Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01772 Erythranthe guttata HOM05D004434 ORTHO05D000365 1.7e-51 206.1 134 100.0
MSTRG.4915 Avicennia marina HOM05D004434 ORTHO05D000365 1.5e-23 113.2 149 56.4
SalBow5G5182 Salvia bowleyana HOM05D004434 ORTHO05D000365 6.4e-22 107.8 151 51.0
MSTRG.28173 Avicennia marina HOM05D000627 ORTHO05D000365 4.1e-21 105.1 134 59.7
THA.LOC104801484 Tarenaya hassleriana HOM05D004434 ORTHO05D000365 2.7e-20 102.4 132 57.6
Gohir.D11G082600 Gossypium hirsutum HOM05D004434 ORTHO05D000365 7.8e-20 100.9 150 56.7
Gorai.008G106900 Gossypium raimondii HOM05D004434 ORTHO05D000365 5.1e-19 98.2 134 47.8
CARHR248100 Cardamine hirsuta HOM05D004434 ORTHO05D000365 8.6e-19 97.4 139 51.1
AT4G00050 Arabidopsis thaliana HOM05D004434 ORTHO05D000365 1.5e-18 96.7 140 53.6
Duzib133G0507 Durio zibethinus HOM05D004434 ORTHO05D000365 1.5e-18 96.7 147 57.8
Phvul.008G144300 Phaseolus vulgaris HOM05D004434 ORTHO05D000365 1.9e-18 96.3 151 57.0
Gohir.A11G078200 Gossypium hirsutum HOM05D004434 ORTHO05D000365 5.6e-18 94.7 152 56.6
COL.COLO4_12473 Corchorus olitorius HOM05D004434 ORTHO05D000365 7.3e-18 94.4 144 54.9
A03p32250 Brassica napus HOM05D004434 ORTHO05D000365 1.2e-17 93.6 144 54.2
BraA03t12395Z Brassica rapa HOM05D004434 ORTHO05D000365 1.2e-17 93.6 144 54.2
AL6G53460 Arabidopsis lyrata HOM05D004434 ORTHO05D000365 2.1e-17 92.8 143 51.7
Duzib138G1022 Durio zibethinus HOM05D004434 ORTHO05D000365 2.8e-17 92.4 148 54.1
A03p27120 Brassica napus HOM05D004434 ORTHO05D000365 6.2e-17 91.3 144 53.5
Thhalv10028687m.g Eutrema salsugineum HOM05D004434 ORTHO05D000365 8.1e-17 90.9 146 50.0
MD07G1113200 Malus domestica HOM05D004434 ORTHO05D000365 8.1e-17 90.9 144 56.2
Actinidia12178 Actinidia chinensis HOM05D004434 ORTHO05D000365 1.1e-16 90.5 156 48.1
Glyma.01G076900 Glycine max HOM05D004434 ORTHO05D000365 1.1e-16 90.5 153 55.6
Thecc.01G385200 Theobroma cacao HOM05D004434 ORTHO05D000365 1.1e-16 90.5 145 55.9
C03p39300 Brassica napus HOM05D004434 ORTHO05D000365 1.4e-16 90.1 144 52.8
Cc02_g24640 Coffea canephora HOM05D004434 ORTHO05D000365 1.4e-16 90.1 143 57.3
BcaB01g02182 Brassica carinata HOM05D004434 ORTHO05D000365 1.8e-16 89.7 144 52.8
BcaC01g06888 Brassica carinata HOM05D004434 ORTHO05D000365 2.3e-16 89.4 144 52.8
BolC3t16201H Brassica oleracea HOM05D004434 ORTHO05D000365 2.3e-16 89.4 144 52.8
Nitab4.5_0000706g0090 Nicotiana tabacum HOM05D004434 ORTHO05D000365 2.3e-16 89.4 155 56.1
SalBow5G5153 Salvia bowleyana HOM05D004434 ORTHO05D000365 4.0e-16 88.6 142 55.6
BolC9t52944H Brassica oleracea HOM05D004434 ORTHO05D000365 5.2e-16 88.2 141 52.5
Sopen01g036520 Solanum pennellii HOM05D004434 ORTHO05D000365 6.8e-16 87.8 146 54.1
Gorai.007G088300 Gossypium raimondii HOM05D004434 ORTHO05D000365 8.9e-16 87.4 174 47.7
BcaC04g24205 Brassica carinata HOM05D004434 ORTHO05D000365 2.6e-15 85.9 141 51.8
Manes.01G269700 Manihot esculenta HOM05D004434 ORTHO05D000365 2.6e-15 85.9 145 57.2
Potri.002G143300 Populus trichocarpa HOM05D004434 ORTHO05D000365 2.6e-15 85.9 153 50.3
Solyc01g090790.4 Solanum lycopersicum HOM05D004434 ORTHO05D000365 4.4e-15 85.1 146 53.4
Lj1g0013991 Lotus japonicus HOM05D004434 ORTHO05D000365 7.6e-15 84.3 152 51.3
Nn1g00983 Nelumbo nucifera HOM05D004434 ORTHO05D000365 7.6e-15 84.3 142 52.8
Rhsim07G0032300 Rhododendron simsii HOM05D004434 ORTHO05D000365 9.9e-15 84.0 149 54.4
Sabra02G0111700 Salix brachista HOM05D004434 ORTHO05D000365 9.9e-15 84.0 147 51.0
BcaC01g04892 Brassica carinata HOM05D004434 ORTHO05D000365 1.3e-14 83.6 144 51.4
A09p00770 Brassica napus HOM05D004434 ORTHO05D000365 1.3e-14 83.6 142 50.7
C03p32580 Brassica napus HOM05D004434 ORTHO05D000365 1.3e-14 83.6 144 51.4
C09p00090 Brassica napus HOM05D004434 ORTHO05D000365 1.3e-14 83.6 142 50.7
BolC3t15597H Brassica oleracea HOM05D004434 ORTHO05D000365 1.3e-14 83.6 144 51.4
BraA09t35683Z Brassica rapa HOM05D004434 ORTHO05D000365 1.3e-14 83.6 142 50.7
Oeu000035.2 Olea europaea HOM05D004434 ORTHO05D000365 1.3e-14 83.6 151 48.3
BraA03t11925Z Brassica rapa HOM05D004434 ORTHO05D000365 1.7e-14 83.2 142 52.1
Cfa011141 Carpinus fangiana HOM05D004434 ORTHO05D000365 2.9e-14 82.4 133 56.4
CiPaw.13G031500 Carya illinoinensis HOM05D004434 ORTHO05D000365 2.9e-14 82.4 145 55.2
RcHm_v2.0_Chr1g0348781 Rosa chinensis HOM05D004434 ORTHO05D000365 2.9e-14 82.4 141 54.6
ECA236G3114 Erigeron canadensis HOM05D004434 ORTHO05D000365 3.7e-14 82.0 138 52.9
PGSC0003DMG400025976 Solanum tuberosum HOM05D004434 ORTHO05D000365 3.7e-14 82.0 150 52.0
GSVIVG01018165001 Vitis vinifera HOM05D004434 ORTHO05D000365 3.7e-14 82.0 137 52.6
TWI14G0925 Tripterygium wilfordii HOM05D004434 ORTHO05D000365 6.4e-14 81.3 154 52.6
Sed0003684 Sechium edule HOM05D004434 ORTHO05D000365 8.4e-14 80.9 148 40.5
QL04p035929 Quercus lobata HOM05D004434 ORTHO05D000365 1.1e-13 80.5 143 52.4
Sp6g00110 Schrenkiella parvula HOM05D004434 ORTHO05D000365 1.9e-13 79.7 148 48.6
Carub.0006s3717 Capsella rubella HOM05D004434 ORTHO05D000365 2.4e-13 79.3 146 46.6
TPR.G39043 Trifolium pratense HOM05D004434 ORTHO05D000365 2.4e-13 79.3 146 52.1
ClCG06G002970 Citrullus lanatus HOM05D004434 ORTHO05D000365 3.2e-13 79.0 155 50.3
Haze_02718 Corylus avellana HOM05D004434 ORTHO05D000365 3.2e-13 79.0 132 53.8
FvH4_7g10840 Fragaria vesca HOM05D004434 ORTHO05D000365 3.2e-13 79.0 141 51.1
FAN06G0262 Fragaria x ananassa HOM05D004434 ORTHO05D000365 3.2e-13 79.0 141 51.1
FAN06G1690 Fragaria x ananassa HOM05D004434 ORTHO05D000365 3.2e-13 79.0 141 51.1
Nn6g33946 Nelumbo nucifera HOM05D004434 ORTHO05D000365 3.2e-13 79.0 139 49.6
Aqoxy5G03868 Aquilegia oxysepala HOM05D004434 ORTHO05D000365 5.4e-13 78.2 147 52.4
Peaxi162Scf00377g00029 Petunia axillaris HOM05D004434 ORTHO05D000365 5.4e-13 78.2 137 52.6
HanXRQChr13g0422911 Helianthus annuus HOM05D004434 ORTHO05D000365 7.1e-13 77.8 148 43.2
Ciclev10020053m.g Citrus clementina HOM05D004434 ORTHO05D000365 9.2e-13 77.4 133 54.9
CSS0014185 Camellia sinensis var. sinensis HOM05D004434 ORTHO05D000365 1.2e-12 77.0 129 54.3
FAN03G0453 Fragaria x ananassa HOM05D004434 ORTHO05D000365 1.2e-12 77.0 139 51.1
FAN10G1781 Fragaria x ananassa HOM05D004434 ORTHO05D000365 1.6e-12 76.6 139 51.1
Lalb_Chr01g0021481 Lupinus albus HOM05D004434 ORTHO05D000365 1.6e-12 76.6 151 50.3
DCAR_025094 Daucus carota HOM05D004434 ORTHO05D000365 3.5e-12 75.5 148 48.0
Eucgr.D02499 Eucalyptus grandis HOM05D004434 ORTHO05D000365 4.6e-12 75.1 163 44.2
FAN10G0381 Fragaria x ananassa HOM05D004434 ORTHO05D000365 4.6e-12 75.1 139 50.4
vmacro13455 Vaccinium macrocarpon HOM05D004434 ORTHO05D000365 7.8e-12 74.3 161 49.1
MBI04_g09506_MAGBIO Magnolia biondii HOM05D004434 ORTHO05D000365 1.0e-11 73.9 143 51.0
Oeu061521.1 Olea europaea HOM05D004434 ORTHO05D000365 1.0e-11 73.9 88 56.8
Potri.014G066500 Populus trichocarpa HOM05D004434 ORTHO05D000365 1.0e-11 73.9 140 49.3
Sabra14G0046500 Salix brachista HOM05D004434 ORTHO05D000365 1.0e-11 73.9 158 49.4
PGR004G2137 Punica granatum HOM05D004434 ORTHO05D000365 3.0e-11 72.4 161 47.8
ATR0317G093 Amborella trichopoda HOM05D004434 ORTHO05D000365 3.9e-11 72.0 135 51.1
CANSAT21G1995 Cannabis sativa HOM05D004434 ORTHO05D000365 3.9e-11 72.0 147 52.4
Hma1.2p1_0301F.1_g118230 Hydrangea macrophylla HOM05D004434 ORTHO05D000365 3.9e-11 72.0 157 49.7
Migut.B01581 Erythranthe guttata HOM05D004434 ORTHO05D000365 5.1e-11 71.6 138 53.6
TAR629G0313 Trochodendron aralioides HOM05D004434 ORTHO05D000365 6.6e-11 71.2 142 50.7
EL10Ac1g00826 Beta vulgaris HOM05D004434 ORTHO05D000365 1.1e-10 70.5 150 48.7
arahy.Tifrunner.gnm1.ann1.F2RES5 Arachis hypogaea HOM05D004434 ORTHO05D000365 4.3e-10 68.6 152 48.0
HanXRQChr03g0093291 Helianthus annuus HOM05D004434 ORTHO05D000365 4.3e-10 68.6 141 46.1
CDE11G0949 Ceratophyllum demersum HOM05D004434 ORTHO05D000365 5.6e-10 68.2 143 47.6
ECA240G3600 Erigeron canadensis HOM05D004434 ORTHO05D000365 5.6e-10 68.2 152 46.1
Nitab4.5_0001026g0100 Nicotiana tabacum HOM05D004434 ORTHO05D000365 1.2e-09 67.0 151 46.4
Aa31LG5G120 Aethionema arabicum HOM05D004434 ORTHO05D000365 2.1e-09 66.2 136 49.3
arahy.Tifrunner.gnm1.ann1.XPK4NL Arachis hypogaea HOM05D004434 ORTHO05D000365 2.1e-09 66.2 152 47.4
MSTRG.20724 Avicennia marina HOM05D004434 ORTHO05D000365 2.1e-09 66.2 139 54.0
Cpa.g.sc212.3 Carica papaya HOM05D000627 ORTHO05D000365 2.1e-09 66.2 141 50.4
Actinidia33486 Actinidia chinensis HOM05D004434 ORTHO05D000365 3.6e-09 65.5 138 51.4
Dinv44112 Davidia involucrata HOM05D004434 ORTHO05D000365 3.6e-09 65.5 115 58.3
Manes.05G049900 Manihot esculenta HOM05D004434 ORTHO05D000365 6.2e-09 64.7 111 53.2
ATR0064G084 Amborella trichopoda HOM05D000627 ORTHO05D000365 8.1e-09 64.3 138 38.4
CiPaw.14G024800 Carya illinoinensis HOM05D004434 ORTHO05D000365 1.1e-08 63.9 141 47.5
Lsat_1_v5_gn_7_10141 Lactuca sativa HOM05D004434 ORTHO05D000365 1.8e-08 63.2 136 47.1
CSS0021988 Camellia sinensis var. sinensis HOM05D004434 ORTHO05D000365 6.8e-08 61.2 138 47.8
Ah.05g173680 Amaranthus hybridus HOM05D004434 ORTHO05D000365 1.5e-07 60.1 156 42.3
CDE02G4020 Ceratophyllum demersum HOM05D000627 ORTHO05D000365 1.5e-07 60.1 130 36.2
CDE11G0905 Ceratophyllum demersum HOM05D000627 ORTHO05D000365 1.5e-07 60.1 133 36.1
Atru.chr5.222 Acer truncatum HOM05D004434 ORTHO05D000365 2.0e-07 59.7 115 56.5
DCAR_015869 Daucus carota HOM05D004434 ORTHO05D000365 3.4e-07 58.9 133 39.1
Nitab4.5_0000475g0100 Nicotiana tabacum HOM05D004434 ORTHO05D000365 4.4e-07 58.5 146 37.0
QL04p037353 Quercus lobata HOM05D004434 ORTHO05D000365 4.4e-07 58.5 127 49.6
Lj9C564T0 Lonicera japonica HOM05D004434 ORTHO05D000365 9.9e-07 57.4 114 51.8
Peaxi162Scf00441g00317 Petunia axillaris HOM05D004434 ORTHO05D000365 9.9e-07 57.4 131 34.4
Actinidia22769 Actinidia chinensis HOM05D004434 ORTHO05D000365 1.3e-06 57.0 64 54.7
CsaV3_6G009090 Cucumis sativus L. HOM05D004434 ORTHO05D000365 1.3e-06 57.0 152 45.4
Hund27382 Selenicereus undatus HOM05D004434 ORTHO05D000365 1.3e-06 57.0 153 41.2
Solyc10g018510.2 Solanum lycopersicum HOM05D004434 ORTHO05D000365 1.7e-06 56.6 147 35.4
Eucgr.K02496 Eucalyptus grandis HOM05D000627 ORTHO05D000365 2.2e-06 56.2 131 36.6
Lsat_1_v5_gn_3_129041 Lactuca sativa HOM05D004434 ORTHO05D000365 2.9e-06 55.8 125 45.6
CDE09G0972 Ceratophyllum demersum HOM05D004434 ORTHO05D000365 3.8e-06 55.5 133 33.8


User provided reference genes

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