 89.4 212 33.5
unitig_52.g17439 Utricularia gibba HOM05D002129 ORTHO05D002188 5.5e-16 89.4 148 42.6
CiPaw.12G085000 Carya illinoinensis HOM05D002129 ORTHO05D002188 7.1e-16 89.0 177 37.3
ECA233G6022 Erigeron canadensis HOM05D002129 ORTHO05D002188 7.1e-16 89.0 195 32.8
Manes.01G045900 Manihot esculenta HOM05D002129 ORTHO05D002188 7.1e-16 89.0 320 27.5
CiPaw.11G123900 Carya illinoinensis HOM05D002129 ORTHO05D002188 1.2e-15 88.2 177 37.9
RcHm_v2.0_Chr7g0195431 Rosa chinensis HOM05D002129 ORTHO05D002188 1.2e-15 88.2 206 34.5
Eucgr.E00844 Eucalyptus grandis HOM05D002129 ORTHO05D002188 1.6e-15 87.8 299 28.1
Lj4g0008940 Lotus japonicus HOM05D002129 ORTHO05D002188 2.1e-15 87.4 202 33.2
MD14G1121500 Malus domestica HOM05D002129 ORTHO05D002188 2.7e-15 87.0 214 33.6
Carub.0007s3359 Capsella rubella HOM05D002129 ORTHO05D002188 4.6e-15 86.3 245 33.1
Lsat_1_v5_gn_6_12040 Lactuca sativa HOM05D002129 ORTHO05D002188 1.0e-14 85.1 209 27.3
Manes.10G064266 Manihot esculenta HOM05D002129 ORTHO05D002188 1.8e-14 84.3 266 31.2
Solyc08g082010.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 1.8e-14 84.3 244 28.3
A04p14960 Brassica napus HOM05D002129 ORTHO05D002188 3.0e-14 83.6 243 30.9
BcaC02g08917 Brassica carinata HOM05D002129 ORTHO05D002188 3.9e-14 83.2 241 31.1
C04p49150 Brassica napus HOM05D002129 ORTHO05D002188 3.9e-14 83.2 241 31.1
BolC4t26499H Brassica oleracea HOM05D002129 ORTHO05D002188 3.9e-14 83.2 241 31.1
Potri.001G094200 Populus trichocarpa HOM05D002129 ORTHO05D002188 5.1e-14 82.8 239 32.6
Duzib084G0477 Durio zibethinus HOM05D002129 ORTHO05D002188 6.7e-14 82.4 206 31.6
FvH4_5g04072 Fragaria vesca HOM05D002129 ORTHO05D002188 6.7e-14 82.4 203 35.0
Peaxi162Scf00074g01134 Petunia axillaris HOM05D002129 ORTHO05D002188 8.7e-14 82.0 224 30.4
arahy.Tifrunner.gnm1.ann1.P7UIV5 Arachis hypogaea HOM05D002129 ORTHO05D002188 1.5e-13 81.3 149 40.9
CSS0027740 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 1.5e-13 81.3 251 29.1
FAN18G3989 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.5e-13 81.3 202 34.2
TAR374G0929 Trochodendron aralioides HOM05D002129 ORTHO05D002188 1.5e-13 81.3 258 29.1
CSS0018198 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 1.9e-13 80.9 251 29.1
AT5G41790 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 2.5e-13 80.5 311 27.7
arahy.Tifrunner.gnm1.ann1.F3VNHJ Arachis hypogaea HOM05D002129 ORTHO05D002188 2.5e-13 80.5 149 40.9
Atru.chr9.2042 Acer truncatum HOM05D002129 ORTHO05D002188 3.3e-13 80.1 157 36.9
MD06G1102300 Malus domestica HOM05D002129 ORTHO05D002188 3.3e-13 80.1 181 33.1
FAN08G2643 Fragaria x ananassa HOM05D002129 ORTHO05D002188 4.3e-13 79.7 207 33.3
Sp2g00430 Schrenkiella parvula HOM05D002129 ORTHO05D002188 4.3e-13 79.7 192 32.8
Potri.003G137400 Populus trichocarpa HOM05D002129 ORTHO05D002188 5.7e-13 79.3 204 33.8
Ca_17495_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 1.3e-12 78.2 277 29.2
Sp7g00300 Schrenkiella parvula HOM05D002129 ORTHO05D002188 1.6e-12 77.8 245 31.0
unitig_62.g23616 Utricularia gibba HOM05D002129 ORTHO05D002188 2.8e-12 77.0 202 33.7
Sabra03G0098900 Salix brachista HOM05D002129 ORTHO05D002188 3.7e-12 76.6 251 31.1
BraA04t17139Z Brassica rapa HOM05D002129 ORTHO05D002188 4.8e-12 76.3 293 28.7
FAN13G0971 Fragaria x ananassa HOM05D002129 ORTHO05D002188 6.3e-12 75.9 207 33.3
Thhalv10023387m.g Eutrema salsugineum HOM05D002129 ORTHO05D002188 8.2e-12 75.5 202 31.7
Migut.A00678 Erythranthe guttata HOM05D002129 ORTHO05D002188 1.1e-11 75.1 124 44.4
HanXRQChr02g0048241 Helianthus annuus HOM05D002129 ORTHO05D002188 1.1e-11 75.1 156 30.8
BcaB07g31455 Brassica carinata HOM05D002129 ORTHO05D002188 1.8e-11 74.3 183 32.8
CARHR212780 Cardamine hirsuta HOM05D002129 ORTHO05D002188 1.8e-11 74.3 195 31.8
Aa31LG9G340 Aethionema arabicum HOM05D002129 ORTHO05D002188 2.4e-11 73.9 222 30.2
AT1G64330 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 2.4e-11 73.9 157 31.2
MSTRG.1816 Avicennia marina HOM05D002129 ORTHO05D002188 2.4e-11 73.9 150 38.0
Carub.0002s0048 Capsella rubella HOM05D002129 ORTHO05D002188 2.4e-11 73.9 157 31.2
Lalb_Chr16g0390551 Lupinus albus HOM05D002129 ORTHO05D002188 2.4e-11 73.9 269 26.4
Psat7g027680 Pisum sativum HOM05D002129 ORTHO05D002188 3.1e-11 73.6 150 33.3
BcaB06g27672 Brassica carinata HOM05D002129 ORTHO05D002188 4.1e-11 73.2 242 30.2
AL2G10610 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 5.3e-11 72.8 297 26.6
Ciclev10018618m.g Citrus clementina HOM05D002129 ORTHO05D002188 5.3e-11 72.8 274 28.1
Dinv38857 Davidia involucrata HOM05D002129 ORTHO05D002188 9.0e-11 72.0 293 26.6
Glyma.08G021400 Glycine max HOM05D002129 ORTHO05D002188 9.0e-11 72.0 212 32.1
TPR.G3412 Trifolium pratense HOM05D002129 ORTHO05D002188 9.0e-11 72.0 209 30.1
C09p17910 Brassica napus HOM05D002129 ORTHO05D002188 1.5e-10 71.2 268 26.9
BolC9t54688H Brassica oleracea HOM05D002129 ORTHO05D002188 1.5e-10 71.2 268 26.9
BcaC04g22559 Brassica carinata HOM05D002129 ORTHO05D002188 3.4e-10 70.1 268 26.9
AUR62019808 Chenopodium quinoa HOM05D002129 ORTHO05D002188 4.5e-10 69.7 136 35.3
CANSAT21G2383 Cannabis sativa HOM05D002129 ORTHO05D002188 2.9e-09 67.0 171 29.8
Carub.0007s3367 Capsella rubella HOM05D002129 ORTHO05D021914 2.9e-09 67.0 285 26.3
Medtr8g099275 Medicago truncatula HOM05D002129 ORTHO05D002188 2.9e-09 67.0 280 28.6
Phvul.002G296300 Phaseolus vulgaris HOM05D002129 ORTHO05D002188 6.5e-09 65.9 223 28.3
AUR62010809 Chenopodium quinoa HOM05D002129 ORTHO05D002188 8.5e-09 65.5 163 31.9
A09p14790 Brassica napus HOM05D002129 ORTHO05D002188 1.1e-08 65.1 268 26.1
Dinv37551 Davidia involucrata HOM05D002129 ORTHO05D002188 1.1e-08 65.1 277 27.4
FAN18G4528 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.1e-08 65.1 171 35.1
Cpa.g.sc79.65 Carica papaya HOM05D002129 ORTHO05D002188 1.4e-08 64.7 198 30.8
DCAR_005027 Daucus carota HOM05D002129 ORTHO05D002188 2.5e-08 63.9 256 21.9
Lalb_Chr09g0332631 Lupinus albus HOM05D002129 ORTHO05D002188 2.5e-08 63.9 143 36.4
Rhsim02G0241100 Rhododendron simsii HOM05D002129 ORTHO05D002188 5.5e-08 62.8 176 30.7
AL7G47470 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 7.2e-08 62.4 301 25.9
PGR042G1587 Punica granatum HOM05D002129 ORTHO05D002188 7.2e-08 62.4 96 35.4
ClCG07G014890 Citrullus lanatus HOM05D002129 ORTHO05D002188 9.3e-08 62.0 233 27.9
ECA240G2507 Erigeron canadensis HOM05D002129 ORTHO05D002188 1.2e-07 61.6 198 29.8
Lsat_1_v5_gn_6_85821 Lactuca sativa HOM05D002129 ORTHO05D002188 1.6e-07 61.2 196 28.1
PSO170G1432 Papaver somniferum HOM05D031015 ORTHO05D002188 1.6e-07 61.2 88 37.5
Glyma.05G215100 Glycine max HOM05D002129 ORTHO05D002188 2.1e-07 60.8 326 27.6
CSS0047098 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 2.7e-07 60.5 235 25.1
Prupe.5G115200 Prunus persica HOM05D002129 ORTHO05D002188 2.7e-07 60.5 301 26.2
PSO384G3006 Papaver somniferum HOM05D031015 ORTHO05D002188 4.6e-07 59.7 88 37.5
CSS0015477 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 6.1e-07 59.3 235 25.1
CARHR046630 Cardamine hirsuta HOM05D002129 ORTHO05D002188 6.1e-07 59.3 259 25.9
Oeu061086.1 Olea europaea HOM05D002129 ORTHO05D002188 6.1e-07 59.3 267 27.3
CAN.G825.42 Capsicum annuum HOM05D002129 ORTHO05D002188 7.9e-07 58.9 65 53.8
Sc07g0009960 Simmondsia chinensis HOM05D002129 ORTHO05D002188 7.9e-07 58.9 193 26.9
Gohir.A08G099784 Gossypium hirsutum HOM05D002129 ORTHO05D002188 1.0e-06 58.5 249 25.7
VMungo0251G1428 Vigna mungo HOM05D002129 ORTHO05D002188 1.3e-06 58.2 314 25.2
HanXRQChr03g0085141 Helianthus annuus HOM05D002129 ORTHO05D002188 2.3e-06 57.4 325 20.9
MD14G1121400 Malus domestica HOM05D002129 ORTHO05D002188 3.0e-06 57.0 236 26.7
Hund11405 Selenicereus undatus HOM05D002129 ORTHO05D002188 3.9e-06 56.6 133 33.1
Actinidia01396 Actinidia chinensis HOM05D002129 ORTHO05D002188 5.1e-06 56.2 252 23.8


User provided reference genes

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