Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 1.9e-62 242.3 117 100.0
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 2.1e-45 185.7 98 88.8
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 1.8e-44 182.6 98 85.7
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 2.3e-44 182.2 111 78.4
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 3.0e-44 181.8 98 84.7
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 5.2e-44 181.0 100 85.0
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 5.2e-44 181.0 100 85.0
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 5.2e-44 181.0 98 85.7
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 1.5e-43 179.5 98 84.7
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 1.5e-43 179.5 98 84.7
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 7.5e-43 177.2 98 83.7
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 9.8e-43 176.8 98 84.7
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 3.7e-42 174.9 100 86.0
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 2.4e-41 172.2 100 82.0
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 2.4e-41 172.2 100 82.0
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 9.1e-41 170.2 100 76.0
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 1.6e-40 169.5 98 80.6
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.6e-40 169.5 98 81.6
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 1.6e-40 169.5 100 80.0
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 1.6e-40 169.5 100 80.0
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 1.6e-40 169.5 98 79.6
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 2.0e-40 169.1 98 81.6
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 2.7e-40 168.7 102 76.5
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 2.7e-40 168.7 98 81.6
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 2.7e-40 168.7 98 80.6
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 3.5e-40 168.3 98 81.6
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 3.5e-40 168.3 98 79.6
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 3.5e-40 168.3 100 78.0
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 4.5e-40 167.9 98 77.6
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 4.5e-40 167.9 98 80.6
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 4.5e-40 167.9 98 80.6
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 4.5e-40 167.9 98 80.6
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 4.5e-40 167.9 115 71.3
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 4.5e-40 167.9 98 81.6
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 5.9e-40 167.5 98 80.6
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 5.9e-40 167.5 98 80.6
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 7.7e-40 167.2 98 81.6
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 1.0e-39 166.8 98 80.6
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 1.3e-39 166.4 98 81.6
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 1.7e-39 166.0 98 80.6
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 2.9e-39 165.2 97 78.4
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 2.9e-39 165.2 98 77.6
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 2.9e-39 165.2 98 77.6
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 3.8e-39 164.9 98 78.6
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 5.0e-39 164.5 98 77.6
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 6.6e-39 164.1 98 78.6
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 6.6e-39 164.1 98 79.6
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 8.6e-39 163.7 98 78.6
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 8.6e-39 163.7 98 76.5
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 1.1e-38 163.3 98 74.5
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 1.1e-38 163.3 98 79.6
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 1.5e-38 162.9 98 75.5
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 1.5e-38 162.9 98 77.6
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 2.5e-38 162.2 98 78.6
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 2.5e-38 162.2 98 75.5
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 3.3e-38 161.8 98 75.5
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 3.3e-38 161.8 101 78.2
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 5.5e-38 161.0 98 76.5
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 5.5e-38 161.0 99 76.8
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 9.5e-38 160.2 101 78.2
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 1.2e-37 159.8 100 76.0
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 1.2e-37 159.8 98 76.5
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 1.6e-37 159.5 98 73.5
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 1.6e-37 159.5 98 76.5
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 2.1e-37 159.1 100 75.0
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 3.6e-37 158.3 98 76.5
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 4.7e-37 157.9 93 79.6
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 1.0e-36 156.8 98 76.5
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 1.4e-36 156.4 98 75.5
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 4.0e-36 154.8 98 76.5
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 4.0e-36 154.8 98 74.5
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 5.2e-36 154.5 100 75.0
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 6.8e-36 154.1 98 72.4
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 6.8e-36 154.1 98 72.4
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 6.8e-36 154.1 98 72.4
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 6.8e-36 154.1 98 72.4
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 6.8e-36 154.1 101 75.2
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 1.2e-35 153.3 98 72.4
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 1.5e-35 152.9 98 71.4
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 2.0e-35 152.5 98 71.4
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 2.6e-35 152.1 98 71.4
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 2.6e-35 152.1 98 72.4
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 2.6e-35 152.1 98 71.4
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 3.4e-35 151.8 98 72.4
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 5.7e-35 151.0 126 61.1
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 5.7e-35 151.0 98 73.5
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 9.8e-35 150.2 98 70.4
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 9.8e-35 150.2 152 54.6
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 3.7e-34 148.3 98 72.4
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 3.7e-34 148.3 98 71.4
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 8.3e-34 147.1 98 68.4
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 2.4e-33 145.6 97 68.0
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 7.0e-33 144.1 112 64.3
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 7.8e-32 140.6 129 55.0
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 1.1e-30 136.7 87 73.6
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 1.1e-30 136.7 81 76.5
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 1.5e-30 136.3 88 75.0
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 2.8e-29 132.1 79 78.5
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 4.7e-29 131.3 146 48.6
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 1.0e-28 130.2 98 61.2
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 1.0e-28 130.2 83 74.7
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 3.4e-27 125.2 103 58.3
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 1.3e-26 123.2 99 58.6
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 5.4e-25 117.9 107 60.7
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 5.4e-25 117.9 107 60.7
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 8.9e-20 100.5 107 46.7
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 1.0e-15 87.0 63 68.3
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 1.4e-09 66.6 32 93.8


User provided reference genes

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