Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 2.9e-188 661.8 343 100.0
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.6e-125 453.4 344 67.4
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.0e-124 450.7 338 69.2
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.9e-115 419.9 315 67.3
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 4.3e-115 418.7 350 63.7
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 1.6e-114 416.8 343 64.1
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 3.1e-113 412.5 310 67.1
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 3.1e-113 412.5 343 61.8
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 4.0e-113 412.1 310 66.1
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 1.2e-112 410.6 343 61.8
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 1.5e-112 410.2 324 64.8
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 2.0e-112 409.8 343 61.5
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.0e-112 409.8 346 62.7
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 4.5e-112 408.7 302 67.2
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 5.8e-112 408.3 310 65.5
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 1.3e-111 407.1 334 63.2
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 4.9e-111 405.2 302 67.9
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 6.5e-111 404.8 354 60.2
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 1.1e-110 404.1 324 65.1
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 1.9e-110 403.3 354 59.6
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 3.2e-110 402.5 332 63.6
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 4.2e-110 402.1 354 59.3
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 5.5e-110 401.7 332 63.3
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 9.3e-110 401.0 318 64.5
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 9.3e-110 401.0 305 66.6
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 1.2e-109 400.6 372 59.4
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.2e-109 400.6 313 63.3
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.6e-109 400.2 299 65.9
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 3.5e-109 399.1 300 65.3
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 4.6e-109 398.7 302 65.6
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 4.6e-109 398.7 305 66.2
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 6.0e-109 398.3 346 61.6
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 6.0e-109 398.3 346 61.0
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.0e-108 397.5 305 64.3
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 3.9e-108 395.6 355 58.3
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 6.7e-108 394.8 325 62.8
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 1.1e-107 394.0 324 60.8
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.9e-107 393.3 342 58.8
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 2.5e-107 392.9 303 65.3
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 3.3e-107 392.5 315 62.2
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 4.3e-107 392.1 313 63.6
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 4.3e-107 392.1 338 60.4
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 5.7e-107 391.7 353 59.5
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 1.6e-106 390.2 292 64.0
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 2.2e-106 389.8 319 62.7
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 2.8e-106 389.4 308 62.3
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 3.7e-106 389.0 346 59.8
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.1e-105 387.5 317 61.2
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 1.4e-105 387.1 312 62.5
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.4e-105 387.1 313 63.3
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 1.4e-105 387.1 336 58.3
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 1.4e-105 387.1 315 62.5
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 1.4e-105 387.1 313 62.9
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 3.1e-105 386.0 317 60.9
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 5.3e-105 385.2 349 57.9
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.5e-104 383.6 347 57.6
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 1.5e-104 383.6 302 63.9
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 2.6e-104 382.9 303 64.0
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 4.5e-104 382.1 357 56.6
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 7.7e-104 381.3 352 57.1
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 7.7e-104 381.3 342 57.3
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.3e-103 380.6 300 63.3
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.3e-103 380.6 290 64.5
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.9e-103 379.4 310 62.6
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 3.8e-103 379.0 345 56.8
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 1.9e-102 376.7 343 57.1
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 3.2e-102 375.9 346 57.5
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 4.2e-102 375.6 341 57.5
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 7.2e-102 374.8 298 62.1
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 7.2e-102 374.8 312 60.3
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 9.4e-102 374.4 303 61.7
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 7.9e-101 371.3 294 61.2
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 4.3e-99 365.5 352 57.4
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 5.7e-99 365.2 352 57.4
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 1.3e-98 364.0 287 64.1
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 3.7e-98 362.5 216 77.3
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 1.4e-97 360.5 304 62.8
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.8e-97 360.1 353 55.8
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 6.9e-97 358.2 333 61.6
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 6.9e-97 358.2 314 61.1
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 1.5e-96 357.1 322 58.1
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 3.4e-96 355.9 354 55.9
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 3.4e-96 355.9 354 55.9
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 5.9e-96 355.1 338 57.4
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 5.9e-96 355.1 275 64.4
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 5.0e-95 352.1 317 59.3
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 8.5e-95 351.3 311 58.8
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 3.2e-94 349.4 305 60.0
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 4.2e-94 349.0 265 62.3
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.6e-93 347.1 305 59.7
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 4.7e-93 345.5 271 65.7
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 6.1e-93 345.1 267 64.4
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 8.8e-92 341.3 326 55.8
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 1.8e-89 333.6 304 54.6
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 1.4e-86 323.9 231 66.7
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.4e-86 323.9 257 64.6
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 2.3e-84 316.6 315 52.1
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 6.7e-84 315.1 362 51.1
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 3.5e-80 302.8 259 61.8
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 7.7e-72 275.0 284 49.6
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 8.0e-69 265.0 283 48.4
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 1.0e-68 264.6 250 59.2
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 4.0e-68 262.7 309 45.6
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 7.5e-67 258.5 327 42.2
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 2.2e-66 256.9 352 45.2
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 7.2e-62 241.9 228 59.2
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 2.1e-61 240.4 212 57.1
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.4e-60 237.7 231 58.9
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.4e-59 233.0 195 60.5
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 8.3e-58 228.4 305 44.6
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 1.8e-57 227.3 243 45.3
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 6.4e-50 202.2 288 41.3
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.4e-49 201.1 323 39.0
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.2e-45 188.0 180 60.0
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 4.6e-40 169.5 155 54.8
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.9e-30 137.5 112 55.4
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.8e-20 104.4 164 46.3
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 7.3e-14 82.4 117 47.9
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 1.3e-13 81.6 168 39.3
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 3.2e-09 67.0 102 41.2
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 6.7e-07 59.3 33 75.8
SMO172G0225 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.5e-06 57.4 69 44.9


User provided reference genes

Program Settings