Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 7.5e-33 143.3 73 100.0
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 2.3e-26 121.7 73 84.9
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 2.8e-24 114.8 73 79.5
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 2.8e-24 114.8 73 78.1
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 2.8e-24 114.8 73 78.1
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 2.8e-24 114.8 73 78.1
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 6.3e-24 113.6 70 81.4
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 1.8e-23 112.1 70 80.0
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 1.8e-23 112.1 73 76.7
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 2.4e-23 111.7 70 80.0
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 2.4e-23 111.7 70 80.0
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 5.4e-23 110.5 70 78.6
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 9.1e-23 109.8 69 76.8
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 1.2e-22 109.4 70 78.6
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 1.2e-22 109.4 73 76.7
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 1.6e-22 109.0 70 75.7
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 1.6e-22 109.0 73 74.0
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 2.0e-22 108.6 73 75.3
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 2.0e-22 108.6 70 75.7
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 2.0e-22 108.6 74 75.7
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 2.7e-22 108.2 69 78.3
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 2.7e-22 108.2 70 75.7
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 3.5e-22 107.8 70 77.1
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 3.5e-22 107.8 70 77.1
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 3.5e-22 107.8 70 75.7
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 4.5e-22 107.5 70 77.1
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 4.5e-22 107.5 67 79.1
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 5.9e-22 107.1 64 84.4
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 5.9e-22 107.1 69 78.3
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 1.0e-21 106.3 64 81.2
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 1.0e-21 106.3 64 81.2
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 1.3e-21 105.9 69 78.3
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 1.3e-21 105.9 69 78.3
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 1.7e-21 105.5 73 75.3
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 1.7e-21 105.5 66 80.3
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 2.3e-21 105.1 66 78.8
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 2.3e-21 105.1 73 75.3
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 2.3e-21 105.1 66 78.8
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 2.3e-21 105.1 66 78.8
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 2.3e-21 105.1 70 75.7
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 2.9e-21 104.8 66 78.8
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 2.9e-21 104.8 66 80.3
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 3.8e-21 104.4 65 81.5
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 6.6e-21 103.6 73 74.0
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 6.6e-21 103.6 73 74.0
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 6.6e-21 103.6 66 77.3
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 8.6e-21 103.2 66 80.3
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 1.1e-20 102.8 70 74.3
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 3.3e-20 101.3 70 72.9
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 3.3e-20 101.3 66 78.8
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 4.2e-20 100.9 70 71.4
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 4.2e-20 100.9 70 74.3
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 7.2e-20 100.1 69 71.0
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 7.2e-20 100.1 70 71.4
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 1.6e-19 99.0 74 73.0
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 2.1e-19 98.6 64 75.0
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 2.1e-19 98.6 63 79.4
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.4e-18 95.9 68 72.1
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 1.4e-18 95.9 67 71.6
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 1.4e-18 95.9 63 77.8
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 4.4e-17 90.9 57 77.2
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 1.3e-16 89.4 57 73.7
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 8.3e-16 86.7 57 71.9
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 1.1e-15 86.3 58 69.0
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 1.1e-15 86.3 54 74.1
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 3.2e-15 84.7 49 79.6
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 1.2e-14 82.8 55 76.4
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 1.2e-14 82.8 54 68.5
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 4.6e-14 80.9 49 79.6
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.3e-13 79.3 50 78.0
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.3e-13 79.3 50 78.0
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 1.3e-13 79.3 57 70.2
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 2.9e-13 78.2 54 68.5
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 2.9e-13 78.2 47 76.6
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 6.6e-13 77.0 54 68.5
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 6.6e-13 77.0 54 68.5
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 5.6e-12 73.9 57 66.7
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 6.1e-11 70.5 45 77.8
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 2.3e-10 68.6 41 82.9
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 4.0e-10 67.8 53 64.2
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 8.9e-10 66.6 48 68.8
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 8.9e-10 66.6 59 55.9
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 2.9e-08 61.6 46 69.6
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 1.2e-06 56.2 32 78.1


User provided reference genes

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