Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02011 Erythranthe guttata HOM05D006774 ORTHO05D008411 7.5e-254 880.2 487 100.0
MSTRG.20428 Avicennia marina HOM05D006774 ORTHO05D008411 7.1e-172 607.8 494 70.9
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 8.5e-157 557.8 491 60.9
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 4.8e-152 542.0 495 64.2
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 2.4e-151 539.7 495 62.0
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 2.5e-148 529.6 446 62.3
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 1.8e-143 513.5 428 64.3
CSS0040526 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 2.7e-131 473.0 362 63.8
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 6.1e-131 471.9 444 55.2
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 2.6e-129 466.5 443 56.2
Lsat_1_v5_gn_9_86761 Lactuca sativa HOM05D006774 ORTHO05D008411 9.8e-129 464.5 458 51.7
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 2.8e-128 463.0 454 52.4
CiPaw.10G139100 Carya illinoinensis HOM05D006774 ORTHO05D008411 4.1e-127 459.1 506 49.6
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 1.5e-124 450.7 449 54.3
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 9.5e-124 448.0 438 55.3
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 1.6e-123 447.2 451 52.3
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 2.1e-123 446.8 440 54.8
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 8.0e-123 444.9 441 53.1
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 1.0e-122 444.5 419 57.8
Lj9C83T13 Lonicera japonica HOM05D006774 ORTHO05D008411 1.0e-122 444.5 358 62.8
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 1.8e-122 443.7 449 51.4
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 3.0e-122 443.0 433 51.0
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 3.0e-122 443.0 452 51.5
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 2.0e-121 440.3 493 51.1
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 2.6e-121 439.9 451 51.7
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 5.7e-121 438.7 449 52.3
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 9.8e-121 438.0 437 55.6
RhsimUnG0226700 Rhododendron simsii HOM05D006774 ORTHO05D008411 2.2e-120 436.8 357 62.5
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 3.7e-120 436.0 447 50.3
vmacro05013 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 1.1e-119 434.5 358 63.4
vmacro23279 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 1.1e-119 434.5 358 63.4
FAN09G1854 Fragaria x ananassa HOM05D006774 ORTHO05D008411 7.0e-119 431.8 412 55.6
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 9.2e-119 431.4 452 53.3
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 9.2e-119 431.4 445 53.3
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.2e-118 431.0 439 54.4
Lj9C82T10 Lonicera japonica HOM05D006774 ORTHO05D008411 1.2e-118 431.0 343 63.3
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 2.0e-118 430.3 444 54.3
HanXRQChr11g0338551 Helianthus annuus HOM05D006774 ORTHO05D008411 1.3e-117 427.6 423 54.1
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 1.7e-117 427.2 450 52.7
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 2.3e-117 426.8 431 55.0
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 6.6e-117 425.2 442 55.0
Lalb_Chr18g0045661 Lupinus albus HOM05D006774 ORTHO05D008411 1.2e-115 421.0 443 54.0
Ca_05814_v3 Cicer arietinum L. HOM05D006774 ORTHO05D008411 3.6e-115 419.5 423 55.1
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 3.6e-115 419.5 431 52.9
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 4.7e-115 419.1 496 49.4
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 1.0e-114 417.9 444 51.6
Sed0009699 Sechium edule HOM05D006774 ORTHO05D008411 1.8e-114 417.2 450 50.0
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 3.0e-114 416.4 496 49.2
Duzib128G0809 Durio zibethinus HOM05D006774 ORTHO05D008411 4.0e-114 416.0 456 52.6
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 6.8e-114 415.2 421 54.9
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 6.8e-114 415.2 423 54.6
FAN05G2700 Fragaria x ananassa HOM05D006774 ORTHO05D008411 6.8e-114 415.2 395 55.4
Haze_04191 Corylus avellana HOM05D006774 ORTHO05D008411 2.0e-113 413.7 365 57.8
FvH4_6g06010 Fragaria vesca HOM05D006774 ORTHO05D008411 3.4e-113 412.9 412 53.4
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 3.4e-113 412.9 432 53.2
FAN05G0244 Fragaria x ananassa HOM05D006774 ORTHO05D008411 7.5e-113 411.8 398 55.3
Lj9C84T1 Lonicera japonica HOM05D006774 ORTHO05D008411 1.3e-112 411.0 329 61.4
BcaC09g49602 Brassica carinata HOM05D006774 ORTHO05D008411 2.2e-112 410.2 439 50.1
Lj1g0013332 Lotus japonicus HOM05D006774 ORTHO05D008411 3.7e-112 409.5 413 52.3
C01p34610 Brassica napus HOM05D006774 ORTHO05D008411 1.4e-111 407.5 439 49.9
BolC1t03432H Brassica oleracea HOM05D006774 ORTHO05D008411 1.4e-111 407.5 439 49.9
RcHm_v2.0_Chr3g0454971 Rosa chinensis HOM05D006774 ORTHO05D008411 1.4e-111 407.5 394 54.6
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 1.8e-111 407.1 434 51.4
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 3.2e-111 406.4 436 51.8
AL1G65540 Arabidopsis lyrata HOM05D006774 ORTHO05D008411 4.1e-111 406.0 436 52.3
BraA01t02861Z Brassica rapa HOM05D006774 ORTHO05D008411 5.4e-111 405.6 439 49.9
Nn1g02268 Nelumbo nucifera HOM05D006774 ORTHO05D008411 1.2e-110 404.4 414 50.7
BcaB04g20150 Brassica carinata HOM05D006774 ORTHO05D008411 2.0e-110 403.7 432 50.0
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 2.0e-110 403.7 426 52.8
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 2.7e-110 403.3 444 49.8
A01p27210 Brassica napus HOM05D006774 ORTHO05D008411 3.5e-110 402.9 439 49.7
Carub.0002s0819 Capsella rubella HOM05D006774 ORTHO05D008411 3.5e-110 402.9 444 50.0
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 7.8e-110 401.7 439 47.2
Thhalv10023440m.g Eutrema salsugineum HOM05D006774 ORTHO05D008411 1.3e-109 401.0 439 49.4
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 1.7e-109 400.6 431 50.1
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 1.7e-109 400.6 431 50.1
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 1.1e-108 397.9 429 50.1
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 2.5e-108 396.7 418 52.9
Phvul.006G091800 Phaseolus vulgaris HOM05D006774 ORTHO05D008411 1.2e-107 394.4 393 52.4
CsaV3_1G038960 Cucumis sativus L. HOM05D006774 ORTHO05D008411 1.6e-107 394.0 431 49.2
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 8.9e-106 388.3 386 52.8
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 2.6e-105 386.7 433 50.8
AT1G54990 Arabidopsis thaliana HOM05D006774 ORTHO05D008411 1.1e-103 381.3 423 51.1
COL.COLO4_13460 Corchorus olitorius HOM05D006774 ORTHO05D008411 1.1e-103 381.3 346 55.8
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 9.5e-100 368.2 355 56.3
AUR62000820 Chenopodium quinoa HOM05D006774 ORTHO05D008411 1.6e-99 367.5 399 47.1
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 3.6e-99 366.3 388 48.7
unitig_736.g22755 Utricularia gibba HOM05D006774 ORTHO05D008411 5.4e-95 352.4 437 44.6
ECA236G1211 Erigeron canadensis HOM05D000208 ORTHO05D000130 7.1e-95 352.1 338 54.7
Psat0s3041g0040 Pisum sativum HOM05D006774 ORTHO05D008411 1.7e-93 347.4 360 52.5
Dinv40294 Davidia involucrata HOM05D006774 ORTHO05D008411 3.9e-93 346.3 321 61.7
Sabra13G0023900 Salix brachista HOM05D006774 ORTHO05D008411 1.9e-92 344.0 351 50.7
CDE05G2690 Ceratophyllum demersum HOM05D006774 ORTHO05D008411 4.3e-92 342.8 428 41.8
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 9.9e-89 331.6 345 51.6
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 2.5e-84 317.0 347 52.7
AUR62005151 Chenopodium quinoa HOM05D006774 ORTHO05D008411 6.6e-77 292.4 267 52.1
Actinidia05698 Actinidia chinensis HOM05D006774 ORTHO05D008411 2.3e-61 240.7 194 61.3
PSO478G2742 Papaver somniferum HOM05D006774 ORTHO05D008411 5.1e-61 239.6 305 44.3
Pp3c11_22860 Physcomitrium patens HOM05D006774 ORTHO05D008411 3.2e-55 220.3 452 31.0
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 3.5e-54 216.9 496 35.3
PSO782G1046 Papaver somniferum HOM05D006774 ORTHO05D008411 1.5e-52 211.5 294 43.5
Os11g0544100 Oryza sativa ssp. japonica HOM05D006774 ORTHO05D008411 3.3e-52 210.3 413 34.1
Zm00001eb197590 Zea mays HOM05D006774 ORTHO05D008411 2.9e-48 197.2 347 35.2
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 1.1e-47 195.3 183 54.6
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 3.0e-45 187.2 181 59.1
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 4.3e-44 183.3 181 54.7
Atru.chr12.689 Acer truncatum HOM05D006774 ORTHO05D008411 1.1e-39 168.7 199 45.7
SMO145G0196 Selaginella moellendorffii HOM05D006774 ORTHO05D008411 9.7e-36 155.6 377 31.0
HPP92_006104 Vanilla planifolia HOM05D006774 ORTHO05D008411 1.1e-34 152.1 205 43.4
Oeu035485.2 Olea europaea HOM05D006774 ORTHO05D001341 9.4e-23 112.5 79 72.2
Nitab4.5_0010934g0020 Nicotiana tabacum HOM05D006774 ORTHO05D008411 5.9e-09 66.6 58 46.6
Oeu051834.1 Olea europaea HOM05D006774 ORTHO05D008411 3.8e-08 63.9 82 63.4
CSS0005750 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 1.1e-07 62.4 84 56.0
vmacro23280 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 3.3e-07 60.8 88 51.1
vmacro05012 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 7.2e-07 59.7 88 50.0


User provided reference genes

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