Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 3.0e-130 468.8 279 100.0
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 6.9e-71 271.6 314 57.3
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 7.7e-62 241.5 248 58.1
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 5.7e-57 225.3 253 51.4
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 4.8e-56 222.2 267 55.1
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 4.5e-54 215.7 243 53.5
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 2.2e-53 213.4 255 54.5
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 2.2e-53 213.4 251 50.2
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 6.5e-53 211.8 275 46.2
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 1.5e-52 210.7 242 51.7
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 1.6e-51 207.2 250 48.0
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 3.6e-51 206.1 247 46.6
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 1.0e-50 204.5 263 47.1
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 1.5e-49 200.7 298 45.0
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 2.0e-49 200.3 276 44.9
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 5.4e-47 192.2 247 47.4
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 1.6e-46 190.7 262 49.2
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 4.5e-46 189.1 263 48.7
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 7.7e-46 188.3 269 43.9
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.0e-45 188.0 244 47.1
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 2.3e-45 186.8 260 48.8
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 3.8e-45 186.0 247 47.4
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 5.0e-45 185.7 271 43.5
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 8.6e-45 184.9 244 48.0
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 1.5e-44 184.1 283 43.8
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 1.9e-44 183.7 256 49.6
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 1.9e-44 183.7 259 45.9
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 2.5e-44 183.3 257 46.3
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 3.2e-44 183.0 244 46.7
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 3.2e-44 183.0 260 45.4
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 1.4e-42 177.6 259 50.2
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 1.2e-41 174.5 262 45.4
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 1.5e-41 174.1 236 46.2
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 4.4e-41 172.6 259 48.3
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 4.4e-41 172.6 262 46.6
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 5.7e-41 172.2 263 42.6
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 5.7e-41 172.2 241 46.9
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 1.7e-40 170.6 251 48.2
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 6.3e-40 168.7 260 42.7
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 8.3e-40 168.3 257 46.7
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.4e-39 166.8 250 48.0
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 4.1e-39 166.0 197 46.7
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 5.4e-39 165.6 244 50.0
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 7.0e-39 165.2 242 48.8
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 1.2e-38 164.5 202 46.0
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 1.6e-38 164.1 269 40.5
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 2.7e-38 163.3 256 46.9
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 2.7e-38 163.3 250 46.4
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 4.5e-38 162.5 280 38.6
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 1.3e-37 161.0 249 42.6
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 1.7e-37 160.6 259 46.7
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 1.7e-37 160.6 233 44.2
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 2.3e-37 160.2 264 45.8
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 2.9e-37 159.8 262 45.0
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 3.8e-37 159.5 257 46.7
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 5.0e-37 159.1 267 45.3
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.1e-36 157.9 250 47.2
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 1.9e-36 157.1 286 39.5
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 1.9e-36 157.1 256 39.5
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 2.5e-36 156.8 247 47.4
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 5.6e-36 155.6 268 39.2
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 7.3e-36 155.2 277 42.2
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 7.3e-36 155.2 258 44.6
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 7.3e-36 155.2 236 45.8
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.2e-35 154.5 235 47.7
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.6e-35 154.1 257 39.3
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 2.1e-35 153.7 262 44.7
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 2.1e-35 153.7 230 46.1
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 2.8e-35 153.3 278 43.2
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 6.1e-35 152.1 264 42.0
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 8.0e-35 151.8 275 37.5
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 5.2e-34 149.1 254 45.7
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 1.5e-33 147.5 279 38.4
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 4.4e-33 146.0 247 43.3
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.4e-33 146.0 252 45.2
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 7.5e-33 145.2 151 49.7
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 9.8e-33 144.8 243 45.3
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.2e-32 143.7 305 39.7
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 4.9e-32 142.5 272 41.5
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 8.3e-32 141.7 235 42.6
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 1.1e-31 141.4 273 35.9
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.1e-31 139.4 347 32.0
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 1.6e-30 137.5 228 44.7
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 1.6e-30 137.5 272 38.2
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 2.0e-30 137.1 159 47.2
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 4.6e-30 136.0 239 44.8
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 7.8e-30 135.2 263 39.2
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 1.7e-29 134.0 165 45.5
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 6.6e-29 132.1 249 35.7
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 5.6e-28 129.0 161 45.3
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 2.1e-27 127.1 229 38.4
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 8.0e-27 125.2 243 41.2
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 4.4e-25 119.4 232 42.2
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 7.5e-25 118.6 232 41.4
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 7.5e-25 118.6 232 41.4
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 4.9e-24 115.9 73 65.8
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 1.1e-23 114.8 129 50.4
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 1.9e-23 114.0 233 42.1
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 1.9e-23 114.0 233 42.1
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 7.3e-20 102.1 199 37.7
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 8.1e-19 98.6 59 69.5
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 4.1e-15 86.3 301 26.6
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 7.8e-14 82.0 86 40.7
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 1.5e-12 77.8 58 55.2
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 8.1e-11 72.0 138 32.6
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 1.7e-08 64.3 134 30.6
AT4G00140 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 6.4e-08 62.4 43 62.8
Zm00001eb427420 Zea mays HOM05D007090 ORTHO05D008993 1.4e-07 61.2 185 40.5
Lj7P535T24 Lonicera japonica HOM05D007090 ORTHO05D008993 7.8e-06 55.5 48 56.2


User provided reference genes

Program Settings