Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01635 Erythranthe guttata HOM05D006036 ORTHO05D007736 7.5e-71 270.4 136 100.0
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 5.6e-42 174.5 144 66.7
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 2.8e-41 172.2 131 67.9
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 4.5e-39 164.9 124 68.5
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 8.4e-38 160.6 135 60.7
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 4.2e-37 158.3 122 66.4
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 5.5e-37 157.9 140 62.1
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 5.5e-37 157.9 120 65.8
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 9.3e-37 157.1 99 76.8
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 9.3e-37 157.1 133 63.2
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 9.3e-37 157.1 110 70.0
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 2.1e-36 156.0 108 72.2
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 2.7e-36 155.6 138 60.9
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 3.5e-36 155.2 142 57.7
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 7.9e-36 154.1 135 60.0
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 1.0e-35 153.7 91 78.0
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 1.3e-35 153.3 137 61.3
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 1.8e-35 152.9 133 63.2
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 2.3e-35 152.5 114 65.8
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 3.0e-35 152.1 139 59.0
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 8.7e-35 150.6 119 62.2
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 8.7e-35 150.6 112 67.0
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 1.5e-34 149.8 136 58.8
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 1.5e-34 149.8 138 60.1
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 1.5e-34 149.8 115 66.1
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 1.9e-34 149.4 136 58.1
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 1.9e-34 149.4 135 54.8
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 1.9e-34 149.4 140 57.1
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 2.5e-34 149.1 141 58.2
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 2.5e-34 149.1 121 59.5
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 3.3e-34 148.7 110 62.7
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 4.3e-34 148.3 141 58.9
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 7.4e-34 147.5 138 59.4
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 7.4e-34 147.5 125 63.2
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 9.6e-34 147.1 138 58.7
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 9.6e-34 147.1 126 59.5
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 1.3e-33 146.7 134 56.0
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 1.3e-33 146.7 110 66.4
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.3e-33 146.7 121 62.0
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 1.3e-33 146.7 138 53.6
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 2.8e-33 145.6 139 58.3
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 3.7e-33 145.2 138 58.0
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 4.8e-33 144.8 138 57.2
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 4.8e-33 144.8 116 63.8
COL.COLO4_12549 Corchorus olitorius HOM05D006036 ORTHO05D007736 6.2e-33 144.4 109 67.0
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 6.2e-33 144.4 110 66.4
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 6.2e-33 144.4 138 55.1
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 6.2e-33 144.4 138 58.0
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 6.2e-33 144.4 111 66.7
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 1.1e-32 143.7 88 78.4
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 1.4e-32 143.3 141 53.9
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 1.4e-32 143.3 134 61.2
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 1.8e-32 142.9 146 53.4
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 2.4e-32 142.5 102 67.6
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 4.0e-32 141.7 106 63.2
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 6.9e-32 141.0 138 54.3
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 6.9e-32 141.0 105 66.7
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 9.0e-32 140.6 108 65.7
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 1.5e-31 139.8 109 65.1
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 2.0e-31 139.4 139 52.5
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 2.0e-31 139.4 127 59.1
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 2.6e-31 139.0 141 51.8
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 2.6e-31 139.0 100 67.0
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 2.6e-31 139.0 103 62.1
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 3.4e-31 138.7 91 70.3
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 5.8e-31 137.9 104 65.4
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 5.8e-31 137.9 100 66.0
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 7.6e-31 137.5 120 60.0
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 1.0e-30 137.1 90 72.2
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 1.3e-30 136.7 104 65.4
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 1.7e-30 136.3 136 57.4
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 2.2e-30 136.0 91 70.3
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 2.2e-30 136.0 140 55.0
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 3.8e-30 135.2 144 56.2
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 8.4e-30 134.0 137 55.5
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 8.4e-30 134.0 91 70.3
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 1.4e-29 133.3 137 55.5
Ca_19909_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.9e-29 132.9 101 61.4
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 2.5e-29 132.5 137 54.7
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 2.5e-29 132.5 97 66.0
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 3.2e-29 132.1 90 68.9
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 5.5e-29 131.3 139 54.0
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 7.1e-29 131.0 138 53.6
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 7.1e-29 131.0 136 52.2
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 1.2e-28 130.2 141 53.2
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 1.6e-28 129.8 137 51.8
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 3.5e-28 128.6 83 72.3
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 3.5e-28 128.6 83 72.3
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 4.6e-28 128.3 135 54.1
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 4.6e-28 128.3 136 55.1
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 6.0e-28 127.9 107 60.7
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 1.0e-27 127.1 138 50.7
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 2.3e-27 125.9 136 52.9
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 1.5e-26 123.2 134 53.7
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 1.9e-26 122.9 91 65.9
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 3.3e-26 122.1 99 61.6
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 1.3e-25 120.2 120 51.7
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 2.8e-25 119.0 89 59.6
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 2.8e-25 119.0 91 59.3
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 3.7e-25 118.6 101 54.5
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 4.8e-25 118.2 135 48.9
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 4.8e-25 118.2 72 73.6
MELO3C034959.2 Cucumis melo HOM05D006036 ORTHO05D007736 2.6e-23 112.5 82 64.6
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 3.4e-23 112.1 71 74.6
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 5.0e-22 108.2 140 46.4
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.9e-21 106.3 68 72.1
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 1.9e-21 106.3 93 54.8
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 2.5e-21 105.9 71 67.6
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 6.1e-20 101.3 70 61.4
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 5.1e-19 98.2 70 67.1
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 1.5e-15 86.7 94 47.9
Psat3g116040 Pisum sativum HOM05D006036 ORTHO05D007736 1.5e-15 86.7 62 62.9
arahy.Tifrunner.gnm1.ann1.WD24C8 Arachis hypogaea HOM05D006036 ORTHO05D007736 4.2e-13 78.6 84 51.2
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 5.5e-13 78.2 87 44.8
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 5.5e-13 78.2 104 45.2
arahy.Tifrunner.gnm1.ann1.BW32E7 Arachis hypogaea HOM05D006036 ORTHO05D000587 9.7e-10 67.4 59 55.9
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 5.3e-08 61.6 166 30.7
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 1.5e-07 60.1 140 33.6
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 2.6e-07 59.3 60 55.0


User provided reference genes

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