Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 2.6e-75 285.4 154 100.0
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 3.7e-34 148.7 145 56.6
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 3.5e-32 142.1 141 58.2
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 5.6e-30 134.8 134 61.9
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 6.2e-29 131.3 152 56.6
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 8.1e-29 131.0 129 58.9
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 5.2e-28 128.3 115 59.1
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 5.2e-28 128.3 153 54.2
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 1.5e-27 126.7 145 54.5
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 1.5e-27 126.7 140 50.7
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 2.0e-27 126.3 108 61.1
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 7.6e-27 124.4 150 50.7
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 7.6e-27 124.4 153 52.9
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 2.2e-26 122.9 107 59.8
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 3.8e-26 122.1 140 54.3
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 1.4e-25 120.2 142 50.0
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 1.9e-25 119.8 108 57.4
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 2.4e-25 119.4 153 43.8
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 4.2e-25 118.6 138 52.9
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 7.1e-25 117.9 109 61.5
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 9.3e-25 117.5 103 59.2
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 2.1e-24 116.3 109 60.6
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 2.1e-24 116.3 106 51.9
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 2.7e-24 115.9 108 58.3
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 7.8e-24 114.4 145 51.7
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 1.0e-23 114.0 125 50.4
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 3.9e-23 112.1 137 48.2
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 5.1e-23 111.7 106 55.7
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 5.1e-23 111.7 135 49.6
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 5.1e-23 111.7 109 59.6
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 6.6e-23 111.3 150 46.0
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 8.7e-23 110.9 140 47.9
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 1.1e-22 110.5 109 58.7
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 1.5e-22 110.2 109 58.7
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 2.5e-22 109.4 154 46.8
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 3.3e-22 109.0 113 54.0
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 4.3e-22 108.6 143 44.8
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 7.3e-22 107.8 108 57.4
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 7.3e-22 107.8 136 44.9
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 7.3e-22 107.8 108 54.6
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 1.3e-21 107.1 142 47.9
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 1.3e-21 107.1 83 62.7
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 1.6e-21 106.7 97 56.7
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 2.8e-21 105.9 108 54.6
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 2.8e-21 105.9 145 50.3
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 1.1e-20 104.0 125 48.8
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 1.1e-20 104.0 144 47.9
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.1e-20 104.0 106 52.8
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 1.1e-20 104.0 108 51.9
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 1.4e-20 103.6 137 46.7
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 1.8e-20 103.2 104 54.8
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 2.4e-20 102.8 104 54.8
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 2.4e-20 102.8 137 48.9
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 2.4e-20 102.8 108 50.0
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 3.1e-20 102.4 137 47.4
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 4.0e-20 102.1 105 52.4
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 5.3e-20 101.7 77 62.3
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 5.3e-20 101.7 107 53.3
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 6.9e-20 101.3 137 46.7
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 1.2e-19 100.5 137 46.0
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 1.2e-19 100.5 141 48.2
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 1.2e-19 100.5 106 51.9
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.0e-19 99.8 106 51.9
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.0e-19 99.8 106 51.9
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 2.6e-19 99.4 106 51.9
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.6e-19 99.4 106 51.9
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.6e-19 99.4 106 51.9
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 2.6e-19 99.4 78 65.4
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 3.4e-19 99.0 82 61.0
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 3.4e-19 99.0 135 43.7
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 9.9e-19 97.4 103 51.5
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 9.9e-19 97.4 133 47.4
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 1.3e-18 97.1 107 50.5
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 1.7e-18 96.7 105 52.4
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 1.7e-18 96.7 68 66.2
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 1.7e-18 96.7 76 64.5
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 1.7e-18 96.7 80 58.8
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 2.9e-18 95.9 107 50.5
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 2.9e-18 95.9 144 45.8
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 6.4e-18 94.7 141 42.6
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 8.4e-18 94.4 67 65.7
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 8.4e-18 94.4 107 48.6
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 8.4e-18 94.4 107 47.7
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 1.1e-17 94.0 69 63.8
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 1.4e-17 93.6 138 47.1
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 2.4e-17 92.8 143 46.9
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.2e-17 92.0 116 46.6
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 5.4e-17 91.7 143 46.2
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 7.1e-17 91.3 105 50.5
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 1.2e-16 90.5 155 40.0
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 2.7e-16 89.4 142 44.4
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 3.5e-16 89.0 69 60.9
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 6.0e-16 88.2 107 50.5
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 1.7e-15 86.7 97 46.4
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 2.3e-15 86.3 70 57.1
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 3.0e-15 85.9 142 41.5
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 1.1e-14 84.0 145 38.6
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 1.5e-14 83.6 106 43.4
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 3.3e-14 82.4 107 44.9
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 3.3e-14 82.4 67 58.2
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 4.3e-14 82.0 102 47.1
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 7.3e-14 81.3 121 44.6
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 9.6e-14 80.9 164 36.0
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 6.2e-13 78.2 105 46.7
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 6.2e-13 78.2 105 49.5
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 1.8e-12 76.6 125 41.6
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 4.0e-12 75.5 143 40.6
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 1.2e-11 73.9 86 47.7
HPP92_020257 Vanilla planifolia HOM05D006684 ORTHO05D008443 8.4e-10 67.8 82 51.2
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 1.9e-09 66.6 67 52.2
Ah.07g198740 Amaranthus hybridus HOM05D006684 ORTHO05D008443 2.7e-08 62.8 103 40.8
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 4.6e-08 62.0 94 42.6
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis HOM05D006684 ORTHO05D008443 6.0e-08 61.6 78 42.3
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 5.1e-07 58.5 164 34.1
Hma1.2p1_0053F.1_g030890 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 6.7e-07 58.2 105 38.1


User provided reference genes

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