Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01987 Erythranthe guttata HOM05D006420 ORTHO05D008009 2.5e-142 508.8 275 100.0
Migut.N02012 Erythranthe guttata HOM05D006420 ORTHO05D008009 2.5e-142 508.8 275 100.0
MSTRG.5100 Avicennia marina HOM05D006420 ORTHO05D008009 2.0e-107 392.9 275 76.4
Oeu010909.1 Olea europaea HOM05D006420 ORTHO05D008009 2.0e-94 349.7 272 66.5
Hma1.2p1_0928F.1_g237740 Hydrangea macrophylla HOM05D006420 ORTHO05D008009 3.7e-93 345.5 278 65.1
Dinv23938 Davidia involucrata HOM05D006420 ORTHO05D008009 3.2e-92 342.4 280 63.6
TAR636G1821 Trochodendron aralioides HOM05D006420 ORTHO05D008009 3.2e-92 342.4 231 74.0
Manes.08G120400 Manihot esculenta HOM05D006420 ORTHO05D008009 4.1e-92 342.0 229 71.6
Lsat_1_v5_gn_9_123421 Lactuca sativa HOM05D006420 ORTHO05D008009 2.0e-91 339.7 223 72.2
Thecc.05G302400 Theobroma cacao HOM05D006420 ORTHO05D008009 3.5e-91 339.0 228 71.5
Actinidia05697 Actinidia chinensis HOM05D006420 ORTHO05D008009 7.8e-91 337.8 279 62.7
Hund21694 Selenicereus undatus HOM05D006420 ORTHO05D008009 2.3e-90 336.3 229 71.6
COL.COLO4_13456 Corchorus olitorius HOM05D006420 ORTHO05D008009 3.9e-90 335.5 233 70.4
Lj9A86G16 Lonicera japonica HOM05D006420 ORTHO05D008009 5.0e-90 335.1 275 62.9
Cc02_g33350 Coffea canephora HOM05D006420 ORTHO05D008009 8.6e-90 334.3 229 71.6
TAR365G0270 Trochodendron aralioides HOM05D006420 ORTHO05D008009 1.5e-89 333.6 237 71.7
PGR083G0891 Punica granatum HOM05D006420 ORTHO05D008009 1.9e-89 333.2 275 60.7
Lj9A85G78 Lonicera japonica HOM05D006420 ORTHO05D008009 2.5e-89 332.8 275 61.8
GSVIVG01000081001 Vitis vinifera HOM05D006420 ORTHO05D008009 4.3e-89 332.0 238 68.5
CSS0034260 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 7.3e-89 331.3 275 61.5
Duzib177G0348 Durio zibethinus HOM05D006420 ORTHO05D008009 2.8e-88 329.3 224 71.0
Nn1g02269 Nelumbo nucifera HOM05D006420 ORTHO05D008009 2.8e-88 329.3 237 68.4
Nitab4.5_0000137g0140 Nicotiana tabacum HOM05D006420 ORTHO05D008009 3.6e-88 328.9 260 63.8
CSS0037657 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 4.7e-88 328.6 275 61.1
Solyc01g099130.3 Solanum lycopersicum HOM05D006420 ORTHO05D008009 4.7e-88 328.6 260 65.8
Sopen01g042690 Solanum pennellii HOM05D006420 ORTHO05D008009 4.7e-88 328.6 260 65.8
Peaxi162Scf00037g00513 Petunia axillaris HOM05D006420 ORTHO05D008009 1.1e-87 327.4 227 69.6
CAN.G1034.41 Capsicum annuum HOM05D006420 ORTHO05D008009 1.8e-87 326.6 258 64.3
PGSC0003DMG400024687 Solanum tuberosum HOM05D006420 ORTHO05D008009 2.3e-87 326.2 260 64.6
Gohir.A08G210900 Gossypium hirsutum HOM05D006420 ORTHO05D008009 3.1e-87 325.9 228 69.3
Gohir.D08G227700 Gossypium hirsutum HOM05D006420 ORTHO05D008009 3.1e-87 325.9 228 69.3
Gorai.004G241900 Gossypium raimondii HOM05D006420 ORTHO05D008009 3.1e-87 325.9 228 69.3
THA.LOC104820863 Tarenaya hassleriana HOM05D006420 ORTHO05D008009 1.2e-86 323.9 246 65.0
EL10Ac4g09358 Beta vulgaris HOM05D006420 ORTHO05D008009 5.8e-86 321.6 244 64.3
CiPaw.07G020700 Carya illinoinensis HOM05D006420 ORTHO05D008009 9.8e-86 320.9 224 70.1
CANSAT54G1557 Cannabis sativa HOM05D006420 ORTHO05D008009 1.3e-85 320.5 238 66.8
RhsimUnG0226900 Rhododendron simsii HOM05D006420 ORTHO05D008009 1.3e-85 320.5 248 64.5
Aqoxy5G00493 Aquilegia oxysepala HOM05D006420 ORTHO05D008009 1.7e-85 320.1 283 58.0
Prupe.6G324800 Prunus persica HOM05D006420 ORTHO05D008009 2.9e-85 319.3 259 62.9
Nn4g26277 Nelumbo nucifera HOM05D006420 ORTHO05D008009 4.9e-85 318.5 236 65.3
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 1.9e-84 316.6 235 63.0
vmacro05011 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 2.4e-84 316.2 219 70.3
Cfa006594 Carpinus fangiana HOM05D006420 ORTHO05D008009 3.2e-84 315.8 219 69.9
TWI56G0424 Tripterygium wilfordii HOM05D006420 ORTHO05D008009 4.1e-84 315.5 232 67.2
Sc06g0003280 Simmondsia chinensis HOM05D006420 ORTHO05D008009 1.2e-83 313.9 224 67.9
FAN14G2531 Fragaria x ananassa HOM05D006420 ORTHO05D008009 2.1e-83 313.2 249 63.1
RcHm_v2.0_Chr3g0454981 Rosa chinensis HOM05D006420 ORTHO05D008009 2.1e-83 313.2 237 65.8
Ciclev10002177m.g Citrus clementina HOM05D006420 ORTHO05D008009 2.7e-83 312.8 222 68.5
AUR62000819 Chenopodium quinoa HOM05D006420 ORTHO05D008009 3.5e-83 312.4 255 62.4
FAN09G3808 Fragaria x ananassa HOM05D006420 ORTHO05D008009 3.5e-83 312.4 250 63.2
Ah.04g160290 Amaranthus hybridus HOM05D006420 ORTHO05D008009 4.6e-83 312.0 222 68.0
Cpa.g.sc48.61 Carica papaya HOM05D006420 ORTHO05D008009 7.8e-83 311.2 228 64.9
Duzib106G1877 Durio zibethinus HOM05D006420 ORTHO05D008009 7.8e-83 311.2 224 67.9
Thhalv10023646m.g Eutrema salsugineum HOM05D006420 ORTHO05D008009 7.8e-83 311.2 230 64.8
FvH4_6g06020 Fragaria vesca HOM05D006420 ORTHO05D008009 7.8e-83 311.2 237 64.6
FAN05G3282 Fragaria x ananassa HOM05D006420 ORTHO05D008009 5.6e-81 305.1 237 64.1
QL03p007116 Quercus lobata HOM05D006420 ORTHO05D008009 5.6e-81 305.1 241 66.0
MD12G1218500 Malus domestica HOM05D006420 ORTHO05D008009 7.3e-81 304.7 271 58.3
Cfa006595 Carpinus fangiana HOM05D006420 ORTHO05D008009 9.5e-81 304.3 218 68.3
DCAR_029409 Daucus carota HOM05D006420 ORTHO05D008009 9.5e-81 304.3 224 64.7
BcaC06g31763 Brassica carinata HOM05D006420 ORTHO05D008009 1.2e-80 303.9 237 62.4
MD04G1204800 Malus domestica HOM05D006420 ORTHO05D008009 1.6e-80 303.5 222 66.7
Phvul.007G179700 Phaseolus vulgaris HOM05D006420 ORTHO05D008009 2.8e-80 302.8 236 63.1
AUR62005152 Chenopodium quinoa HOM05D006420 ORTHO05D008009 3.6e-80 302.4 288 55.9
Atru.chr2.393 Acer truncatum HOM05D006420 ORTHO05D008009 4.7e-80 302.0 233 61.4
FAN02G2504 Fragaria x ananassa HOM05D006420 ORTHO05D008009 4.7e-80 302.0 233 64.4
BcaC02g10755 Brassica carinata HOM05D006420 ORTHO05D008009 1.8e-79 300.1 237 62.4
C04p25420 Brassica napus HOM05D006420 ORTHO05D008009 1.8e-79 300.1 237 62.4
BolC4t24060H Brassica oleracea HOM05D006420 ORTHO05D008009 1.8e-79 300.1 237 62.4
Ca_10114_v3 Cicer arietinum L. HOM05D006420 ORTHO05D008009 1.8e-79 300.1 227 64.8
SGA_v2.0_scaffold81G26063 Striga asiatica HOM05D006420 ORTHO05D000105 2.3e-79 299.7 472 41.7
Lalb_Chr21g0310681 Lupinus albus HOM05D006420 ORTHO05D008009 5.2e-79 298.5 222 64.9
A03p68650 Brassica napus HOM05D006420 ORTHO05D008009 6.8e-79 298.1 240 60.4
BraSC39t46193Z Brassica rapa HOM05D006420 ORTHO05D008009 6.8e-79 298.1 240 60.4
PSO210G7816 Papaver somniferum HOM05D006420 ORTHO05D008009 6.8e-79 298.1 228 64.5
Sed0005627 Sechium edule HOM05D006420 ORTHO05D008009 6.8e-79 298.1 280 57.5
TPR.G6113 Trifolium pratense HOM05D006420 ORTHO05D008009 8.9e-79 297.7 238 62.2
FAN05G1000 Fragaria x ananassa HOM05D006420 ORTHO05D008009 1.5e-78 297.0 253 60.5
Psat6g150480 Pisum sativum HOM05D006420 ORTHO05D008009 2.0e-78 296.6 275 56.0
VMungo0720G1765 Vigna mungo HOM05D006420 ORTHO05D008009 2.0e-78 296.6 222 64.9
Glyma.10G154000 Glycine max HOM05D006420 ORTHO05D008009 3.4e-78 295.8 232 61.2
arahy.Tifrunner.gnm1.ann1.GHU2GX Arachis hypogaea HOM05D006420 ORTHO05D008009 7.6e-78 294.7 223 65.5
Glyma.20G234300 Glycine max HOM05D006420 ORTHO05D008009 1.3e-77 293.9 236 60.6
HPP92_020377 Vanilla planifolia HOM05D006420 ORTHO05D008009 1.3e-77 293.9 270 57.8
arahy.Tifrunner.gnm1.ann1.7ESY4D Arachis hypogaea HOM05D006420 ORTHO05D008009 1.7e-77 293.5 223 65.5
HanXRQChr16g0524621 Helianthus annuus HOM05D006420 ORTHO05D008009 1.7e-77 293.5 218 66.5
CsaV3_2G005340 Cucumis sativus L. HOM05D006420 ORTHO05D008009 2.2e-77 293.1 281 57.3
Medtr1g082950 Medicago truncatula HOM05D006420 ORTHO05D008009 2.9e-77 292.7 227 63.9
ATR0332G062 Amborella trichopoda HOM05D006420 ORTHO05D008009 6.4e-77 291.6 277 53.1
ClCG02G015760 Citrullus lanatus HOM05D006420 ORTHO05D008009 1.1e-76 290.8 248 60.1
SpUn0004_0090 Schrenkiella parvula HOM05D006420 ORTHO05D008009 9.2e-76 287.7 221 63.3
CARHR287540 Cardamine hirsuta HOM05D006420 ORTHO05D008009 1.6e-75 287.0 222 62.6
Lj5g0015213 Lotus japonicus HOM05D006420 ORTHO05D008009 1.6e-75 287.0 228 64.0
ECA232G4325 Erigeron canadensis HOM05D006420 ORTHO05D008009 3.0e-74 282.7 217 64.1
Carub.0002s0818 Capsella rubella HOM05D006420 ORTHO05D008009 8.6e-74 281.2 222 61.3
AL1G65580 Arabidopsis lyrata HOM05D006420 ORTHO05D008009 4.3e-73 278.9 221 61.1
AT1G55000 Arabidopsis thaliana HOM05D006420 ORTHO05D008009 7.3e-73 278.1 221 61.1
Potri.013G021600 Populus trichocarpa HOM05D006420 ORTHO05D008009 7.3e-73 278.1 209 64.6
MBI04_g29616_MAGBIO Magnolia biondii HOM05D006420 ORTHO05D008009 1.4e-71 273.9 185 69.2
Sabra13G0024000 Salix brachista HOM05D006420 ORTHO05D008009 3.1e-71 272.7 212 62.7
Haze_04190 Corylus avellana HOM05D006420 ORTHO05D008009 2.2e-69 266.5 318 47.2
Nitab4.5_0005541g0070 Nicotiana tabacum HOM05D006420 ORTHO05D008009 2.9e-69 266.2 260 55.0
Zm00001eb054020 Zea mays HOM05D006420 ORTHO05D008009 1.0e-66 257.7 208 56.2
Os03g0699600 Oryza sativa ssp. japonica HOM05D006420 ORTHO05D008009 3.3e-65 252.7 208 56.7
Pp3c16_5370 Physcomitrium patens HOM05D006420 ORTHO05D008009 9.9e-62 241.1 208 58.7
MELO3C004253.2 Cucumis melo HOM05D000208 ORTHO05D000130 3.0e-58 229.6 208 59.1
AagrBONN_evm.TU.Sc2ySwM_368.542 Anthoceros agrestis HOM05D006420 ORTHO05D008009 1.1e-49 201.1 213 48.4
SMO356G0643 Selaginella moellendorffii HOM05D006420 ORTHO05D008009 1.6e-48 197.2 209 47.4
Potri.005G032100 Populus trichocarpa HOM05D006420 ORTHO05D008009 7.6e-46 188.3 158 57.6
Rhsim07G0185100 Rhododendron simsii HOM05D006420 ORTHO05D008009 2.7e-43 179.9 125 70.4
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 5.7e-41 172.2 151 58.3
MD10G1167700 Malus domestica HOM05D006420 ORTHO05D008009 8.2e-40 168.3 117 68.4
QL03p007970 Quercus lobata HOM05D006420 ORTHO05D008009 1.3e-37 161.0 116 69.8
QL03p007144 Quercus lobata HOM05D006420 ORTHO05D008009 1.1e-36 157.9 117 70.1
Eucgr.B01859 Eucalyptus grandis HOM05D006420 ORTHO05D008009 1.0e-34 151.4 105 68.6
Eucgr.B01949 Eucalyptus grandis HOM05D006420 ORTHO05D008009 1.3e-34 151.0 110 66.4
Eucgr.B01946 Eucalyptus grandis HOM05D006420 ORTHO05D008009 9.7e-33 144.8 103 67.0
vmacro23281 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 9.7e-33 144.8 99 71.7
Sabra05G0034600 Salix brachista HOM05D006420 ORTHO05D008009 3.6e-27 126.3 130 50.0
Cre16.g667100 Chlamydomonas reinhardtii HOM05D006420 ORTHO05D008009 4.8e-24 115.9 229 33.2
SEGI_28170 Sequoiadendron giganteum HOM05D006420 ORTHO05D008009 4.1e-23 112.8 83 65.1
vmacro23282 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 7.7e-14 82.0 104 47.1
QL03p007977 Quercus lobata HOM05D006420 ORTHO05D008009 5.0e-13 79.3 76 52.6
QL03p007137 Quercus lobata HOM05D006420 ORTHO05D008009 1.5e-12 77.8 67 58.2
SalBow5G0658 Salvia bowleyana HOM05D041286 ORTHO05D008009 2.8e-08 63.5 47 63.8
Thhalv10024156m.g Eutrema salsugineum HOM05D006420 ORTHO05D008009 1.4e-07 61.2 84 38.1
SalBow5G3982 Salvia bowleyana HOM05D002652 ORTHO05D002739 9.1e-07 58.5 41 65.9


User provided reference genes

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