Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 1.1e-130 469.9 240 100.0
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 1.2e-103 380.2 240 78.8
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 2.1e-92 342.8 229 75.5
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 4.7e-92 341.7 240 71.7
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 7.5e-90 334.3 266 65.4
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 2.5e-85 319.3 237 68.8
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 2.5e-85 319.3 240 68.8
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 7.3e-85 317.8 229 68.6
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 7.3e-85 317.8 240 66.2
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.6e-84 316.6 237 68.8
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 2.8e-84 315.8 240 64.6
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 3.6e-84 315.5 239 64.9
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 5.2e-83 311.6 240 63.8
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 8.9e-83 310.8 237 63.3
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 8.9e-83 310.8 237 63.3
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.5e-82 310.1 237 62.4
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 2.6e-82 309.3 240 64.6
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 4.4e-82 308.5 240 62.9
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 4.4e-82 308.5 239 62.3
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 5.8e-82 308.1 262 61.1
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 7.5e-82 307.8 240 62.9
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.3e-81 307.0 240 64.6
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 1.3e-81 307.0 237 64.1
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 3.7e-81 305.4 237 62.9
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 3.7e-81 305.4 240 61.7
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 6.4e-81 304.7 235 64.3
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 1.9e-80 303.1 239 61.9
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 1.9e-80 303.1 230 63.9
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 2.4e-80 302.8 243 61.3
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 2.4e-80 302.8 240 62.9
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 5.4e-80 301.6 240 62.1
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 2.7e-79 299.3 240 60.8
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 2.7e-79 299.3 240 61.2
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 3.5e-79 298.9 229 66.8
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 6.0e-79 298.1 239 61.1
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 6.0e-79 298.1 235 60.4
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 7.8e-79 297.7 222 65.3
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.3e-78 297.0 240 61.2
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.3e-78 297.0 235 62.6
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 1.3e-78 297.0 227 66.5
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 2.3e-78 296.2 240 60.8
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 3.0e-78 295.8 240 60.8
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 3.9e-78 295.4 257 56.8
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 5.0e-78 295.0 237 60.3
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 8.6e-78 294.3 235 62.1
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 1.1e-77 293.9 240 62.1
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 1.5e-77 293.5 227 61.7
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 1.9e-77 293.1 236 63.1
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 2.5e-77 292.7 217 67.3
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 3.3e-77 292.4 240 60.4
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 4.3e-77 292.0 238 62.6
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 5.6e-77 291.6 238 61.8
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 7.3e-77 291.2 240 60.4
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 2.8e-76 289.3 227 62.1
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 3.6e-76 288.9 239 59.0
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 3.6e-76 288.9 239 59.4
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 8.1e-76 287.7 231 61.5
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 8.1e-76 287.7 240 57.9
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 1.1e-75 287.3 237 59.9
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 1.4e-75 287.0 216 62.5
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 1.8e-75 286.6 240 58.3
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 2.3e-75 286.2 228 61.4
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 3.1e-75 285.8 227 62.1
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 5.2e-75 285.0 233 61.8
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 6.8e-75 284.6 238 61.3
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 2.0e-74 283.1 229 62.0
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 2.0e-74 283.1 231 61.9
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 2.0e-74 283.1 240 57.5
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 4.4e-74 282.0 214 64.5
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 5.8e-74 281.6 232 58.6
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 1.7e-73 280.0 237 57.8
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 2.2e-73 279.6 239 56.1
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 8.3e-73 277.7 240 55.4
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 1.1e-72 277.3 240 56.7
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 1.4e-72 276.9 239 56.9
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 2.4e-72 276.2 227 61.2
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 5.4e-72 275.0 233 58.8
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 7.1e-72 274.6 243 56.8
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 9.2e-72 274.2 232 56.9
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 1.2e-71 273.9 223 61.9
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 1.6e-71 273.5 240 55.0
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 2.1e-71 273.1 240 55.0
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 2.1e-71 273.1 240 55.0
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 6.0e-71 271.6 238 57.1
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 3.9e-70 268.9 232 59.1
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 5.1e-70 268.5 231 55.4
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 5.1e-70 268.5 243 55.6
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 8.6e-70 267.7 224 58.9
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 1.1e-69 267.3 211 62.6
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 5.6e-69 265.0 223 57.4
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 1.8e-67 260.0 240 53.8
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 5.2e-67 258.5 224 59.8
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 1.3e-65 253.8 227 56.4
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 6.9e-59 231.5 227 52.4
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 5.1e-54 215.3 201 57.2
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 1.1e-51 207.6 231 48.5
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 2.0e-50 203.4 161 60.9
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 3.2e-48 196.1 155 62.6
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 7.1e-48 194.9 135 68.9
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 1.5e-42 177.2 161 54.0
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 5.8e-42 175.3 213 42.3
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 1.9e-40 170.2 230 43.0
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 3.2e-40 169.5 152 55.9
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 1.0e-38 164.5 225 40.4
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 2.1e-36 156.8 239 39.7
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 9.0e-35 151.4 229 34.9
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 4.5e-34 149.1 232 35.8
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 3.2e-32 142.9 160 49.4
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 4.2e-32 142.5 222 34.7
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 9.7e-29 131.3 121 55.4
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 2.2e-28 130.2 72 81.9
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 4.1e-27 125.9 98 66.3
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 8.5e-25 118.2 114 56.1
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 1.7e-20 104.0 214 29.9
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 8.2e-12 75.1 108 47.2
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 8.2e-12 75.1 108 47.2
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 9.4e-08 61.6 43 67.4


User provided reference genes

Program Settings