Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 7.6e-200 700.3 348 100.0
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 3.1e-153 545.4 312 86.5
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 2.6e-152 542.3 335 80.9
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 1.5e-147 526.6 307 83.7
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 2.5e-147 525.8 305 84.9
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 1.7e-146 523.1 305 84.3
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 8.2e-146 520.8 305 83.0
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 5.3e-145 518.1 326 78.5
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 9.1e-145 517.3 305 83.0
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 9.1e-145 517.3 305 83.9
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 1.5e-144 516.5 309 82.2
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.0e-144 516.2 305 83.6
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 2.0e-144 516.2 323 77.4
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 2.6e-144 515.8 305 83.3
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 4.5e-144 515.0 300 84.0
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.0e-143 513.8 299 85.6
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.3e-143 513.5 301 83.7
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 2.9e-143 512.3 300 83.7
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 3.8e-143 511.9 288 89.2
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 5.0e-143 511.5 323 77.7
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 6.5e-143 511.1 301 82.7
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 1.4e-142 510.0 328 77.7
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 1.9e-142 509.6 327 77.4
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 3.2e-142 508.8 305 83.0
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 3.2e-142 508.8 305 83.0
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 3.2e-142 508.8 305 82.3
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 5.5e-142 508.1 328 77.7
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 3.6e-141 505.4 328 76.8
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.0e-140 503.8 337 73.6
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.4e-140 503.4 337 73.6
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.4e-140 503.4 319 77.1
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 1.4e-140 503.4 305 81.0
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 3.0e-140 502.3 306 81.4
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 3.0e-140 502.3 322 76.4
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 3.9e-140 501.9 305 81.3
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 5.1e-140 501.5 299 82.6
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 6.7e-140 501.1 355 72.7
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 6.7e-140 501.1 317 78.2
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.0e-139 499.6 320 76.9
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 2.0e-139 499.6 347 73.8
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.3e-139 498.8 319 76.5
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 5.7e-139 498.0 307 79.5
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 1.3e-138 496.9 299 82.3
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 2.8e-138 495.7 304 79.3
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 5.3e-137 491.5 326 76.4
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 5.3e-137 491.5 305 79.7
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 5.3e-137 491.5 304 78.9
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 5.3e-137 491.5 304 78.9
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 7.0e-137 491.1 304 78.6
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 1.0e-135 487.3 328 73.8
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 1.3e-135 486.9 323 74.9
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.2e-135 486.1 342 71.3
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 2.2e-135 486.1 304 78.6
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 2.9e-135 485.7 300 80.3
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 3.8e-135 485.3 304 80.6
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 3.8e-135 485.3 305 77.7
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 6.5e-135 484.6 286 82.9
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 6.5e-135 484.6 330 73.9
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.5e-134 483.4 299 79.3
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 1.5e-134 483.4 295 81.0
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.9e-134 483.0 324 74.7
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 4.2e-134 481.9 308 76.3
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 7.2e-134 481.1 283 83.4
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 9.4e-134 480.7 327 73.1
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 9.4e-134 480.7 312 76.3
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 1.2e-133 480.3 328 73.2
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 2.1e-133 479.6 305 78.7
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 3.6e-133 478.8 327 73.7
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 4.7e-133 478.4 327 71.9
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 4.7e-133 478.4 307 75.9
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 6.1e-133 478.0 305 78.7
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 1.0e-132 477.2 331 72.2
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 1.4e-132 476.9 296 78.0
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 1.4e-132 476.9 304 77.0
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 8.8e-132 474.2 304 77.3
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.1e-131 473.8 311 77.5
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 3.3e-131 472.2 328 72.3
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 4.4e-131 471.9 408 63.5
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 7.5e-131 471.1 301 77.7
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.3e-130 470.3 295 77.6
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.9e-128 461.5 290 77.9
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.8e-127 458.8 326 70.2
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.5e-126 456.8 287 77.0
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.9e-126 456.4 289 77.2
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 4.7e-125 451.8 290 77.6
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 4.7e-125 451.8 290 77.6
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 2.0e-123 446.4 267 84.3
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 4.4e-123 445.3 304 73.7
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 1.7e-122 443.4 263 81.4
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 2.2e-122 443.0 288 76.7
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 2.2e-122 443.0 289 77.2
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.8e-122 442.6 254 83.5
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 6.3e-122 441.4 287 75.3
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 8.3e-122 441.0 305 73.4
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 1.3e-119 433.7 291 72.9
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 6.1e-117 424.9 263 79.5
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 4.4e-115 418.7 285 73.7
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 7.5e-115 417.9 265 77.4
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 6.3e-114 414.8 287 71.8
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 1.0e-108 397.5 278 71.9
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 1.7e-106 390.2 328 64.0
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 2.4e-105 386.3 234 82.5
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 3.2e-105 386.0 268 72.4
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 1.6e-104 383.6 278 68.3
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 1.2e-101 374.0 295 61.4
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.2e-99 367.5 297 60.6
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.2e-96 357.5 302 58.9
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 1.6e-96 357.1 297 60.3
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 2.7e-96 356.3 270 65.6
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 6.0e-96 355.1 287 64.8
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 1.0e-87 327.8 223 72.2
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 6.2e-85 318.5 233 66.1
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 6.8e-84 315.1 198 76.3
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.2e-83 314.3 222 69.8
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 1.5e-83 313.9 316 49.7
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 6.2e-77 292.0 225 67.1
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 6.4e-66 255.4 348 40.5
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.5e-54 217.6 181 64.1
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 6.2e-53 212.2 150 74.0
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 7.1e-49 198.7 143 69.9
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 3.0e-47 193.4 314 36.9
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 8.2e-45 185.3 107 78.5
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 7.6e-43 178.7 129 68.2
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.9e-34 150.2 97 75.3
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 7.2e-33 145.6 261 35.6
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 6.5e-18 95.9 82 56.1
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 3.6e-16 90.1 70 65.7
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.6e-11 74.7 50 74.0


User provided reference genes

Program Settings