Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 5.2e-97 357.8 195 100.0
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 9.8e-72 273.9 218 72.0
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 2.4e-70 269.2 222 70.3
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 3.1e-70 268.9 216 70.4
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 4.3e-67 258.5 199 70.9
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 4.3e-67 258.5 199 70.9
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 4.0e-65 251.9 214 66.8
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 9.8e-64 247.3 214 65.4
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 3.7e-63 245.4 214 64.5
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 2.4e-62 242.7 213 63.8
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 7.8e-61 237.7 214 62.1
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.3e-60 236.9 214 62.1
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 8.6e-60 234.2 213 64.3
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 1.1e-59 233.8 213 62.4
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.1e-59 233.8 214 61.2
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 1.1e-59 233.8 215 63.7
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 1.5e-59 233.4 210 63.3
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 1.5e-59 233.4 220 61.8
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 2.5e-59 232.6 214 63.6
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 2.5e-59 232.6 212 63.2
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 4.3e-59 231.9 214 62.1
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 4.3e-59 231.9 214 64.0
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 9.5e-59 230.7 229 61.1
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 8.0e-58 227.6 212 63.2
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 8.0e-58 227.6 207 62.3
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.1e-57 227.3 208 61.1
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 1.1e-57 227.3 219 62.1
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 1.4e-57 226.9 212 62.7
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 1.8e-57 226.5 212 62.7
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 2.3e-57 226.1 212 62.7
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 3.1e-57 225.7 215 60.0
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 4.0e-57 225.3 236 58.5
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 5.2e-57 224.9 215 59.5
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 5.2e-57 224.9 213 60.6
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 1.2e-56 223.8 188 64.4
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 2.0e-56 223.0 215 59.5
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 2.0e-56 223.0 216 60.2
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 4.4e-56 221.9 206 62.6
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 4.4e-56 221.9 206 62.6
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 7.5e-56 221.1 215 59.1
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 9.8e-56 220.7 210 60.5
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 1.3e-55 220.3 214 59.3
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 2.2e-55 219.5 241 56.4
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 2.9e-55 219.2 212 59.9
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 2.9e-55 219.2 212 60.4
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 3.7e-55 218.8 214 57.9
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 4.9e-55 218.4 214 57.5
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 6.4e-55 218.0 212 60.8
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.1e-54 217.2 145 74.5
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 1.1e-54 217.2 212 59.9
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.4e-54 216.9 145 74.5
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 1.9e-54 216.5 214 58.4
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 3.2e-54 215.7 145 74.5
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 3.2e-54 215.7 211 59.2
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 4.1e-54 215.3 214 58.9
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 4.1e-54 215.3 224 54.9
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 5.4e-54 214.9 211 59.2
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 5.4e-54 214.9 222 57.7
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 5.4e-54 214.9 212 59.0
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 2.7e-53 212.6 214 56.5
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 3.5e-53 212.2 217 57.6
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 7.8e-53 211.1 213 57.3
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 1.0e-52 210.7 291 46.4
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 1.0e-52 210.7 213 56.8
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 1.3e-52 210.3 221 55.7
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 1.3e-52 210.3 213 57.7
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 3.9e-52 208.8 209 57.9
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 6.6e-52 208.0 149 71.1
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 6.6e-52 208.0 220 55.9
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 1.1e-51 207.2 144 75.0
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 1.1e-51 207.2 143 71.3
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.1e-51 207.2 140 76.4
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 1.5e-51 206.8 211 58.8
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 4.3e-51 205.3 145 70.3
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 5.6e-51 204.9 203 58.1
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 5.6e-51 204.9 213 57.7
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 9.5e-51 204.1 179 61.5
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 9.5e-51 204.1 192 61.5
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 2.1e-50 203.0 219 53.4
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 4.7e-50 201.8 140 75.0
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 6.2e-50 201.4 151 68.2
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 8.1e-50 201.1 217 53.9
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 1.1e-49 200.7 204 56.9
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 2.3e-49 199.5 184 59.2
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 4.0e-49 198.7 223 52.5
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 5.2e-49 198.4 221 53.4
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 2.0e-48 196.4 145 71.0
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 3.4e-48 195.7 198 58.1
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.4e-48 195.7 144 68.1
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 4.4e-48 195.3 192 58.9
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 2.9e-47 192.6 143 68.5
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 9.2e-46 187.6 221 52.5
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 1.6e-45 186.8 181 58.0
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 1.0e-44 184.1 153 62.1
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 2.5e-43 179.5 122 74.6
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 2.8e-42 176.0 143 62.2
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 8.1e-42 174.5 211 53.6
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 7.1e-38 161.4 217 47.5
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.0e-36 156.0 158 55.7
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 3.1e-33 146.0 184 48.9
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 4.4e-32 142.1 145 57.2
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 2.9e-31 139.4 194 47.4
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 6.0e-29 131.7 90 71.1
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.8e-25 120.2 81 72.8
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 2.4e-25 119.8 214 38.3
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 5.3e-25 118.6 79 73.4
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 9.9e-24 114.4 179 40.8
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 1.9e-22 110.2 134 54.5
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 1.9e-22 110.2 192 40.1
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 2.4e-22 109.8 159 42.1
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 7.4e-19 98.2 71 69.0
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 1.2e-16 90.9 65 63.1
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 5.8e-16 88.6 70 67.1
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 5.8e-16 88.6 122 48.4
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 4.6e-13 79.0 62 69.4
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 2.5e-11 73.2 212 28.3
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 3.3e-11 72.8 53 66.0
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 7.6e-08 61.6 102 43.1
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 3.8e-07 59.3 73 52.1
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 1.9e-06 57.0 66 42.4


User provided reference genes

Program Settings