Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 0.0e+00 1440.6 761 100.0
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 5.0e-180 635.6 872 48.2
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 1.4e-166 590.9 822 47.3
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 2.0e-160 570.5 822 47.8
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 1.2e-152 544.7 888 44.5
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 1.4e-134 484.6 892 41.1
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 4.0e-121 439.9 708 43.9
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 1.8e-108 397.9 598 44.3
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 4.5e-104 383.3 836 36.5
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 7.6e-104 382.5 763 37.5
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 2.2e-103 380.9 847 35.8
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 3.8e-103 380.2 854 35.8
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 8.4e-103 379.0 803 36.4
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 1.1e-102 378.6 838 36.0
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 3.4e-96 357.1 746 37.9
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.2e-95 354.4 784 36.1
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 2.2e-95 354.4 796 34.8
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 3.8e-95 353.6 578 41.0
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 6.5e-95 352.8 819 35.2
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 1.9e-94 351.3 813 36.2
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 4.2e-94 350.1 784 36.1
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 2.1e-93 347.8 494 44.5
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 3.9e-92 343.6 805 34.9
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 8.7e-92 342.4 814 35.1
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 1.1e-91 342.0 742 36.7
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 1.5e-91 341.7 851 35.5
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 7.4e-91 339.3 745 35.8
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 9.7e-91 339.0 802 33.7
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 9.7e-91 339.0 798 35.7
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.7e-90 337.0 788 36.3
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 1.4e-89 335.1 815 34.7
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 3.1e-89 334.0 757 35.7
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 9.0e-89 332.4 773 35.2
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 2.6e-88 330.9 846 34.5
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.0e-87 328.9 811 35.5
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 6.5e-87 326.2 776 35.7
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 1.1e-86 325.5 824 33.1
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.4e-86 325.1 796 34.9
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 2.5e-86 324.3 515 41.7
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 5.5e-86 323.2 557 39.0
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 9.4e-86 322.4 812 33.0
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 1.2e-85 322.0 805 33.2
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 7.9e-85 319.3 784 35.1
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 8.8e-84 315.8 542 40.0
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 1.1e-83 315.5 783 33.5
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 3.7e-82 310.5 838 33.2
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 4.8e-82 310.1 509 41.5
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 6.3e-82 309.7 510 38.8
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 1.8e-81 308.1 794 34.0
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 5.3e-81 306.6 535 40.0
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 3.4e-80 303.9 789 34.1
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 1.0e-79 302.4 608 38.5
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 8.5e-79 299.3 517 39.7
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.2e-77 295.4 771 32.9
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 6.1e-77 293.1 733 34.7
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 2.3e-76 291.2 811 33.5
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 2.0e-75 288.1 905 32.3
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 1.3e-74 285.4 849 31.4
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 7.0e-73 279.6 957 29.7
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 1.3e-71 275.4 610 34.9
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 1.7e-71 275.0 567 36.2
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 6.5e-71 273.1 266 54.1
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 1.5e-70 271.9 768 33.6
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 3.2e-70 270.8 779 31.1
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 7.2e-70 269.6 785 32.0
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 1.2e-69 268.9 806 30.0
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 2.1e-69 268.1 781 31.2
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 1.0e-68 265.8 801 30.7
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.0e-68 265.8 762 31.1
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.1e-67 262.3 775 31.2
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 2.6e-67 261.2 806 31.3
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 5.7e-67 260.0 748 33.3
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 5.7e-67 260.0 748 33.3
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 1.7e-66 258.5 822 31.3
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 4.8e-66 256.9 788 31.0
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 1.1e-65 255.8 776 30.3
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 2.4e-65 254.6 829 30.4
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 5.9e-64 250.0 812 30.5
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 6.5e-63 246.5 825 31.2
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 1.1e-62 245.7 864 28.6
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 1.5e-62 245.4 799 30.4
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 3.2e-62 244.2 518 36.5
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 5.5e-62 243.4 824 31.1
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 8.0e-61 239.6 567 33.9
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 4.0e-60 237.3 776 30.9
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 8.8e-60 236.1 569 34.8
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 8.8e-60 236.1 863 28.6
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 5.7e-59 233.4 785 32.0
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 5.7e-59 233.4 745 30.7
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 1.8e-57 228.4 518 35.5
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 2.4e-57 228.0 739 32.1
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 4.1e-57 227.3 810 29.4
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 1.6e-56 225.3 826 29.3
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 2.0e-56 224.9 632 33.4
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 7.7e-56 223.0 727 31.2
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 7.7e-56 223.0 701 30.8
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 1.0e-47 196.1 797 26.7
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 2.0e-43 181.8 609 31.7
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 3.4e-43 181.0 640 29.1
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 7.5e-43 179.9 620 30.3
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 9.8e-43 179.5 580 30.3
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 2.2e-42 178.3 577 30.7
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 2.9e-42 177.9 614 31.3
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 4.6e-40 170.6 658 27.8
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 1.0e-39 169.5 522 31.2
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.7e-39 168.7 607 29.0
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 7.3e-30 136.7 152 48.7
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 6.6e-15 87.0 118 40.7
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 4.0e-12 77.8 215 32.6
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 4.2e-09 67.8 100 39.0
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 4.2e-09 67.8 100 39.0
Mapoly0003s0122 Marchantia polymorpha HOM05D020720 ORTHO05D007477 2.7e-08 65.1 149 32.2
Pp3c5_15230 Physcomitrium patens HOM05D001393 ORTHO05D007477 3.0e-07 61.6 204 28.9
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 5.1e-07 60.8 119 31.9
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 1.9e-06 58.9 210 27.6


User provided reference genes

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