Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01693 Erythranthe guttata HOM05D018604 ORTHO05D011584 2.6e-62 241.9 122 100.0
MSTRG.4981 Avicennia marina HOM05D018604 ORTHO05D011584 1.2e-19 100.1 137 47.4
SGA_v2.0_scaffold4G02205 Striga asiatica HOM05D018604 ORTHO05D011584 2.7e-11 72.4 125 38.4
CiPaw.07G074600 Carya illinoinensis HOM05D001218 ORTHO05D011584 1.0e-10 70.5 64 64.1
Dinv43989 Davidia involucrata HOM05D001218 ORTHO05D011584 3.0e-10 68.9 57 64.9
Lsat_1_v5_gn_4_41880 Lactuca sativa HOM05D018604 ORTHO05D011584 4.3e-09 65.1 55 56.4
Cc02_g26170 Coffea canephora HOM05D001218 ORTHO05D011584 1.6e-08 63.2 57 57.9
Peaxi162Scf00901g00419 Petunia axillaris HOM05D018604 ORTHO05D011584 1.6e-08 63.2 121 36.4
Atru.chr8.848 Acer truncatum HOM05D001218 ORTHO05D011584 2.1e-08 62.8 48 64.6
Nn1g08050 Nelumbo nucifera HOM05D001218 ORTHO05D004088 6.2e-08 61.2 57 59.6
Potri.006G024500 Populus trichocarpa HOM05D001218 ORTHO05D011584 6.2e-08 61.2 72 48.6
Ciclev10013226m.g Citrus clementina HOM05D001218 ORTHO05D011584 1.1e-07 60.5 57 52.6
Sabra06G0017900 Salix brachista HOM05D001218 ORTHO05D011584 3.1e-07 58.9 57 49.1
Eucgr.E01760 Eucalyptus grandis HOM05D001218 ORTHO05D011584 9.0e-07 57.4 57 57.9
Mapoly0105s0043 Marchantia polymorpha HOM05D001218 ORTHO05D004088 9.0e-07 57.4 51 52.9
PSO210G6488 Papaver somniferum HOM05D001218 ORTHO05D004088 1.2e-06 57.0 74 44.6
GSVIVG01026761001 Vitis vinifera HOM05D001218 ORTHO05D011584 1.2e-06 57.0 55 54.5
PSO210G1993 Papaver somniferum HOM05D001218 ORTHO05D004088 1.5e-06 56.6 75 44.0
ECA234G3066 Erigeron canadensis HOM05D018604 ORTHO05D011584 2.0e-06 56.2 109 37.6
COL.COLO4_30953 Corchorus olitorius HOM05D001218 ORTHO05D011584 2.6e-06 55.8 72 45.8
ClCG09G001500 Citrullus lanatus HOM05D001218 ORTHO05D011584 3.4e-06 55.5 57 52.6
Duzib235G1528 Durio zibethinus HOM05D001218 ORTHO05D011584 3.4e-06 55.5 72 47.2
TAR375G0723 Trochodendron aralioides HOM05D001218 ORTHO05D004088 3.4e-06 55.5 75 42.7
Eucgr.F01823 Eucalyptus grandis HOM05D001218 ORTHO05D004088 4.5e-06 55.1 110 35.5
Lsat_1_v5_gn_8_26721 Lactuca sativa HOM05D001218 ORTHO05D004088 4.5e-06 55.1 49 51.0
Manes.05G129500 Manihot esculenta HOM05D001218 ORTHO05D004088 4.5e-06 55.1 113 33.6
TWI36G0968 Tripterygium wilfordii HOM05D001218 ORTHO05D004088 4.5e-06 55.1 110 36.4
ECA233G0383 Erigeron canadensis HOM05D001218 ORTHO05D004088 5.8e-06 54.7 49 51.0
ECA233G6219 Erigeron canadensis HOM05D001218 ORTHO05D004088 5.8e-06 54.7 49 51.0
SMO115G0046 Selaginella moellendorffii HOM05D001218 ORTHO05D004088 5.8e-06 54.7 51 54.9
TWI12G0956 Tripterygium wilfordii HOM05D001218 ORTHO05D004088 5.8e-06 54.7 110 34.5
MBI04_g22928_MAGBIO Magnolia biondii HOM05D001218 ORTHO05D004088 7.6e-06 54.3 48 52.1
Manes.18G001100 Manihot esculenta HOM05D001218 ORTHO05D004088 7.6e-06 54.3 71 40.8
PSO017G6550 Papaver somniferum HOM05D001218 ORTHO05D004088 7.6e-06 54.3 99 34.3
PSO170G0003 Papaver somniferum HOM05D001218 ORTHO05D004088 7.6e-06 54.3 99 34.3
PGR031G3703 Punica granatum HOM05D001218 ORTHO05D004088 7.6e-06 54.3 92 34.8
PGR042G3445 Punica granatum HOM05D018604 ORTHO05D011584 7.6e-06 54.3 57 49.1
Zm00001eb188910 Zea mays HOM05D001218 ORTHO05D004088 7.6e-06 54.3 77 39.0
Actinidia30977 Actinidia chinensis HOM05D001218 ORTHO05D011584 1.0e-05 53.9 57 50.9
HanXRQChr08g0216771 Helianthus annuus HOM05D001218 ORTHO05D004088 1.0e-05 53.9 54 46.3
Zm00001eb252630 Zea mays HOM05D001218 ORTHO05D004088 1.0e-05 53.9 76 38.2


User provided reference genes

Program Settings