Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01781 Erythranthe guttata HOM05D001638 ORTHO05D005197 2.8e-217 758.4 412 100.0
SGA_v2.0_scaffold5G02962 Striga asiatica HOM05D001638 ORTHO05D005197 1.1e-149 533.9 438 71.2
MSTRG.12501 Avicennia marina HOM05D001638 ORTHO05D005197 1.3e-145 520.4 440 68.9
SalBow6G5432 Salvia bowleyana HOM05D001638 ORTHO05D005197 4.4e-130 468.8 346 72.8
CSS0022011 Camellia sinensis var. sinensis HOM05D001638 ORTHO05D005197 1.5e-122 443.7 336 68.5
Gohir.A13G033800 Gossypium hirsutum HOM05D001638 ORTHO05D005197 1.7e-121 440.3 326 69.6
vmacro16776 Vaccinium macrocarpon HOM05D001638 ORTHO05D005197 1.7e-121 440.3 332 68.1
Actinidia40391 Actinidia chinensis HOM05D001638 ORTHO05D005197 4.9e-121 438.7 338 67.5
Rhsim07G0034600 Rhododendron simsii HOM05D001638 ORTHO05D005197 1.1e-120 437.6 332 68.1
Cc02_g24880 Coffea canephora HOM05D001638 ORTHO05D005197 1.4e-120 437.2 334 68.9
Dinv44076 Davidia involucrata HOM05D001638 ORTHO05D005197 1.4e-120 437.2 336 69.3
Dinv43635 Davidia involucrata HOM05D001638 ORTHO05D005197 5.4e-120 435.3 330 70.3
Eucgr.F04452 Eucalyptus grandis HOM05D001638 ORTHO05D005197 7.0e-120 434.9 330 69.1
Gorai.013G036600 Gossypium raimondii HOM05D001638 ORTHO05D005197 2.3e-118 429.9 321 69.2
CiPaw.14G021800 Carya illinoinensis HOM05D001638 ORTHO05D005197 6.6e-118 428.3 386 63.2
Thecc.02G084000 Theobroma cacao HOM05D001638 ORTHO05D005197 2.5e-117 426.4 328 69.2
Duzib132G0757 Durio zibethinus HOM05D001638 ORTHO05D005197 3.3e-117 426.0 334 69.5
Ciclev10015475m.g Citrus clementina HOM05D001638 ORTHO05D005197 1.2e-116 424.1 330 69.1
Gohir.D13G032100 Gossypium hirsutum HOM05D001638 ORTHO05D005197 1.6e-116 423.7 318 68.6
Potri.019G085100 Populus trichocarpa HOM05D001638 ORTHO05D005197 4.7e-116 422.2 323 68.7
unitig_37.g13004 Utricularia gibba HOM05D000186 ORTHO05D001124 4.7e-116 422.2 341 67.4
TAR629G0136 Trochodendron aralioides HOM05D001638 ORTHO05D005197 8.0e-116 421.4 346 64.7
DCAR_023354 Daucus carota HOM05D001638 ORTHO05D005197 3.0e-115 419.5 350 64.6
GSVIVG01018246001 Vitis vinifera HOM05D001638 ORTHO05D005197 5.2e-115 418.7 335 67.8
Manes.01G272000 Manihot esculenta HOM05D001638 ORTHO05D005197 6.8e-115 418.3 350 66.0
HanXRQChr14g0428901 Helianthus annuus HOM05D001638 ORTHO05D005197 8.9e-115 417.9 334 66.8
HanXRQChr01g0007441 Helianthus annuus HOM05D001638 ORTHO05D005197 1.5e-114 417.2 332 66.0
Sc02g0002980 Simmondsia chinensis HOM05D001638 ORTHO05D005197 4.4e-114 415.6 336 63.7
arahy.Tifrunner.gnm1.ann1.9JI82G Arachis hypogaea HOM05D001638 ORTHO05D005197 2.9e-113 412.9 333 67.6
Medtr5g064850 Medicago truncatula HOM05D001638 ORTHO05D005197 3.7e-113 412.5 337 65.6
arahy.Tifrunner.gnm1.ann1.MQ0E05 Arachis hypogaea HOM05D001638 ORTHO05D005197 6.4e-113 411.8 340 65.6
Prupe.2G127200 Prunus persica HOM05D001638 ORTHO05D005197 8.3e-113 411.4 339 67.3
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 1.4e-112 410.6 346 63.9
VMungo1383G3402 Vigna mungo HOM05D001638 ORTHO05D005197 7.0e-112 408.3 400 58.8
AUR62023428 Chenopodium quinoa HOM05D001638 ORTHO05D005197 9.2e-112 407.9 405 60.7
COL.COLO4_25944 Corchorus olitorius HOM05D001638 ORTHO05D005197 1.2e-111 407.5 322 67.1
CANSAT56G0649 Cannabis sativa HOM05D001638 ORTHO05D005197 1.6e-111 407.1 326 65.6
MD02G1217000 Malus domestica HOM05D001638 ORTHO05D005197 1.6e-111 407.1 334 67.1
Medtr7g007890 Medicago truncatula HOM05D001638 ORTHO05D005197 4.6e-111 405.6 337 65.0
Sp2g24540 Schrenkiella parvula HOM05D001638 ORTHO05D005197 5.9e-111 405.2 326 65.3
Cfa011091 Carpinus fangiana HOM05D001638 ORTHO05D005197 1.7e-110 403.7 313 69.3
Nn6g33853 Nelumbo nucifera HOM05D001638 ORTHO05D005197 1.7e-110 403.7 330 66.1
Lsat_1_v5_gn_4_15080 Lactuca sativa HOM05D001638 ORTHO05D005197 2.3e-110 403.3 338 64.2
Glyma.09G089400 Glycine max HOM05D001638 ORTHO05D005197 3.0e-110 402.9 327 66.4
Psat0s3614g0040 Pisum sativum HOM05D001638 ORTHO05D005197 3.9e-110 402.5 343 64.7
LjContig00564g0006049 Lotus japonicus HOM05D001638 ORTHO05D005197 6.6e-110 401.7 392 61.2
Thhalv10004255m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 1.5e-109 400.6 334 63.8
Ca_04112_v3 Cicer arietinum L. HOM05D001638 ORTHO05D005197 5.6e-109 398.7 340 63.2
Phvul.008G045000 Phaseolus vulgaris HOM05D001638 ORTHO05D005197 7.3e-109 398.3 415 59.0
PGR031G2794 Punica granatum HOM05D001638 ORTHO05D005197 9.5e-109 397.9 330 64.8
C07p44980 Brassica napus HOM05D001638 ORTHO05D005197 1.2e-108 397.5 329 66.0
BcaC04g23457 Brassica carinata HOM05D001638 ORTHO05D005197 1.6e-108 397.1 329 64.4
Glyma.18G253900 Glycine max HOM05D001638 ORTHO05D005197 2.8e-108 396.4 333 65.5
AT5G61330 Arabidopsis thaliana HOM05D001638 ORTHO05D005197 4.7e-108 395.6 329 63.5
A03p46940 Brassica napus HOM05D001638 ORTHO05D005197 4.7e-108 395.6 327 66.1
BraA03t13813Z Brassica rapa HOM05D001638 ORTHO05D005197 4.7e-108 395.6 331 65.6
C09p08140 Brassica napus HOM05D001638 ORTHO05D005197 6.2e-108 395.2 329 64.1
BolC9t53726H Brassica oleracea HOM05D001638 ORTHO05D005197 6.2e-108 395.2 329 64.1
Ah.03g133920 Amaranthus hybridus HOM05D001638 ORTHO05D005197 1.0e-107 394.4 413 57.6
AL8G37990 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 1.0e-107 394.4 328 64.0
TAR636G3630 Trochodendron aralioides HOM05D001638 ORTHO05D005197 1.0e-107 394.4 327 65.7
TWI23G0567 Tripterygium wilfordii HOM05D001638 ORTHO05D005197 1.4e-107 394.0 329 63.8
EL10Ac1g00784 Beta vulgaris HOM05D001638 ORTHO05D005197 3.1e-107 392.9 336 62.5
BolC7t45021H Brassica oleracea HOM05D001638 ORTHO05D005197 3.1e-107 392.9 325 65.5
CARHR275090 Cardamine hirsuta HOM05D001638 ORTHO05D005197 4.0e-107 392.5 332 64.2
Lalb_Chr19g0127051 Lupinus albus HOM05D001638 ORTHO05D005197 4.0e-107 392.5 316 66.5
Hund17077 Selenicereus undatus HOM05D001638 ORTHO05D005197 4.0e-107 392.5 357 61.1
PGSC0003DMG400026041 Solanum tuberosum HOM05D001638 ORTHO05D005197 4.0e-107 392.5 324 66.4
RcHm_v2.0_Chr1g0346971 Rosa chinensis HOM05D001638 ORTHO05D005197 8.9e-107 391.3 336 64.0
A09p07280 Brassica napus HOM05D001638 ORTHO05D005197 1.5e-106 390.6 333 63.7
FvH4_7g09810 Fragaria vesca HOM05D001638 ORTHO05D005197 2.0e-106 390.2 337 64.1
MBI04_g36329_MAGBIO Magnolia biondii HOM05D001638 ORTHO05D005197 2.0e-106 390.2 405 54.8
Solyc01g090470.3 Solanum lycopersicum HOM05D001638 ORTHO05D005197 2.0e-106 390.2 321 66.4
Sopen01g036260 Solanum pennellii HOM05D001638 ORTHO05D005197 2.0e-106 390.2 321 66.7
FAN10G1788 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.7e-105 387.1 343 62.4
FAN10G2339 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.7e-105 387.1 343 62.4
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 2.2e-105 386.7 382 57.6
Carub.0008s2200 Capsella rubella HOM05D001638 ORTHO05D005197 1.1e-104 384.4 336 60.4
QL04p031108 Quercus lobata HOM05D001638 ORTHO05D005197 1.4e-104 384.0 330 63.9
Peaxi162Scf00392g00227 Petunia axillaris HOM05D001638 ORTHO05D005197 2.4e-104 383.3 290 69.7
MELO3C005976.2 Cucumis melo HOM05D001638 ORTHO05D005197 4.1e-104 382.5 330 62.7
CsaV3_3G007540 Cucumis sativus L. HOM05D001638 ORTHO05D005197 9.2e-104 381.3 327 63.0
THA.LOC104818326 Tarenaya hassleriana HOM05D001638 ORTHO05D005197 1.6e-103 380.6 339 62.2
BcaB04g19906 Brassica carinata HOM05D001638 ORTHO05D005197 4.6e-103 379.0 336 62.2
BcaC06g33229 Brassica carinata HOM05D001638 ORTHO05D005197 6.0e-103 378.6 336 63.4
FAN01G1872 Fragaria x ananassa HOM05D001638 ORTHO05D005197 6.0e-103 378.6 331 62.8
DCAR_029773 Daucus carota HOM05D001638 ORTHO05D005197 1.0e-102 377.9 370 58.4
BraA09t36377Z Brassica rapa HOM05D001638 ORTHO05D005197 1.3e-102 377.5 323 62.5
CAN.G362.16 Capsicum annuum HOM05D001638 ORTHO05D005197 1.7e-102 377.1 288 69.8
ClCG05G000380 Citrullus lanatus HOM05D001638 ORTHO05D005197 7.3e-101 371.7 332 61.7
PSO541G3735 Papaver somniferum HOM05D001638 ORTHO05D005197 9.5e-101 371.3 315 62.2
Sed0004454 Sechium edule HOM05D001638 ORTHO05D005197 9.5e-101 371.3 342 60.2
TPR.G11809 Trifolium pratense HOM05D001638 ORTHO05D005197 1.6e-100 370.5 361 58.2
Lsat_1_v5_gn_4_70960 Lactuca sativa HOM05D001638 ORTHO05D005197 1.4e-99 367.5 340 59.4
Aa31LG11G2080 Aethionema arabicum HOM05D001638 ORTHO05D005197 3.1e-99 366.3 312 63.8
PSO170G6800 Papaver somniferum HOM05D001638 ORTHO05D005197 6.8e-99 365.2 303 62.7
ECA234G3220 Erigeron canadensis HOM05D001638 ORTHO05D005197 7.5e-98 361.7 304 66.4
Os01g0526200 Oryza sativa ssp. japonica HOM05D001638 ORTHO05D005197 2.4e-96 356.7 330 57.0
PSO017G3357 Papaver somniferum HOM05D001638 ORTHO05D005197 1.6e-95 354.0 295 62.7
Aqoxy7G00848 Aquilegia oxysepala HOM05D001638 ORTHO05D005197 2.7e-95 353.2 342 58.8
CDE03G0227 Ceratophyllum demersum HOM05D001638 ORTHO05D005197 6.0e-95 352.1 339 58.4
SGA_v2.0_scaffold131G34466 Striga asiatica HOM05D001638 ORTHO05D005197 1.1e-93 347.8 223 81.6
FAN06G3795 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.6e-92 344.0 442 48.4
Zm00001eb333990 Zea mays HOM05D001638 ORTHO05D005197 6.0e-87 325.5 300 57.7
HPP92_024242 Vanilla planifolia HOM05D001638 ORTHO05D005197 1.7e-86 323.9 326 55.2
ATR0057G068 Amborella trichopoda HOM05D001638 ORTHO05D005197 3.3e-85 319.7 310 55.5
Zm00001eb127190 Zea mays HOM05D001638 ORTHO05D005197 5.6e-85 318.9 300 55.0
QL01p011221 Quercus lobata HOM05D001638 ORTHO05D005197 2.4e-83 313.5 346 54.3
Thhalv10020921m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 5.2e-83 312.4 313 56.2
AL1G10102 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 2.2e-81 307.0 309 56.6
SEGI_12976 Sequoiadendron giganteum HOM05D001638 ORTHO05D005197 7.1e-80 302.0 346 48.8
Nitab4.5_0000914g0150 Nicotiana tabacum HOM05D001638 ORTHO05D005197 4.3e-77 292.7 305 58.0
Nitab4.5_0010229g0010 Nicotiana tabacum HOM05D001638 ORTHO05D005197 2.9e-73 280.0 227 67.8
MD07G1102000 Malus domestica HOM05D001638 ORTHO05D005197 1.8e-59 234.2 214 61.2
Mapoly0029s0122 Marchantia polymorpha HOM05D001638 ORTHO05D005197 1.8e-59 234.2 404 37.6
Pp3c5_7370 Physcomitrium patens HOM05D001638 ORTHO05D005197 4.5e-58 229.6 330 41.2
SHI03505 Sapria himalayana HOM05D001638 ORTHO05D005197 1.0e-49 201.8 310 44.2
AUR62013726 Chenopodium quinoa HOM05D001638 ORTHO05D005197 1.5e-45 188.0 141 70.2
Atru.chr5.164 Acer truncatum HOM05D001638 ORTHO05D005197 2.8e-44 183.7 158 63.3
FAN06G4892 Fragaria x ananassa HOM05D001638 ORTHO05D005197 3.1e-43 180.3 153 64.1
FAN03G2111 Fragaria x ananassa HOM05D001638 ORTHO05D001690 8.5e-41 172.2 155 61.3
AL4G38750 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 6.7e-38 162.5 161 57.1
Atru.chr5.165 Acer truncatum HOM05D001638 ORTHO05D005197 5.7e-37 159.5 113 72.6
arahy.Tifrunner.gnm1.ann1.XG8PKW Arachis hypogaea HOM05D001638 ORTHO05D005197 1.3e-36 158.3 176 54.0
Cre13.g587000 Chlamydomonas reinhardtii HOM05D001638 ORTHO05D005197 1.3e-36 158.3 385 32.5
Actinidia12156 Actinidia chinensis HOM05D001638 ORTHO05D005197 2.8e-36 157.1 113 70.8
SMO141G0070 Selaginella moellendorffii HOM05D001638 ORTHO05D005197 2.8e-36 157.1 336 35.4
MCO04G285 Micromonas commoda HOM05D001638 ORTHO05D005197 1.1e-35 155.2 361 31.6
Haze_17173 Corylus avellana HOM05D001638 ORTHO05D005197 1.4e-32 144.8 215 45.1
Cpa.g.sc116.74 Carica papaya HOM05D001638 ORTHO05D005197 5.5e-24 116.3 98 58.2
Actinidia12157 Actinidia chinensis HOM05D001638 ORTHO05D005197 8.0e-23 112.5 71 74.6
MD07G1101900 Malus domestica HOM05D001638 ORTHO05D005197 8.0e-23 112.5 171 42.7
MD02G1263900 Malus domestica HOM05D001638 ORTHO05D005197 1.8e-22 111.3 100 63.0
Oeu051899.1 Olea europaea HOM05D001638 ORTHO05D005197 6.3e-20 102.8 59 84.7
Actinidia12155 Actinidia chinensis HOM05D001638 ORTHO05D005197 5.3e-19 99.8 77 63.6
Oeu021607.1 Olea europaea HOM05D001638 ORTHO05D005197 5.9e-18 96.3 59 78.0
AagrBONN_evm.TU.Sc2ySwM_368.1521 Anthoceros agrestis HOM05D001638 ORTHO05D005197 1.0e-17 95.5 98 51.0
arahy.Tifrunner.gnm1.ann1.HIFV4E Arachis hypogaea HOM05D001638 ORTHO05D005197 3.8e-17 93.6 193 34.7
arahy.Tifrunner.gnm1.ann1.XV6DNZ Arachis hypogaea HOM05D001638 ORTHO05D005197 6.5e-17 92.8 61 72.1
FAN06G4261 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.9e-16 91.3 137 47.4
Cpa.g.c42599 Carica papaya HOM05D001638 ORTHO05D005197 4.2e-16 90.1 70 65.7
arahy.Tifrunner.gnm1.ann1.11FR17 Arachis hypogaea HOM05D001638 ORTHO05D005197 5.5e-16 89.7 60 75.0
MD02G1264000 Malus domestica HOM05D001638 ORTHO05D005197 9.4e-16 89.0 66 69.7
CBR_g1066 Chara braunii HOM05D001638 ORTHO05D005197 1.2e-15 88.6 174 33.3
FvH4_7g09370 Fragaria vesca HOM05D001638 ORTHO05D005197 1.0e-14 85.5 140 43.6
MD02G1264200 Malus domestica HOM05D001638 ORTHO05D005197 1.0e-14 85.5 68 67.6
PRCOL_00005874 Prasinoderma coloniale HOM05D001638 ORTHO05D005197 6.8e-14 82.8 345 24.6
MD07G1102300 Malus domestica HOM05D001638 ORTHO05D005197 7.5e-13 79.3 116 43.1
Cfa024988 Carpinus fangiana HOM05D001638 ORTHO05D124161 4.8e-12 76.6 328 26.5
FAN06G2650 Fragaria x ananassa HOM05D001638 ORTHO05D005197 7.7e-10 69.3 91 50.5
CBR_g1068 Chara braunii HOM05D001638 ORTHO05D005197 2.5e-08 64.3 171 27.5
Sed0021805 Sechium edule HOM05D001638 ORTHO05D005197 9.5e-08 62.4 132 38.6
arahy.Tifrunner.gnm1.ann1.R2G04T Arachis hypogaea HOM05D001638 ORTHO05D005197 8.8e-06 55.8 33 81.8


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