Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 2.3e-67 258.8 138 100.0
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 2.0e-66 255.8 138 99.3
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 8.5e-54 213.8 138 81.2
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 9.4e-53 210.3 137 80.3
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 9.4e-53 210.3 137 80.3
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 3.6e-44 181.8 134 69.4
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 1.5e-42 176.4 129 73.6
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 2.6e-42 175.6 144 64.6
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 3.4e-42 175.3 114 77.2
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 5.7e-42 174.5 135 68.9
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 9.8e-42 173.7 129 70.5
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 9.8e-42 173.7 129 69.8
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 1.3e-41 173.3 115 78.3
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.3e-41 173.3 138 68.1
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 1.7e-41 172.9 134 68.7
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 1.7e-41 172.9 135 70.4
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.7e-41 172.9 138 68.1
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 2.2e-41 172.6 128 71.9
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 4.8e-41 171.4 113 77.9
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 6.3e-41 171.0 126 73.8
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 8.3e-41 170.6 133 66.9
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 1.1e-40 170.2 115 74.8
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.4e-40 169.9 114 75.4
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 3.1e-40 168.7 138 65.2
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 5.4e-40 167.9 134 67.2
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 5.4e-40 167.9 126 72.2
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 7.0e-40 167.5 115 74.8
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 7.0e-40 167.5 134 67.2
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 7.0e-40 167.5 128 69.5
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 9.1e-40 167.2 135 69.6
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 1.6e-39 166.4 128 70.3
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 1.6e-39 166.4 134 66.4
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 2.0e-39 166.0 114 72.8
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 2.0e-39 166.0 114 72.8
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 2.0e-39 166.0 120 70.8
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 2.0e-39 166.0 115 74.8
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 3.5e-39 165.2 128 69.5
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 4.5e-39 164.9 127 69.3
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 4.5e-39 164.9 128 67.2
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 4.5e-39 164.9 120 70.8
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 4.5e-39 164.9 131 66.4
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 5.9e-39 164.5 113 75.2
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 5.9e-39 164.5 116 72.4
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 7.7e-39 164.1 115 73.9
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 7.7e-39 164.1 113 74.3
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.7e-38 162.9 134 64.2
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 1.7e-38 162.9 131 66.4
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 2.2e-38 162.5 134 66.4
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 2.2e-38 162.5 112 74.1
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 2.2e-38 162.5 123 69.9
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 2.9e-38 162.2 121 70.2
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 2.9e-38 162.2 113 73.5
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 3.8e-38 161.8 115 72.2
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 3.8e-38 161.8 122 70.5
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 6.5e-38 161.0 128 67.2
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 8.5e-38 160.6 120 67.5
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 8.5e-38 160.6 134 63.4
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 8.5e-38 160.6 124 68.5
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 1.1e-37 160.2 126 66.7
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 1.5e-37 159.8 128 67.2
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 1.5e-37 159.8 121 69.4
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 1.5e-37 159.8 131 64.9
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 3.2e-37 158.7 121 66.1
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 5.5e-37 157.9 128 65.6
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 7.2e-37 157.5 112 73.2
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 7.2e-37 157.5 112 73.2
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 7.2e-37 157.5 112 73.2
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 9.4e-37 157.1 121 66.9
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 9.4e-37 157.1 121 66.9
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.2e-36 156.8 125 64.0
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 2.1e-36 156.0 113 71.7
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 3.6e-36 155.2 112 71.4
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 3.6e-36 155.2 112 71.4
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 6.1e-36 154.5 125 63.2
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 8.0e-36 154.1 118 70.3
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 1.4e-35 153.3 120 68.3
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 1.4e-35 153.3 116 70.7
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 1.8e-35 152.9 158 56.3
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 2.3e-35 152.5 113 69.0
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 5.2e-35 151.4 117 67.5
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 6.8e-35 151.0 112 69.6
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 8.8e-35 150.6 117 66.7
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.2e-34 150.2 108 72.2
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.2e-34 150.2 115 67.0
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.3e-33 146.7 107 69.2
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.3e-33 146.7 108 71.3
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 2.2e-33 146.0 118 67.8
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 1.8e-32 142.9 110 68.2
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 2.7e-31 139.0 138 58.7
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 1.3e-30 136.7 104 65.4
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 3.3e-29 132.1 113 59.3
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 3.3e-29 132.1 115 60.0
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 6.8e-27 124.4 110 60.9
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 8.9e-27 124.0 113 59.3
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 4.9e-25 118.2 109 61.5
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.1e-24 117.1 104 62.5
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 5.4e-24 114.8 100 63.0
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 5.4e-24 114.8 114 53.5
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 4.6e-23 111.7 95 64.2
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.1e-21 107.1 107 55.1
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 3.6e-20 102.1 74 68.9
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 5.2e-19 98.2 123 43.9
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 2.6e-18 95.9 95 60.0
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 3.5e-15 85.5 64 60.9
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 8.6e-14 80.9 120 35.0
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 7.3e-13 77.8 119 38.7
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 6.2e-12 74.7 54 72.2
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 1.9e-08 63.2 45 62.2


User provided reference genes

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