Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 4.8e-129 464.5 240 100.0
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 2.1e-92 342.8 237 75.9
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.0e-86 323.9 238 73.5
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 6.8e-83 311.2 239 68.2
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 1.9e-77 293.1 234 63.7
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 5.6e-77 291.6 184 77.2
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 7.3e-77 291.2 186 75.3
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 9.5e-77 290.8 186 76.3
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 6.2e-76 288.1 184 76.1
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 1.8e-75 286.6 229 65.5
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 6.8e-75 284.6 185 73.5
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 1.5e-74 283.5 232 62.9
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 2.0e-74 283.1 191 73.3
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 2.6e-74 282.7 181 77.3
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 5.8e-74 281.6 186 72.6
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 7.5e-74 281.2 184 72.3
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 7.5e-74 281.2 184 75.0
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 1.3e-73 280.4 184 75.0
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 3.7e-73 278.9 220 64.1
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.7e-73 278.9 187 72.2
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 4.9e-73 278.5 224 63.8
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 6.4e-73 278.1 235 62.6
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 8.3e-73 277.7 217 65.9
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 1.1e-72 277.3 187 71.1
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.4e-72 276.9 187 71.7
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 1.4e-72 276.9 186 70.4
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.4e-72 276.2 187 71.7
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 3.2e-72 275.8 190 73.2
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 3.2e-72 275.8 179 75.4
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 5.4e-72 275.0 193 72.5
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 7.1e-72 274.6 179 75.4
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 9.2e-72 274.2 187 71.1
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 1.6e-71 273.5 230 62.2
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 2.1e-71 273.1 231 62.3
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 2.1e-71 273.1 196 69.9
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 3.5e-71 272.3 220 66.4
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 6.0e-71 271.6 191 68.6
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 1.0e-70 270.8 186 72.6
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.0e-70 270.8 186 70.4
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 1.3e-70 270.4 186 71.0
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.7e-70 270.0 208 65.9
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 3.0e-70 269.2 186 68.3
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 3.9e-70 268.9 177 76.8
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 5.1e-70 268.5 189 70.4
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 5.1e-70 268.5 212 66.5
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 6.6e-70 268.1 222 65.3
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 1.1e-69 267.3 186 71.0
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 1.5e-69 266.9 179 70.9
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 1.5e-69 266.9 225 61.8
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 2.5e-69 266.2 228 62.7
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 7.3e-69 264.6 187 69.5
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 1.6e-68 263.5 216 63.9
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 2.1e-68 263.1 227 60.4
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 2.1e-68 263.1 201 69.7
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 3.6e-68 262.3 184 69.6
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 8.1e-68 261.2 181 71.8
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 1.1e-67 260.8 184 68.5
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 1.1e-67 260.8 191 71.7
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 1.4e-67 260.4 194 66.5
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 1.4e-67 260.4 178 73.6
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 1.8e-67 260.0 228 61.8
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 4.0e-67 258.8 194 67.0
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 5.2e-67 258.5 194 65.5
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 6.8e-67 258.1 226 62.8
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 6.8e-67 258.1 226 62.4
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 6.8e-67 258.1 228 61.8
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 1.2e-66 257.3 246 56.5
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 3.4e-66 255.8 193 67.4
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 5.8e-66 255.0 202 66.3
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 1.3e-65 253.8 186 66.7
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 2.2e-65 253.1 226 57.1
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 2.9e-65 252.7 219 59.8
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 8.4e-65 251.1 226 57.1
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 8.4e-65 251.1 208 63.9
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 1.1e-64 250.8 203 61.1
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.4e-64 250.4 223 61.4
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 1.9e-64 250.0 226 56.6
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 2.4e-64 249.6 185 69.2
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 2.7e-63 246.1 226 56.6
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 2.7e-63 246.1 186 65.1
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 6.2e-60 235.0 173 68.2
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 8.1e-60 234.6 204 59.8
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 5.2e-59 231.9 275 48.7
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 6.9e-59 231.5 173 67.1
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 7.8e-55 218.0 183 66.1
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 4.3e-53 212.2 212 54.2
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 3.6e-52 209.1 124 84.7
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 4.8e-52 208.8 124 79.0
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.0e-50 203.4 190 59.5
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.0e-50 203.4 190 59.5
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 2.0e-50 203.4 186 59.7
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 3.8e-49 199.1 175 59.4
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 1.4e-48 197.2 139 71.2
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 7.1e-48 194.9 124 76.6
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 2.1e-47 193.4 166 59.0
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.8e-46 190.3 169 62.1
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 3.3e-45 186.0 119 76.5
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 4.3e-45 185.7 121 81.0
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 9.6e-45 184.5 124 72.6
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.3e-44 184.1 122 73.8
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 9.9e-42 174.5 157 62.4
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 3.0e-38 162.9 155 54.2
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.9e-38 162.5 147 61.9
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 2.8e-36 156.4 154 52.6
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.1e-35 154.5 158 50.0
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 9.0e-35 151.4 147 59.9
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 2.0e-34 150.2 130 60.0
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 8.4e-33 144.8 103 68.9
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.4e-32 144.1 98 73.5
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 2.4e-27 126.7 170 44.1
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 7.6e-26 121.7 90 65.6
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.8e-22 110.5 133 45.9
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 1.4e-16 90.9 107 45.8
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 9.4e-16 88.2 58 75.9
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 4.4e-13 79.3 46 76.1
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 6.3e-12 75.5 81 48.1
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 1.0e-09 68.2 88 46.6
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 3.8e-09 66.2 54 61.1
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 2.5e-08 63.5 46 60.9
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 3.2e-08 63.2 37 70.3
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 4.2e-08 62.8 45 57.8


User provided reference genes

Program Settings