Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 2.5e-70 268.9 158 100.0
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 1.6e-19 100.1 159 48.4
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 1.9e-17 93.2 69 76.8
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 4.3e-17 92.0 156 46.2
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 4.7e-16 88.6 118 52.5
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 1.8e-15 86.7 70 71.4
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 2.3e-15 86.3 70 71.4
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 2.3e-15 86.3 70 71.4
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 2.3e-15 86.3 70 72.9
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 3.1e-15 85.9 70 72.9
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 4.0e-15 85.5 162 42.0
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 1.2e-14 84.0 69 63.8
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 5.8e-14 81.6 69 63.8
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 5.8e-14 81.6 156 43.6
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 7.5e-14 81.3 70 65.7
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 7.5e-14 81.3 70 65.7
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 6.4e-13 78.2 154 44.2
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 1.4e-12 77.0 70 62.9
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 2.4e-12 76.3 70 60.0
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 5.4e-12 75.1 70 62.9
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 7.1e-12 74.7 170 42.9
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 1.2e-11 73.9 70 62.9
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 1.6e-11 73.6 70 62.9
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 1.6e-11 73.6 70 60.0
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 1.6e-11 73.6 149 40.9
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 2.1e-11 73.2 70 58.6
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 4.6e-11 72.0 70 61.4
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 4.6e-11 72.0 70 61.4
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 7.8e-11 71.2 70 61.4
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 7.8e-11 71.2 70 60.0
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 7.8e-11 71.2 59 69.5
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 1.7e-10 70.1 115 45.2
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 1.7e-10 70.1 63 63.5
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 2.3e-10 69.7 70 58.6
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 2.3e-10 69.7 63 61.9
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 3.0e-10 69.3 109 45.0
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 8.6e-10 67.8 63 58.7
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 8.6e-10 67.8 63 58.7
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 8.6e-10 67.8 63 58.7
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 2.5e-09 66.2 104 43.3
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 5.6e-09 65.1 70 57.1
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 5.6e-09 65.1 68 54.4
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 5.6e-09 65.1 70 57.1
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 7.3e-09 64.7 63 55.6
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 7.3e-09 64.7 70 57.1
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 7.3e-09 64.7 70 52.9
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 1.6e-08 63.5 70 54.3
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 3.6e-08 62.4 63 61.9
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 4.7e-08 62.0 70 57.1
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 4.7e-08 62.0 70 57.1
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 8.1e-08 61.2 63 57.1
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 1.1e-07 60.8 70 55.7
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 1.1e-07 60.8 70 54.3
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 1.4e-07 60.5 61 59.0
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 4.0e-07 58.9 114 39.5
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 4.0e-07 58.9 63 57.1
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 6.8e-07 58.2 144 38.9
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 2.0e-06 56.6 70 52.9
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 2.6e-06 56.2 97 43.3
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 2.6e-06 56.2 144 38.2
AUR62023336 Chenopodium quinoa HOM05D008143 ORTHO05D010256 5.8e-06 55.1 57 61.4


User provided reference genes

Program Settings