Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 8.0e-43 177.2 125 100.0
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.3e-42 175.6 125 99.2
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.1e-35 152.5 75 98.7
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.0e-26 122.1 78 80.8
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.8e-19 99.0 57 82.5
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.2e-17 93.6 75 62.7
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.2e-17 93.6 74 58.1
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.2e-16 89.4 71 62.0
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.9e-16 88.2 74 58.1
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 6.4e-16 87.8 61 63.9
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.4e-15 86.7 75 60.0
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.9e-15 86.3 61 67.2
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.1e-15 85.1 74 56.8
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 5.4e-15 84.7 77 58.4
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 7.0e-15 84.3 61 68.9
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 9.2e-15 84.0 74 55.4
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 1.2e-14 83.6 71 57.7
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 2.1e-14 82.8 70 54.3
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 6.0e-14 81.3 74 55.4
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.0e-13 80.5 74 56.8
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.3e-13 80.1 66 62.1
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.3e-13 80.1 61 57.4
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.3e-13 80.1 61 60.7
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.7e-13 79.7 53 71.7
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.7e-13 79.7 71 54.9
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.3e-13 79.3 61 65.6
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.3e-13 79.3 74 54.1
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 5.1e-13 78.2 52 75.0
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.1e-13 78.2 53 69.8
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.1e-13 78.2 53 69.8
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.6e-13 77.4 61 60.7
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 8.6e-13 77.4 74 52.7
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.1e-12 77.0 70 55.7
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 1.1e-12 77.0 70 55.7
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.9e-12 76.3 74 54.1
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.9e-12 76.3 74 48.6
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 2.5e-12 75.9 74 52.7
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 4.3e-12 75.1 74 51.4
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 5.6e-12 74.7 74 51.4
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 5.6e-12 74.7 74 51.4
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 7.3e-12 74.3 52 67.3
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 7.3e-12 74.3 70 51.4
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 9.5e-12 73.9 73 52.1
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 9.5e-12 73.9 43 79.1
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 1.6e-11 73.2 74 51.4
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 1.6e-11 73.2 69 53.6
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 3.6e-11 72.0 70 51.4
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.2e-11 71.2 74 48.6
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 8.1e-11 70.9 61 52.5
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 8.1e-11 70.9 74 50.0
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 1.4e-10 70.1 74 51.4
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 1.4e-10 70.1 44 70.5
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 1.8e-10 69.7 44 70.5
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.3e-10 69.3 49 67.3
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 3.1e-10 68.9 74 50.0
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.1e-10 68.9 70 52.9
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 4.0e-10 68.6 39 76.9
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.0e-10 68.6 74 50.0
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.2e-10 68.2 58 58.6
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 5.2e-10 68.2 44 70.5
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 5.2e-10 68.2 68 52.9
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.8e-10 67.8 61 54.1
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 8.9e-10 67.4 57 57.9
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 8.9e-10 67.4 39 74.4
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 8.9e-10 67.4 43 67.4
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.9e-10 67.4 73 46.6
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.2e-09 67.0 74 48.6
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 1.2e-09 67.0 66 48.5
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 1.5e-09 66.6 44 68.2
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.5e-09 66.6 61 52.5
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.5e-09 66.6 74 50.0
Sc20g0003610 Simmondsia chinensis HOM05D009547 ORTHO05D011610 1.5e-09 66.6 45 64.4
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.5e-09 66.6 44 65.9
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 4.4e-09 65.1 45 62.2
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 5.8e-09 64.7 43 62.8
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 5.8e-09 64.7 74 45.9
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.8e-09 64.7 69 47.8
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 5.8e-09 64.7 39 71.8
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 7.5e-09 64.3 44 65.9
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 7.5e-09 64.3 44 65.9
EL10Ac1g01574 Beta vulgaris HOM05D002879 ORTHO05D002930 7.5e-09 64.3 61 54.1
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 7.5e-09 64.3 61 49.2
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 9.9e-09 63.9 44 63.6
SMO197G0116 Selaginella moellendorffii HOM05D030254 ORTHO05D002930 1.3e-08 63.5 70 45.7
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 1.3e-08 63.5 61 52.5
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.7e-08 63.2 47 63.8
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.2e-08 62.8 57 54.4
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.2e-08 62.8 42 69.0
EL10Ac1g01572 Beta vulgaris HOM05D002879 ORTHO05D002930 2.9e-08 62.4 39 74.4
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 3.7e-08 62.0 71 47.9
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 3.7e-08 62.0 73 42.5
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 4.9e-08 61.6 48 54.2
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 6.4e-08 61.2 74 43.2
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 6.4e-08 61.2 91 39.6
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 8.3e-08 60.8 90 38.9
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.1e-07 60.5 46 58.7
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 1.9e-07 59.7 59 50.8
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.9e-07 59.7 47 59.6
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 2.4e-07 59.3 70 47.1
AUR62026686 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.4e-07 59.3 36 72.2
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.4e-07 59.3 36 75.0
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 2.4e-07 59.3 53 49.1
Eucgr.E02067 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.2e-07 58.9 37 73.0
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 3.2e-07 58.9 44 56.8
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.1e-07 58.5 73 43.8
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 4.1e-07 58.5 38 71.1
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.1e-07 58.5 39 69.2
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.1e-07 58.5 39 69.2
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.1e-07 58.5 39 71.8
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 4.1e-07 58.5 91 36.3
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 5.4e-07 58.2 40 65.0
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 5.4e-07 58.2 61 52.5
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 5.4e-07 58.2 31 83.9
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.4e-07 58.2 39 69.2
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 7.1e-07 57.8 74 43.2
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.1e-07 57.8 48 60.4
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 9.2e-07 57.4 43 60.5
Mapoly0798s0001 Marchantia polymorpha HOM05D019730 ORTHO05D022910 9.2e-07 57.4 74 43.2
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 9.2e-07 57.4 61 50.8
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.2e-06 57.0 74 43.2
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 1.2e-06 57.0 43 62.8
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.2e-06 57.0 74 44.6
SMO277G0001 Selaginella moellendorffii HOM05D030254 ORTHO05D002930 1.2e-06 57.0 70 41.4
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 1.6e-06 56.6 39 66.7
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 2.1e-06 56.2 74 41.9
PGR042G1359 Punica granatum HOM05D002879 ORTHO05D002930 2.1e-06 56.2 50 48.0
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.1e-06 56.2 35 71.4
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.1e-06 56.2 35 71.4
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 2.7e-06 55.8 39 64.1
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.7e-06 55.8 44 56.8
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.5e-06 55.5 37 70.3
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.5e-06 55.5 37 70.3
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.5e-06 55.5 37 70.3
AUR62040594 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.5e-06 55.5 45 53.3
EL10Ac1g01573 Beta vulgaris HOM05D002879 ORTHO05D002930 4.6e-06 55.1 61 47.5
Duzib093G1472 Durio zibethinus HOM05D002879 ORTHO05D002930 4.6e-06 55.1 33 72.7
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.0e-06 54.7 73 41.1
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 7.8e-06 54.3 31 77.4
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 7.8e-06 54.3 74 43.2


User provided reference genes

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