Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01664 Erythranthe guttata HOM05D004925 ORTHO05D005643 2.9e-150 535.4 311 100.0
MSTRG.5000 Avicennia marina HOM05D004925 ORTHO05D005643 2.7e-100 369.4 300 68.7
SalBow4G1354 Salvia bowleyana HOM05D004925 ORTHO05D005643 1.1e-96 357.5 326 69.9
SalBow4G3044 Salvia bowleyana HOM05D004925 ORTHO05D005643 3.5e-95 352.4 326 69.6
SGA_v2.0_scaffold95G28775 Striga asiatica HOM05D004925 ORTHO05D005643 4.8e-81 305.4 316 63.0
Oeu053533.1 Olea europaea HOM05D004925 ORTHO05D005643 7.0e-72 275.0 301 56.1
Oeu024926.1 Olea europaea HOM05D004925 ORTHO05D005643 6.8e-67 258.5 395 46.3
Sopen01g033490 Solanum pennellii HOM05D004925 ORTHO05D005643 1.5e-66 257.3 312 51.0
Solyc01g073920.3 Solanum lycopersicum HOM05D004925 ORTHO05D005643 4.4e-66 255.8 312 50.6
Peaxi162Scf00878g00036 Petunia axillaris HOM05D004925 ORTHO05D005643 6.3e-65 251.9 307 50.8
SGA_v2.0_scaffold4G02236 Striga asiatica HOM05D001227 ORTHO05D001082 7.8e-63 245.0 267 54.7
CAN.G261.6 Capsicum annuum HOM05D004925 ORTHO05D005643 1.7e-57 227.3 203 62.1
Nitab4.5_0000892g0140 Nicotiana tabacum HOM05D004925 ORTHO05D005643 3.2e-56 223.0 349 44.1
Dinv43931 Davidia involucrata HOM05D004925 ORTHO05D005643 7.0e-56 221.9 265 52.1
Dinv43491 Davidia involucrata HOM05D004925 ORTHO05D005643 2.7e-55 219.9 267 50.9
unitig_22.g5889 Utricularia gibba HOM05D004925 ORTHO05D005643 3.5e-55 219.5 312 48.4
Hma1.2p1_0860F.1_g229570 Hydrangea macrophylla HOM05D004925 ORTHO05D005643 1.5e-53 214.2 263 49.4
Rhsim01G0134400 Rhododendron simsii HOM05D004925 ORTHO05D005643 6.4e-49 198.7 265 47.9
CiPaw.13G000800 Carya illinoinensis HOM05D004925 ORTHO05D005643 2.4e-48 196.8 253 50.6
GSVIVG01001367001 Vitis vinifera HOM05D004925 ORTHO05D005643 4.6e-47 192.6 312 44.9
Cc02_g27070 Coffea canephora HOM05D004925 ORTHO05D005643 1.5e-45 187.6 275 46.2
Nn2g15712 Nelumbo nucifera HOM05D004925 ORTHO05D005643 6.2e-44 182.2 308 42.5
vmacro12585 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 1.1e-43 181.4 316 41.8
MD07G1002600 Malus domestica HOM05D004925 ORTHO05D005643 3.1e-43 179.9 249 46.6
Actinidia15855 Actinidia chinensis HOM05D004925 ORTHO05D005643 4.0e-43 179.5 258 46.1
Manes.10G151100 Manihot esculenta HOM05D004925 ORTHO05D005643 1.5e-42 177.6 292 43.5
ClCG10G012660 Citrullus lanatus HOM05D004925 ORTHO05D005643 5.8e-42 175.6 250 50.0
MD02G1318600 Malus domestica HOM05D004925 ORTHO05D005643 5.8e-42 175.6 263 47.5
Potri.001G229800 Populus trichocarpa HOM05D004925 ORTHO05D005643 5.8e-42 175.6 333 42.3
TWI09G1281 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 5.8e-42 175.6 265 45.7
Cfa004806 Carpinus fangiana HOM05D004925 ORTHO05D005643 4.1e-40 169.5 271 44.3
TAR369G0809 Trochodendron aralioides HOM05D004925 ORTHO05D005643 4.1e-40 169.5 254 45.7
Gohir.A08G026720 Gossypium hirsutum HOM05D004925 ORTHO05D005643 5.4e-40 169.1 253 44.7
CsaV3_3G032460 Cucumis sativus L. HOM05D004925 ORTHO05D005643 7.1e-40 168.7 250 47.2
Gorai.004G035400 Gossypium raimondii HOM05D004925 ORTHO05D005643 9.2e-40 168.3 242 45.9
TWI73G1095 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 9.2e-40 168.3 275 43.3
TAR623G0394 Trochodendron aralioides HOM05D004925 ORTHO05D005643 2.1e-39 167.2 260 44.6
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 4.6e-39 166.0 258 45.0
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 4.6e-39 166.0 258 45.0
AL4G28340 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 1.0e-38 164.9 253 45.5
COL.COLO4_25137 Corchorus olitorius HOM05D004925 ORTHO05D005643 1.0e-38 164.9 247 45.3
Thecc.01G416300 Theobroma cacao HOM05D004925 ORTHO05D005643 1.0e-38 164.9 249 45.0
Gohir.D08G037401 Gossypium hirsutum HOM05D004925 ORTHO05D005643 1.7e-38 164.1 169 55.0
CANSAT11G0505 Cannabis sativa HOM05D004925 ORTHO05D005643 3.0e-38 163.3 268 43.3
Eucgr.G03409 Eucalyptus grandis HOM05D004925 ORTHO05D005643 3.0e-38 163.3 228 49.6
Lsat_1_v5_gn_1_110881 Lactuca sativa HOM05D004925 ORTHO05D005643 5.1e-38 162.5 260 43.8
FAN01G2076 Fragaria x ananassa HOM05D004925 ORTHO05D005643 6.6e-38 162.2 245 45.7
THA.LOC104801020 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 1.1e-37 161.4 254 45.7
Atru.chr11.2695 Acer truncatum HOM05D004925 ORTHO05D005643 1.5e-37 161.0 274 41.2
RcHm_v2.0_Chr1g0313411 Rosa chinensis HOM05D004925 ORTHO05D005643 1.9e-37 160.6 229 46.7
Sc17g0006850 Simmondsia chinensis HOM05D004925 ORTHO05D005643 2.5e-37 160.2 252 43.7
FvH4_7g00160 Fragaria vesca HOM05D004925 ORTHO05D005643 3.6e-36 156.4 248 44.0
CARHR126790 Cardamine hirsuta HOM05D004925 ORTHO05D005643 6.2e-36 155.6 251 43.4
FAN06G2494 Fragaria x ananassa HOM05D004925 ORTHO05D005643 1.4e-35 154.5 158 56.3
FAN10G2396 Fragaria x ananassa HOM05D004925 ORTHO05D005643 1.4e-35 154.5 158 56.3
Duzib114G0283 Durio zibethinus HOM05D004925 ORTHO05D005643 3.1e-35 153.3 249 43.0
Sed0003173 Sechium edule HOM05D004925 ORTHO05D005643 3.1e-35 153.3 157 57.3
FAN01G0312 Fragaria x ananassa HOM05D004925 ORTHO05D005643 5.2e-35 152.5 249 44.2
FAN03G1097 Fragaria x ananassa HOM05D004925 ORTHO05D005643 5.2e-35 152.5 245 44.1
HanXRQChr01g0018661 Helianthus annuus HOM05D004925 ORTHO05D005643 5.2e-35 152.5 247 43.3
ECA248G0029 Erigeron canadensis HOM05D004925 ORTHO05D005643 6.8e-35 152.1 230 42.2
MELO3C030929.2 Cucumis melo HOM05D004925 ORTHO05D005643 8.9e-35 151.8 303 39.3
Thhalv10016920m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 1.2e-34 151.4 250 42.8
Nitab4.5_0005278g0010 Nicotiana tabacum HOM05D004925 ORTHO05D005643 1.2e-34 151.4 292 43.8
AT2G32840 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 1.5e-34 151.0 254 42.5
Carub.0004s1427 Capsella rubella HOM05D004925 ORTHO05D005643 1.5e-34 151.0 249 43.0
Sp4g15220 Schrenkiella parvula HOM05D004925 ORTHO05D005643 7.6e-34 148.7 292 38.7
vmacro21158 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 2.2e-33 147.1 324 37.3
arahy.Tifrunner.gnm1.ann1.WEBP2W Arachis hypogaea HOM05D004925 ORTHO05D005643 4.9e-33 146.0 249 41.4
Actinidia21578 Actinidia chinensis HOM05D004925 ORTHO05D005643 1.9e-32 144.1 158 52.5
MBI19_g23208_MAGBIO Magnolia biondii HOM05D004925 ORTHO05D005643 1.9e-32 144.1 328 36.6
Hund25510 Selenicereus undatus HOM05D004925 ORTHO05D005643 1.9e-32 144.1 261 41.0
PSO384G4128 Papaver somniferum HOM05D004925 ORTHO05D005643 3.2e-32 143.3 234 42.7
Sed0010000 Sechium edule HOM05D004925 ORTHO05D005643 3.2e-32 143.3 246 43.1
QL04p000066 Quercus lobata HOM05D004925 ORTHO05D005643 1.2e-31 141.4 275 40.4
Ca_02951_v3 Cicer arietinum L. HOM05D004925 ORTHO05D005643 1.6e-31 141.0 244 44.3
Ciclev10032226m.g Citrus clementina HOM05D004925 ORTHO05D005643 1.6e-31 141.0 271 39.5
Aqoxy1G00133 Aquilegia oxysepala HOM05D004925 ORTHO05D005643 2.7e-31 140.2 210 43.8
BcaB02g10501 Brassica carinata HOM05D004925 ORTHO05D005643 2.3e-30 137.1 285 38.6
Sp1g03770 Schrenkiella parvula HOM05D004925 ORTHO05D005643 3.9e-30 136.3 257 42.4
BolC4t23220H Brassica oleracea HOM05D004925 ORTHO05D005643 5.1e-30 136.0 249 41.8
Cpa.g.sc189.17 Carica papaya HOM05D004925 ORTHO05D005643 6.6e-30 135.6 144 56.2
Aa31LG5G4490 Aethionema arabicum HOM05D004925 ORTHO05D005643 8.7e-30 135.2 254 43.7
A05p12810 Brassica napus HOM05D004925 ORTHO05D005643 8.7e-30 135.2 246 43.1
arahy.Tifrunner.gnm1.ann1.BFX48A Arachis hypogaea HOM05D004925 ORTHO05D005643 1.5e-29 134.4 263 39.2
C04p16720 Brassica napus HOM05D004925 ORTHO05D005643 2.5e-29 133.7 292 39.7
Medtr2g060910 Medicago truncatula HOM05D004925 ORTHO05D005643 3.3e-29 133.3 234 42.7
HanXRQChr11g0341641 Helianthus annuus HOM05D004925 ORTHO05D005643 7.3e-29 132.1 201 45.8
Phvul.005G039900 Phaseolus vulgaris HOM05D004925 ORTHO05D005643 2.8e-28 130.2 253 36.8
Prupe.2G004100 Prunus persica HOM05D004925 ORTHO05D005643 4.8e-28 129.4 260 40.4
BraA05t20219Z Brassica rapa HOM05D004925 ORTHO05D005643 8.1e-28 128.6 262 41.2
HanXRQChr11g0341651 Helianthus annuus HOM05D004925 ORTHO05D005643 8.1e-28 128.6 191 47.1
A10p03360 Brassica napus HOM05D004925 ORTHO05D005643 1.1e-27 128.3 259 39.8
PGR119G0958 Punica granatum HOM05D004925 ORTHO05D005643 1.4e-27 127.9 248 40.3
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 2.4e-27 127.1 288 34.7
QL04p003160 Quercus lobata HOM05D004925 ORTHO05D005643 5.3e-27 125.9 365 34.5
CDE04G0753 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 1.5e-26 124.4 254 39.8
Lj3g0011601 Lotus japonicus HOM05D004925 ORTHO05D005643 1.5e-26 124.4 280 38.9
PSO339G6120 Papaver somniferum HOM05D004925 ORTHO05D005643 1.5e-26 124.4 235 40.0
BcaB01g00977 Brassica carinata HOM05D004925 ORTHO05D005643 2.0e-26 124.0 158 48.7
Glyma.08G148900 Glycine max HOM05D004925 ORTHO05D005643 2.6e-26 123.6 252 41.3
HanXRQChr11g0341871 Helianthus annuus HOM05D004925 ORTHO05D005643 2.6e-26 123.6 136 52.2
TPR.G11699 Trifolium pratense HOM05D004925 ORTHO05D005643 5.8e-26 122.5 150 52.0
Lalb_Chr03g0033881 Lupinus albus HOM05D004925 ORTHO05D005643 7.6e-26 122.1 163 47.9
Thhalv10009447m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 9.9e-26 121.7 154 50.6
C05p03080 Brassica napus HOM05D004925 ORTHO05D005643 2.2e-25 120.6 161 47.2
Lalb_Chr25g0283541 Lupinus albus HOM05D004925 ORTHO05D005643 2.9e-25 120.2 239 38.5
Glyma.15G269200 Glycine max HOM05D004925 ORTHO05D005643 6.4e-25 119.0 260 36.9
BraA10t42612Z Brassica rapa HOM05D004925 ORTHO05D005643 3.2e-24 116.7 280 34.6
BolC5t29090H Brassica oleracea HOM05D004925 ORTHO05D005643 3.5e-23 113.2 153 47.7
Medtr4g125960 Medicago truncatula HOM05D004925 ORTHO05D005643 1.0e-22 111.7 219 41.6
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 1.3e-22 111.3 349 30.1
AUR62015612 Chenopodium quinoa HOM05D004925 ORTHO05D005643 3.0e-22 110.2 166 44.0
CARHR004330 Cardamine hirsuta HOM05D004925 ORTHO05D005643 6.6e-22 109.0 154 47.4
THA.LOC104816029 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 6.6e-22 109.0 162 45.7
AT1G04930 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 3.3e-21 106.7 249 38.2
Lj7A564G31 Lonicera japonica HOM05D004925 ORTHO05D005643 5.6e-21 105.9 98 54.1
PGSC0003DMG400006329 Solanum tuberosum HOM05D004925 ORTHO05D005643 2.1e-20 104.0 275 34.5
EL10Ac8g20283 Beta vulgaris HOM05D004925 ORTHO05D005643 5.3e-19 99.4 201 37.8
Aa31LG1G19930 Aethionema arabicum HOM05D004925 ORTHO05D005643 9.0e-19 98.6 237 34.6
Zm00001eb399260 Zea mays HOM05D004925 ORTHO05D005643 4.5e-18 96.3 246 35.4
SEGI_38326 Sequoiadendron giganteum HOM05D004925 ORTHO05D005643 1.7e-17 94.4 181 39.8
Rhsim06G0015600 Rhododendron simsii HOM05D004925 ORTHO05D005643 8.4e-17 92.0 296 31.4
ATR0598G164 Amborella trichopoda HOM05D004925 ORTHO05D005643 2.1e-15 87.4 243 35.8
CDE06G1226 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 2.1e-15 87.4 248 34.3
Oeu013586.1 Olea europaea HOM05D004925 ORTHO05D005643 3.5e-15 86.7 56 73.2
Mapoly0040s0118 Marchantia polymorpha HOM05D004925 ORTHO05D005643 7.9e-15 85.5 165 40.0
HanXRQChr11g0341671 Helianthus annuus HOM05D004925 ORTHO05D005643 1.8e-14 84.3 171 41.5
AL1G14650 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 2.5e-13 80.5 249 32.9
CSS0015862 Camellia sinensis var. sinensis HOM05D004925 ORTHO05D005643 1.6e-12 77.8 136 41.2
HPP92_020314 Vanilla planifolia HOM05D004925 ORTHO05D005643 3.7e-12 76.6 146 40.4
Sabra16G0137200 Salix brachista HOM05D004925 ORTHO05D005643 6.2e-12 75.9 98 50.0
CSS0038538 Camellia sinensis var. sinensis HOM05D004925 ORTHO05D005643 1.4e-11 74.7 64 56.2
A09p67630 Brassica napus HOM05D004925 ORTHO05D005643 6.9e-11 72.4 108 45.4
Pp3c22_21740 Physcomitrium patens HOM05D004925 ORTHO05D005643 1.5e-10 71.2 170 36.5
Haze_10406 Corylus avellana HOM05D004925 ORTHO05D005643 2.2e-09 67.4 64 56.2
Sabra16G0137500 Salix brachista HOM05D004925 ORTHO05D005643 9.3e-08 62.0 156 40.4
SMO137G0159 Selaginella moellendorffii HOM05D004925 ORTHO05D005643 2.7e-07 60.5 217 29.5
Os03g0234600 Oryza sativa ssp. japonica HOM05D004925 ORTHO05D005643 3.5e-07 60.1 151 36.4
BcaB03g16450 Brassica carinata HOM05D000563 ORTHO05D005643 1.8e-06 57.8 136 33.8
BraA09t42096Z Brassica rapa HOM05D000053 ORTHO05D000035 3.0e-06 57.0 81 43.2
BcaB03g16451 Brassica carinata HOM05D004925 ORTHO05D005643 3.9e-06 56.6 128 33.6


User provided reference genes

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