Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 7.8e-39 163.7 107 100.0
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.6e-36 154.8 76 98.7
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.4e-35 152.9 75 98.7
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.6e-29 131.0 106 81.1
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.3e-20 103.2 58 84.5
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 4.0e-19 98.2 75 60.0
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.3e-19 97.8 76 64.5
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 7.6e-18 94.0 72 63.9
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.7e-17 92.8 75 60.0
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 2.9e-17 92.0 62 66.1
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 6.4e-17 90.9 76 61.8
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 8.4e-17 90.5 62 69.4
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 1.9e-16 89.4 78 60.3
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 3.2e-16 88.6 62 71.0
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.2e-16 88.6 75 57.3
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.2e-16 88.2 75 57.3
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 7.1e-16 87.4 75 57.3
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 2.1e-15 85.9 71 54.9
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 2.1e-15 85.9 75 57.3
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 3.5e-15 85.1 75 58.7
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.0e-15 84.3 67 64.2
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.0e-15 84.3 72 56.9
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 6.0e-15 84.3 62 59.7
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 6.0e-15 84.3 62 62.9
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 7.9e-15 84.0 75 56.0
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.3e-14 83.2 62 67.7
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 2.3e-14 82.4 53 77.4
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.0e-14 82.0 75 56.0
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.9e-14 81.6 62 62.9
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 6.7e-14 80.9 75 50.7
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 8.7e-14 80.5 75 56.0
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.7e-14 80.5 75 54.7
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.7e-14 80.5 75 54.7
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 8.7e-14 80.5 75 54.7
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 8.7e-14 80.5 75 53.3
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.1e-13 80.1 74 55.4
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 1.1e-13 80.1 74 55.4
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.5e-13 79.7 75 53.3
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.9e-13 79.3 75 53.3
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 1.9e-13 79.3 75 53.3
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 2.5e-13 79.0 70 55.7
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 4.3e-13 78.2 74 54.1
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 4.3e-13 78.2 62 61.3
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 5.6e-13 77.8 75 53.3
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 5.6e-13 77.8 70 55.7
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 9.6e-13 77.0 71 52.1
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.1e-12 75.9 75 50.7
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.8e-12 75.5 75 52.0
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 4.8e-12 74.7 75 53.3
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 4.8e-12 74.7 71 52.1
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 6.2e-12 74.3 45 73.3
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 8.2e-12 73.9 45 73.3
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 1.1e-11 73.6 75 52.0
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-11 73.2 75 52.0
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 1.8e-11 72.8 40 80.0
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 2.4e-11 72.4 45 73.3
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.0e-11 71.6 71 52.1
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.0e-11 71.6 75 50.7
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.0e-11 71.6 74 52.7
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.3e-11 71.2 61 52.5
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 5.3e-11 71.2 44 70.5
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 5.3e-11 71.2 75 52.0
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 5.3e-11 71.2 72 52.8
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.9e-11 70.9 45 68.9
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 9.0e-11 70.5 74 47.3
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 9.0e-11 70.5 62 54.8
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 1.5e-10 69.7 67 49.3
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 2.0e-10 69.3 75 48.0
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 2.0e-10 69.3 45 68.9
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 2.0e-10 69.3 40 75.0
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.0e-10 69.3 62 53.2
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 2.6e-10 68.9 40 75.0
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 3.4e-10 68.6 44 65.9
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 3.4e-10 68.6 45 68.9
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 3.4e-10 68.6 45 68.9
EL10Ac1g01574 Beta vulgaris HOM05D002879 ORTHO05D002930 3.4e-10 68.6 62 56.5
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.4e-10 68.6 58 58.6
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.5e-10 68.2 45 66.7
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 5.8e-10 67.8 57 57.9
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 7.6e-10 67.4 45 64.4
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.0e-09 67.0 58 56.9
Sc20g0003610 Simmondsia chinensis HOM05D009547 ORTHO05D011610 1.0e-09 67.0 45 64.4
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.0e-09 67.0 43 72.1
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.7e-09 66.2 69 47.8
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 1.7e-09 66.2 74 44.6
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.2e-09 65.9 48 64.6
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 2.2e-09 65.9 75 45.3
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 2.2e-09 65.9 61 54.1
SMO197G0116 Selaginella moellendorffii HOM05D030254 ORTHO05D002930 2.9e-09 65.5 72 45.8
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 3.8e-09 65.1 45 64.4
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 3.8e-09 65.1 75 48.0
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 4.9e-09 64.7 61 49.2
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.5e-09 64.3 47 61.7
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 1.1e-08 63.5 75 48.0
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.1e-08 63.5 48 62.5
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 1.1e-08 63.5 48 56.2
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.1e-08 63.5 40 72.5
AUR62026686 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.4e-08 63.2 37 75.7
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.4e-08 63.2 44 63.6
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 1.4e-08 63.2 45 60.0
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.9e-08 62.8 74 45.9
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.9e-08 62.8 40 72.5
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.9e-08 62.8 40 72.5
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.9e-08 62.8 40 75.0
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 2.5e-08 62.4 75 45.3
EL10Ac1g01572 Beta vulgaris HOM05D002879 ORTHO05D002930 2.5e-08 62.4 39 74.4
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 3.2e-08 62.0 54 50.0
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 4.2e-08 61.6 62 48.4
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 4.2e-08 61.6 75 45.3
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.2e-08 61.6 49 63.3
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 5.5e-08 61.2 41 65.9
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.5e-08 61.2 40 70.0
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 7.1e-08 60.8 39 71.8
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 7.1e-08 60.8 40 70.0
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 7.1e-08 60.8 44 65.9
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 9.3e-08 60.5 75 45.3
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 1.2e-07 60.1 59 50.8
Mapoly0798s0001 Marchantia polymorpha HOM05D019730 ORTHO05D022910 1.2e-07 60.1 74 44.6
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.2e-07 60.1 45 60.0
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.2e-07 60.1 62 51.6
EL10Ac1g01573 Beta vulgaris HOM05D002879 ORTHO05D002930 2.1e-07 59.3 62 50.0
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 2.7e-07 58.9 40 65.0
Eucgr.E02067 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.7e-07 58.9 37 73.0
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.7e-07 58.9 74 43.2
SMO277G0001 Selaginella moellendorffii HOM05D030254 ORTHO05D002930 2.7e-07 58.9 72 41.7
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.7e-07 58.9 45 57.8
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.7e-07 58.9 75 45.3
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 3.5e-07 58.5 61 52.5
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 3.5e-07 58.5 75 41.3
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.6e-07 58.2 38 71.1
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.6e-07 58.2 38 71.1
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.6e-07 58.2 38 71.1
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 4.6e-07 58.2 48 58.3
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.6e-07 58.2 45 62.2
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.6e-07 58.2 41 63.4
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.6e-07 58.2 41 63.4
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 6.0e-07 57.8 39 66.7
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 1.0e-06 57.0 48 56.2
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.0e-06 57.0 74 43.2
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 1.3e-06 56.6 74 39.2
PGR042G1359 Punica granatum HOM05D002879 ORTHO05D002930 1.3e-06 56.6 50 48.0
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.3e-06 56.6 38 68.4
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 2.3e-06 55.8 75 41.3
AUR62014501 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.3e-06 55.8 40 67.5
AUR62035549 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.3e-06 55.8 40 67.5
AUR62038034 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.3e-06 55.8 40 67.5
AUR62038037 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.3e-06 55.8 40 67.5
AUR62040594 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.3e-06 55.8 45 53.3
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 3.0e-06 55.5 49 55.1
Duzib093G1472 Durio zibethinus HOM05D002879 ORTHO05D002930 3.9e-06 55.1 33 72.7
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 5.1e-06 54.7 75 41.3
MBI07_g22283_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 5.1e-06 54.7 62 43.5
Mapoly0741s0001 Marchantia polymorpha HOM05D019730 ORTHO05D022910 5.1e-06 54.7 74 40.5
Os01g0963600 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 5.1e-06 54.7 75 34.7
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 5.1e-06 54.7 44 54.5
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.7e-06 54.3 74 41.9
Mapoly0098s0001 Marchantia polymorpha HOM05D019730 ORTHO05D022910 8.7e-06 53.9 75 41.3
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.7e-06 53.9 34 73.5


User provided reference genes

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