Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01854 Erythranthe guttata HOM05D002974 ORTHO05D002992 5.1e-70 267.7 143 100.0
MSTRG.28034 Avicennia marina HOM05D002974 ORTHO05D002992 1.1e-35 153.7 144 64.6
MSTRG.5073 Avicennia marina HOM05D002974 ORTHO05D002992 2.2e-28 129.4 148 58.8
SGA_v2.0_scaffold232G43495 Striga asiatica HOM05D002974 ORTHO05D002992 3.0e-25 119.0 132 56.8
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 4.3e-24 115.2 150 47.3
SalBow6G5116 Salvia bowleyana HOM05D002974 ORTHO05D002992 1.2e-23 113.6 116 57.8
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 3.1e-22 109.0 141 51.1
Oeu053079.1 Olea europaea HOM05D002974 ORTHO05D002992 1.2e-21 107.1 142 49.3
Oeu006786.1 Olea europaea HOM05D002974 ORTHO05D002992 3.4e-21 105.5 137 51.8
SGA_v2.0_scaffold43G16289 Striga asiatica HOM05D002974 ORTHO05D002992 4.4e-21 105.1 138 51.4
SalBow5G5227 Salvia bowleyana HOM05D002974 ORTHO05D002992 4.6e-18 95.1 128 51.6
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 1.1e-16 90.5 145 46.2
Oeu011571.1 Olea europaea HOM05D002974 ORTHO05D002992 2.1e-15 86.3 147 44.2
Migut.B01240 Erythranthe guttata HOM05D002974 ORTHO05D002992 3.6e-15 85.5 135 45.9
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 8.1e-15 84.3 161 39.1
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 3.1e-14 82.4 161 36.6
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 4.0e-14 82.0 136 41.9
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 1.5e-13 80.1 165 37.6
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 4.4e-13 78.6 132 40.9
QL07p010402 Quercus lobata HOM05D002974 ORTHO05D002992 7.5e-13 77.8 132 38.6
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 3.7e-12 75.5 141 38.3
Nitab4.5_0003481g0110 Nicotiana tabacum HOM05D002974 ORTHO05D002992 1.1e-11 73.9 150 38.0
unitig_26.g9507 Utricularia gibba HOM05D002974 ORTHO05D002992 1.1e-11 73.9 142 42.3
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 1.9e-11 73.2 158 37.3
Duzib106G1811 Durio zibethinus HOM05D002974 ORTHO05D002992 1.9e-11 73.2 138 39.9
Manes.04G157400 Manihot esculenta HOM05D002974 ORTHO05D002992 1.9e-11 73.2 132 36.4
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.4e-11 72.8 143 38.5
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 3.2e-11 72.4 139 38.8
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 5.4e-11 71.6 136 38.2
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 1.2e-10 70.5 143 37.8
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.6e-10 70.1 143 36.4
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.6e-10 70.1 146 38.4
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 2.1e-10 69.7 126 38.9
Migut.B00886 Erythranthe guttata HOM05D002974 ORTHO05D002992 2.1e-10 69.7 118 48.3
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 2.1e-10 69.7 125 37.6
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 4.6e-10 68.6 128 40.6
CANSAT56G2792 Cannabis sativa HOM05D002974 ORTHO05D002992 6.0e-10 68.2 59 64.4
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 1.0e-09 67.4 139 35.3
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 1.3e-09 67.0 148 35.8
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 2.3e-09 66.2 140 38.6
Nitab4.5_0005808g0010 Nicotiana tabacum HOM05D002974 ORTHO05D002992 3.0e-09 65.9 155 38.7
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 3.9e-09 65.5 55 61.8
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 3.9e-09 65.5 61 55.7
Atru.chr12.1277 Acer truncatum HOM05D002974 ORTHO05D002992 5.1e-09 65.1 138 37.7
ECA234G2872 Erigeron canadensis HOM05D002974 ORTHO05D002992 6.6e-09 64.7 136 39.7
Rhsim07G0068200 Rhododendron simsii HOM05D002974 ORTHO05D002992 6.6e-09 64.7 125 41.6
Gorai.011G217100 Gossypium raimondii HOM05D002974 ORTHO05D002992 8.6e-09 64.3 139 36.0
EL10Ac2g02772 Beta vulgaris HOM05D012416 ORTHO05D002992 1.1e-08 63.9 147 37.4
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 1.1e-08 63.9 141 34.0
AUR62026884 Chenopodium quinoa HOM05D012416 ORTHO05D002992 1.5e-08 63.5 159 35.2
AUR62044059 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.5e-08 63.5 159 35.2
Sed0006618 Sechium edule HOM05D002974 ORTHO05D002992 1.5e-08 63.5 135 39.3
Gohir.A10G187100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.9e-08 63.2 139 35.3
Gohir.D10G194600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.9e-08 63.2 139 36.0
AUR62032633 Chenopodium quinoa HOM05D012416 ORTHO05D002992 2.5e-08 62.8 136 37.5
MELO3C012484.2 Cucumis melo HOM05D002974 ORTHO05D002992 5.6e-08 61.6 115 39.1
FvH4_7g03520 Fragaria vesca HOM05D002974 ORTHO05D002992 7.3e-08 61.2 52 59.6
FAN06G3677 Fragaria x ananassa HOM05D002974 ORTHO05D002992 7.3e-08 61.2 52 59.6
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 7.3e-08 61.2 149 34.2
Sed0000723 Sechium edule HOM05D002974 ORTHO05D002992 7.3e-08 61.2 56 62.5
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 7.3e-08 61.2 130 38.5
CSS0032574 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 9.5e-08 60.8 126 36.5
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 1.2e-07 60.5 56 57.1
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 1.2e-07 60.5 56 57.1
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 1.6e-07 60.1 142 38.0
CiPaw.10G040200 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.6e-07 60.1 138 34.1
CsaV3_5G036860 Cucumis sativus L. HOM05D002974 ORTHO05D002992 1.6e-07 60.1 99 43.4
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 2.1e-07 59.7 127 35.4
Cfa010941 Carpinus fangiana HOM05D002974 ORTHO05D002992 2.1e-07 59.7 113 41.6
Dinv06180 Davidia involucrata HOM05D002974 ORTHO05D002992 2.1e-07 59.7 117 34.2
TPR.G8953 Trifolium pratense HOM05D002974 ORTHO05D002992 2.1e-07 59.7 141 36.2
PSO339G5722 Papaver somniferum HOM05D002974 ORTHO05D002992 2.8e-07 59.3 145 33.1
Peaxi162Scf00082g00006 Petunia axillaris HOM05D002974 ORTHO05D002992 2.8e-07 59.3 47 66.0
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 2.8e-07 59.3 68 57.4
Lalb_Chr24g0400351 Lupinus albus HOM05D002974 ORTHO05D002992 3.6e-07 58.9 148 33.1
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 8.1e-07 57.8 60 53.3
ClCG05G026910 Citrullus lanatus HOM05D002974 ORTHO05D002992 8.1e-07 57.8 125 40.0
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 8.1e-07 57.8 107 42.1
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 8.1e-07 57.8 53 60.4
Lj3g0008937 Lotus japonicus HOM05D002974 ORTHO05D002992 8.1e-07 57.8 47 59.6
FAN01G3097 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.1e-06 57.4 52 59.6
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 1.1e-06 57.4 121 36.4
Potri.016G036600 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.4e-06 57.0 122 32.8
Ciclev10002803m.g Citrus clementina HOM05D002974 ORTHO05D002992 1.8e-06 56.6 137 34.3
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.8e-06 56.6 53 58.5
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 1.8e-06 56.6 148 30.4
QL04p017793 Quercus lobata HOM05D002974 ORTHO05D002992 1.8e-06 56.6 92 45.7
Thecc.05G134100 Theobroma cacao HOM05D002974 ORTHO05D002992 1.8e-06 56.6 129 32.6
Sc10g0004500 Simmondsia chinensis HOM05D002974 ORTHO05D002992 2.4e-06 56.2 146 32.9
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 3.1e-06 55.8 137 32.8
Psat3g078800 Pisum sativum HOM05D002974 ORTHO05D002992 3.1e-06 55.8 138 34.8
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 4.0e-06 55.5 51 56.9
CiPaw.09G047800 Carya illinoinensis HOM05D002974 ORTHO05D002992 5.2e-06 55.1 142 35.9
CDE08G1203 Ceratophyllum demersum HOM05D002974 ORTHO05D002992 5.2e-06 55.1 54 53.7
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 5.2e-06 55.1 51 60.8
MSTRG.26159 Avicennia marina HOM05D002974 ORTHO05D002992 6.8e-06 54.7 127 33.1
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 6.8e-06 54.7 132 30.3
Ah.10g030130 Amaranthus hybridus HOM05D002974 ORTHO05D002992 8.9e-06 54.3 80 43.8
Eucgr.G03218 Eucalyptus grandis HOM05D002974 ORTHO05D002992 8.9e-06 54.3 41 61.0
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 8.9e-06 54.3 55 54.5


User provided reference genes

Program Settings