Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01944 Erythranthe guttata HOM05D006992 ORTHO05D008752 1.1e-107 393.3 201 100.0
Migut.N01946 Erythranthe guttata HOM05D006992 ORTHO05D008752 2.7e-77 292.4 218 71.1
Actinidia33837 Actinidia chinensis HOM05D006992 ORTHO05D008752 8.0e-69 264.2 199 67.3
Nn3g21348 Nelumbo nucifera HOM05D006992 ORTHO05D008752 4.0e-68 261.9 192 68.2
Oeu012474.1 Olea europaea HOM05D006992 ORTHO05D008752 4.0e-68 261.9 192 68.8
Ciclev10002483m.g Citrus clementina HOM05D006992 ORTHO05D008752 3.4e-67 258.8 207 65.7
CAN.G424.13 Capsicum annuum HOM05D006992 ORTHO05D008752 4.8e-66 255.0 192 67.2
Sed0003148 Sechium edule HOM05D006992 ORTHO05D008752 4.8e-66 255.0 200 66.0
SGA_v2.0_scaffold80G25908 Striga asiatica HOM05D006992 ORTHO05D008752 6.3e-66 254.6 205 65.4
CiPaw.07G008900 Carya illinoinensis HOM05D006992 ORTHO05D008752 1.4e-65 253.4 202 63.4
Eucgr.B01740 Eucalyptus grandis HOM05D006992 ORTHO05D008752 1.4e-65 253.4 190 67.4
Potri.013G034100 Populus trichocarpa HOM05D006992 ORTHO05D008752 1.4e-65 253.4 196 64.8
CSS0031345 Camellia sinensis var. sinensis HOM05D006992 ORTHO05D008752 3.1e-65 252.3 197 66.0
Cc02_g31290 Coffea canephora HOM05D006992 ORTHO05D008752 3.1e-65 252.3 179 69.8
Gohir.A13G106100 Gossypium hirsutum HOM05D006992 ORTHO05D008752 3.1e-65 252.3 202 65.8
TAR633G1762 Trochodendron aralioides HOM05D006992 ORTHO05D008752 3.1e-65 252.3 198 63.6
SalBow3G4063 Salvia bowleyana HOM05D006992 ORTHO05D008752 4.1e-65 251.9 221 62.4
Prupe.6G337300 Prunus persica HOM05D006992 ORTHO05D008752 5.4e-65 251.5 191 64.4
MD12G1234200 Malus domestica HOM05D006992 ORTHO05D008752 7.0e-65 251.1 192 65.1
Gohir.D13G108900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 9.1e-65 250.8 202 65.8
Gorai.013G122400 Gossypium raimondii HOM05D006992 ORTHO05D008752 9.1e-65 250.8 202 65.3
CiPaw.08G178000 Carya illinoinensis HOM05D006992 ORTHO05D008752 4.5e-64 248.4 192 63.5
FvH4_6g03930 Fragaria vesca HOM05D006992 ORTHO05D008752 4.5e-64 248.4 198 62.6
Sc09g0003710 Simmondsia chinensis HOM05D006992 ORTHO05D008752 4.5e-64 248.4 197 62.4
Thecc.05G291400 Theobroma cacao HOM05D006992 ORTHO05D008752 7.7e-64 247.7 194 66.5
RcHm_v2.0_Chr3g0452481 Rosa chinensis HOM05D006992 ORTHO05D008752 2.3e-63 246.1 197 62.4
Solyc02g079130.3 Solanum lycopersicum HOM05D006992 ORTHO05D008752 2.9e-63 245.7 203 61.6
Sopen02g023930 Solanum pennellii HOM05D006992 ORTHO05D008752 3.8e-63 245.4 203 61.6
PGSC0003DMG400022358 Solanum tuberosum HOM05D006992 ORTHO05D008752 3.8e-63 245.4 191 64.9
ClCG03G016340 Citrullus lanatus HOM05D006992 ORTHO05D008752 5.0e-63 245.0 189 64.6
Lsat_1_v5_gn_2_67081 Lactuca sativa HOM05D006992 ORTHO05D008752 5.0e-63 245.0 218 60.1
CANSAT54G1892 Cannabis sativa HOM05D006992 ORTHO05D008752 6.6e-63 244.6 192 63.5
vmacro19674 Vaccinium macrocarpon HOM05D006992 ORTHO05D008752 6.6e-63 244.6 186 68.8
MELO3C015384.2 Cucumis melo HOM05D006992 ORTHO05D008752 8.6e-63 244.2 189 64.6
Lj1g0025869 Lotus japonicus HOM05D006992 ORTHO05D008752 8.6e-63 244.2 201 62.2
CsaV3_1G039620 Cucumis sativus L. HOM05D006992 ORTHO05D008752 1.5e-62 243.4 189 64.0
Atru.chr2.657 Acer truncatum HOM05D006992 ORTHO05D008752 1.9e-62 243.0 191 63.9
Glyma.19G241400 Glycine max HOM05D006992 ORTHO05D008752 1.9e-62 243.0 189 62.4
CDE02G3150 Ceratophyllum demersum HOM05D006992 ORTHO05D008752 4.2e-62 241.9 190 63.2
THA.LOC104818652 Tarenaya hassleriana HOM05D006992 ORTHO05D008752 7.2e-62 241.1 193 62.2
QL03p000176 Quercus lobata HOM05D006992 ORTHO05D008752 1.2e-61 240.4 195 61.5
Gohir.A11G256900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.6e-61 240.0 196 61.2
TWI36G0139 Tripterygium wilfordii HOM05D006992 ORTHO05D008752 1.6e-61 240.0 192 64.1
PGR083G1999 Punica granatum HOM05D006992 ORTHO05D008752 2.1e-61 239.6 193 61.7
Rhsim05G0148900 Rhododendron simsii HOM05D006992 ORTHO05D008752 2.1e-61 239.6 188 66.0
Sabra13G0033300 Salix brachista HOM05D006992 ORTHO05D008752 2.8e-61 239.2 191 62.3
TPR.G6916 Trifolium pratense HOM05D006992 ORTHO05D008752 2.8e-61 239.2 192 62.5
FAN14G0596 Fragaria x ananassa HOM05D006992 ORTHO05D008752 3.6e-61 238.8 192 62.5
Manes.09G157800 Manihot esculenta HOM05D006992 ORTHO05D008752 3.6e-61 238.8 193 61.7
Phvul.006G097900 Phaseolus vulgaris HOM05D006992 ORTHO05D008752 4.7e-61 238.4 194 60.3
HanXRQChr14g0445751 Helianthus annuus HOM05D006992 ORTHO05D008752 6.1e-61 238.0 186 63.4
Cfa006481 Carpinus fangiana HOM05D006992 ORTHO05D008752 8.0e-61 237.7 192 62.0
PSO210G3204 Papaver somniferum HOM05D006992 ORTHO05D008752 8.0e-61 237.7 192 62.0
Gorai.007G286500 Gossypium raimondii HOM05D006992 ORTHO05D008752 1.0e-60 237.3 196 60.7
Nitab4.5_0004284g0080 Nicotiana tabacum HOM05D006992 ORTHO05D008752 1.0e-60 237.3 201 63.2
FAN09G1577 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.4e-60 236.9 193 62.2
COL.COLO4_13636 Corchorus olitorius HOM05D004868 ORTHO05D006030 1.8e-60 236.5 191 62.8
PSO832G0773 Papaver somniferum HOM05D006992 ORTHO05D008752 1.8e-60 236.5 192 61.5
Ca_09397_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 2.3e-60 236.1 194 60.8
Hund06999 Selenicereus undatus HOM05D006992 ORTHO05D008752 2.3e-60 236.1 188 64.9
AL3G15290 Arabidopsis lyrata HOM05D006992 ORTHO05D008752 5.2e-60 235.0 193 61.1
Nitab4.5_0001410g0140 Nicotiana tabacum HOM05D006992 ORTHO05D008752 5.2e-60 235.0 201 63.2
AT3G04950 Arabidopsis thaliana HOM05D006992 ORTHO05D008752 8.9e-60 234.2 194 60.3
FAN05G0877 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.2e-59 233.8 193 61.1
Thhalv10021439m.g Eutrema salsugineum HOM05D006992 ORTHO05D008752 1.5e-59 233.4 193 60.6
Psat0s2796g0040 Pisum sativum HOM05D006992 ORTHO05D008752 2.0e-59 233.0 209 56.9
Carub.0003s0417 Capsella rubella HOM05D006992 ORTHO05D008752 2.6e-59 232.6 193 61.1
Peaxi162Scf00103g00035 Petunia axillaris HOM05D006992 ORTHO05D008752 2.6e-59 232.6 177 62.7
ECA238G1326 Erigeron canadensis HOM05D006992 ORTHO05D008752 1.3e-58 230.3 175 66.9
FAN05G5181 Fragaria x ananassa HOM05D006992 ORTHO05D008752 1.3e-58 230.3 192 60.4
BcaB04g19286 Brassica carinata HOM05D006992 ORTHO05D008752 2.2e-58 229.6 193 59.1
DCAR_022834 Daucus carota HOM05D006992 ORTHO05D008752 2.2e-58 229.6 188 62.2
EL10Ac4g09207 Beta vulgaris HOM05D006992 ORTHO05D008752 2.8e-58 229.2 192 61.5
CARHR079260 Cardamine hirsuta HOM05D006992 ORTHO05D008752 2.8e-58 229.2 193 59.6
ATR0706G207 Amborella trichopoda HOM05D006992 ORTHO05D008752 3.7e-58 228.8 208 56.7
BcaC01g04339 Brassica carinata HOM05D006992 ORTHO05D008752 3.7e-58 228.8 193 58.5
GSVIVG01021889001 Vitis vinifera HOM05D006992 ORTHO05D008752 3.7e-58 228.8 175 63.4
Aqoxy5G00680 Aquilegia oxysepala HOM05D006992 ORTHO05D008752 8.3e-58 227.6 193 61.1
AUR62000954 Chenopodium quinoa HOM05D006992 ORTHO05D008752 8.3e-58 227.6 202 58.9
Medtr7g114390 Medicago truncatula HOM05D006992 ORTHO05D008752 8.3e-58 227.6 202 55.9
QL03p000513 Quercus lobata HOM05D006992 ORTHO05D008752 1.1e-57 227.3 218 55.0
Sp3g03770 Schrenkiella parvula HOM05D006992 ORTHO05D008752 3.1e-57 225.7 190 58.9
unitig_746.g26840 Utricularia gibba HOM05D006992 ORTHO05D008752 5.4e-57 224.9 145 75.2
Lalb_Chr18g0045231 Lupinus albus HOM05D006992 ORTHO05D008752 9.2e-57 224.2 196 56.1
FAN02G1922 Fragaria x ananassa HOM05D000167 ORTHO05D000640 3.5e-56 222.2 193 59.6
arahy.Tifrunner.gnm1.ann1.ZZK2AU Arachis hypogaea HOM05D006992 ORTHO05D008752 1.0e-55 220.7 196 57.1
BraA03t12570Z Brassica rapa HOM05D006992 ORTHO05D008752 3.3e-54 215.7 188 57.4
Dinv17742 Davidia involucrata HOM05D004868 ORTHO05D006030 4.3e-54 215.3 145 73.1
C03p41330 Brassica napus HOM05D003164 ORTHO05D003575 1.2e-53 213.8 187 57.2
A03p33950 Brassica napus HOM05D003164 ORTHO05D003575 1.6e-53 213.4 187 57.2
BolC3t16415H Brassica oleracea HOM05D006992 ORTHO05D008752 2.8e-53 212.6 188 56.4
Os06g0298500 Oryza sativa ssp. japonica HOM05D006992 ORTHO05D008752 8.0e-53 211.1 194 56.2
arahy.Tifrunner.gnm1.ann1.26USVU Arachis hypogaea HOM05D006992 ORTHO05D008752 3.1e-52 209.1 186 57.5
HPP92_017993 Vanilla planifolia HOM05D006992 ORTHO05D008752 2.0e-51 206.5 184 57.1
HPP92_026697 Vanilla planifolia HOM05D006992 ORTHO05D008752 9.8e-51 204.1 183 56.8
SEGI_08689 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 3.7e-50 202.2 191 55.0
AUR62005014 Chenopodium quinoa HOM05D006992 ORTHO05D008752 1.1e-49 200.7 175 59.4
Zm00001eb381040 Zea mays HOM05D006992 ORTHO05D008752 1.4e-49 200.3 185 57.8
Haze_04310 Corylus avellana HOM05D006992 ORTHO05D008752 2.0e-48 196.4 287 42.5
Lj7A478T92 Lonicera japonica HOM05D006992 ORTHO05D008752 9.5e-46 187.6 273 41.8
Gohir.D11G266700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 2.3e-39 166.4 153 55.6
Ca_30169_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 3.0e-39 166.0 150 57.3
Glyma.03G244000 Glycine max HOM05D006992 ORTHO05D008752 6.6e-39 164.9 154 55.2
VMungo0540G1333 Vigna mungo HOM05D006992 ORTHO05D008752 8.6e-39 164.5 150 55.3
Cpa.g.sc117.39 Carica papaya HOM05D004868 ORTHO05D006030 5.6e-38 161.8 101 78.2
Gohir.D03G094700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.5e-35 153.7 98 71.4
PSO210G4341 Papaver somniferum HOM05D006992 ORTHO05D008752 3.4e-35 152.5 161 52.8
PSO339G2351 Papaver somniferum HOM05D006992 ORTHO05D008752 3.4e-35 152.5 161 52.2
PSO384G0024 Papaver somniferum HOM05D006992 ORTHO05D008752 8.3e-34 147.9 159 51.6
SEGI_13740 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 5.2e-28 128.6 157 45.9
Gorai.001G169400 Gossypium raimondii HOM05D006992 ORTHO05D008752 6.4e-26 121.7 78 73.1
Gohir.D07G141600 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.9e-25 120.2 78 71.8
Gohir.D12G044200 Gossypium hirsutum HOM05D006992 ORTHO05D008752 4.2e-25 119.0 78 71.8
Aa31LG5G15340 Aethionema arabicum HOM05D006992 ORTHO05D008752 5.4e-25 118.6 78 69.2
FAN05G0951 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.6e-24 117.1 153 45.8
SMO361G0250 Selaginella moellendorffii HOM05D006992 ORTHO05D008752 6.4e-18 95.1 182 36.8
Gohir.D03G082200 Gossypium hirsutum HOM05D006992 ORTHO05D008752 3.9e-15 85.9 56 71.4
RcHm_v2.0_Chr1g0321781 Rosa chinensis HOM05D006992 ORTHO05D008752 5.6e-14 82.0 61 60.7
RcHm_v2.0_Chr6g0246461 Rosa chinensis HOM05D006992 ORTHO05D008752 1.6e-13 80.5 61 59.0
RcHm_v2.0_Chr3g0452521 Rosa chinensis HOM05D006992 ORTHO05D008752 4.8e-13 79.0 88 47.7
VMungo0331G0785 Vigna mungo HOM05D006992 ORTHO05D008752 1.3e-10 70.9 77 46.8
Gorai.010G111000 Gossypium raimondii HOM05D001408 ORTHO05D001312 4.9e-10 68.9 40 75.0
Gohir.D06G096300 Gossypium hirsutum HOM05D001408 ORTHO05D001312 4.2e-09 65.9 40 70.0
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 4.2e-09 65.9 39 74.4
Sp3g03780 Schrenkiella parvula HOM05D000160 ORTHO05D000914 1.8e-07 60.5 39 69.2
SGA_v2.0_scaffold243G44307 Striga asiatica HOM05D060893 ORTHO05D008752 1.5e-06 57.4 82 45.1
RcHm_v2.0_Chr3g0452531 Rosa chinensis HOM05D006992 ORTHO05D008752 5.6e-06 55.5 35 74.3


User provided reference genes

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