Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01474 Erythranthe guttata HOM05D007026 ORTHO05D008493 1.3e-144 516.5 284 100.0
MSTRG.28077 Avicennia marina HOM05D007026 ORTHO05D008493 1.1e-84 317.4 304 62.2
SGA_v2.0_scaffold4G02258 Striga asiatica HOM05D007026 ORTHO05D008493 1.2e-75 287.3 285 60.7
Migut.A00762 Erythranthe guttata HOM05D007026 ORTHO05D008493 2.3e-69 266.5 142 99.3
Hma1.2p1_0293F.1_g116330 Hydrangea macrophylla HOM05D007026 ORTHO05D008493 1.3e-59 234.2 298 50.7
Cc02_g27730 Coffea canephora HOM05D007026 ORTHO05D008493 9.0e-58 228.0 201 65.2
DCAR_029660 Daucus carota HOM05D007026 ORTHO05D008493 7.1e-55 218.4 142 77.5
unitig_0.g1578 Utricularia gibba HOM05D007026 ORTHO05D008493 9.3e-55 218.0 173 67.6
Thecc.01G412700 Theobroma cacao HOM05D007026 ORTHO05D008493 6.0e-54 215.3 136 79.4
Rhsim01G0130400 Rhododendron simsii HOM05D007026 ORTHO05D008493 1.0e-53 214.5 219 57.5
vmacro21182 Vaccinium macrocarpon HOM05D007026 ORTHO05D008493 3.0e-53 213.0 294 48.0
QL04p005492 Quercus lobata HOM05D007026 ORTHO05D008493 8.7e-53 211.5 291 47.4
TWI09G0295 Tripterygium wilfordii HOM05D007026 ORTHO05D008493 8.7e-53 211.5 324 45.1
CSS0028033 Camellia sinensis var. sinensis HOM05D007026 ORTHO05D008493 2.5e-52 209.9 141 76.6
MD07G1007900 Malus domestica HOM05D007026 ORTHO05D008493 1.3e-51 207.6 142 74.6
Prupe.2G010600 Prunus persica HOM05D007026 ORTHO05D008493 1.6e-51 207.2 321 45.8
Lj3g0000564 Lotus japonicus HOM05D007026 ORTHO05D008493 2.1e-51 206.8 193 65.3
Cpa.g.sc245.8 Carica papaya HOM05D007026 ORTHO05D008493 2.8e-51 206.5 142 75.4
Potri.009G063700 Populus trichocarpa HOM05D007026 ORTHO05D008493 2.8e-51 206.5 293 48.1
Nitab4.5_0002881g0080 Nicotiana tabacum HOM05D007026 ORTHO05D008493 3.6e-51 206.1 291 46.7
Nn2g15423 Nelumbo nucifera HOM05D007026 ORTHO05D008493 4.8e-51 205.7 226 52.2
Cfa010744 Carpinus fangiana HOM05D007026 ORTHO05D008493 6.2e-51 205.3 213 55.4
MD02G1314200 Malus domestica HOM05D007026 ORTHO05D008493 6.2e-51 205.3 142 73.9
Psat4g148320 Pisum sativum HOM05D007026 ORTHO05D008493 1.1e-50 204.5 230 54.3
CsaV3_7G031200 Cucumis sativus L. HOM05D007026 ORTHO05D008493 1.4e-50 204.1 293 45.4
PGR044G0728 Punica granatum HOM05D007026 ORTHO05D008493 1.4e-50 204.1 142 73.2
Sabra09G0047000 Salix brachista HOM05D007026 ORTHO05D008493 1.4e-50 204.1 175 64.0
PGSC0003DMG400024551 Solanum tuberosum HOM05D007026 ORTHO05D008493 4.0e-50 202.6 170 64.7
Sopen03g034460 Solanum pennellii HOM05D007026 ORTHO05D008493 5.3e-50 202.2 168 63.1
TAR623G0027 Trochodendron aralioides HOM05D007026 ORTHO05D008493 6.9e-50 201.8 294 46.6
Peaxi162Scf00428g00077 Petunia axillaris HOM05D007026 ORTHO05D008493 1.2e-49 201.1 213 54.0
Lalb_Chr03g0033971 Lupinus albus HOM05D007026 ORTHO05D008493 2.0e-49 200.3 135 74.8
Lsat_1_v5_gn_1_108360 Lactuca sativa HOM05D007026 ORTHO05D008493 2.6e-49 199.9 287 48.4
Medtr8g036520 Medicago truncatula HOM05D007026 ORTHO05D008493 2.6e-49 199.9 142 71.8
MELO3C023538.2 Cucumis melo HOM05D007026 ORTHO05D008493 3.4e-49 199.5 296 45.3
RcHm_v2.0_Chr1g0315651 Rosa chinensis HOM05D007026 ORTHO05D008493 3.4e-49 199.5 176 63.6
Solyc03g115460.3 Solanum lycopersicum HOM05D007026 ORTHO05D008493 3.4e-49 199.5 258 47.7
arahy.Tifrunner.gnm1.ann1.VL74DI Arachis hypogaea HOM05D007026 ORTHO05D008493 5.8e-49 198.7 209 55.0
ClCG09G004280 Citrullus lanatus HOM05D007026 ORTHO05D008493 5.8e-49 198.7 296 45.6
TAR623G1735 Trochodendron aralioides HOM05D007026 ORTHO05D008493 5.8e-49 198.7 293 47.1
Atru.chr11.2644 Acer truncatum HOM05D007026 ORTHO05D008493 1.3e-48 197.6 301 44.9
Gorai.004G173800 Gossypium raimondii HOM05D007026 ORTHO05D008493 1.3e-48 197.6 269 49.4
Manes.10G145400 Manihot esculenta HOM05D007026 ORTHO05D008493 1.3e-48 197.6 167 61.7
Gohir.D08G166400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 1.7e-48 197.2 270 49.6
Actinidia21558 Actinidia chinensis HOM05D007026 ORTHO05D008493 3.8e-48 196.1 135 73.3
Duzib268G1513 Durio zibethinus HOM05D007026 ORTHO05D008493 3.8e-48 196.1 136 72.8
THA.LOC104826673 Tarenaya hassleriana HOM05D007026 ORTHO05D008493 6.4e-48 195.3 226 50.4
ECA248G3415 Erigeron canadensis HOM05D007026 ORTHO05D008493 1.4e-47 194.1 290 47.6
FAN03G2284 Fragaria x ananassa HOM05D007026 ORTHO05D008493 1.4e-47 194.1 302 42.7
FAN06G1399 Fragaria x ananassa HOM05D007026 ORTHO05D008493 2.4e-47 193.4 304 44.7
Sc11g0009270 Simmondsia chinensis HOM05D007026 ORTHO05D008493 4.2e-47 192.6 204 51.5
CANSAT80G1756 Cannabis sativa HOM05D007026 ORTHO05D008493 5.5e-47 192.2 212 51.4
Potri.001G269000 Populus trichocarpa HOM05D007026 ORTHO05D008493 1.2e-46 191.0 289 46.0
FAN10G3680 Fragaria x ananassa HOM05D007026 ORTHO05D008493 3.5e-46 189.5 304 44.4
Ciclev10032288m.g Citrus clementina HOM05D007026 ORTHO05D008493 4.6e-46 189.1 312 43.9
Haze_03229 Corylus avellana HOM05D007026 ORTHO05D008493 6.0e-46 188.7 159 64.2
Glyma.13G204000 Glycine max HOM05D007026 ORTHO05D008493 6.0e-46 188.7 210 56.2
Lj7P569T60 Lonicera japonica HOM05D007026 ORTHO05D008493 7.9e-46 188.3 142 65.5
HanXRQChr06g0185391 Helianthus annuus HOM05D007026 ORTHO05D008493 5.1e-45 185.7 229 49.8
Phvul.011G212500 Phaseolus vulgaris HOM05D007026 ORTHO05D008493 4.8e-43 179.1 211 51.2
Sed0012425 Sechium edule HOM05D007026 ORTHO05D008493 4.8e-43 179.1 142 67.6
VMungo1127G0427 Vigna mungo HOM05D007026 ORTHO05D008493 8.1e-43 178.3 134 68.7
Dinv43456 Davidia involucrata HOM05D007026 ORTHO05D008493 1.2e-41 174.5 254 46.1
Aqoxy1G00217 Aquilegia oxysepala HOM05D007026 ORTHO05D008493 5.8e-41 172.2 199 49.7
PSO339G4493 Papaver somniferum HOM05D007026 ORTHO05D008493 1.0e-40 171.4 304 39.5
SHI26926 Sapria himalayana HOM05D007026 ORTHO05D008493 4.9e-40 169.1 187 52.4
BcaC01g04025 Brassica carinata HOM05D007026 ORTHO05D008493 8.4e-40 168.3 137 64.2
C03p45790 Brassica napus HOM05D007026 ORTHO05D008493 8.4e-40 168.3 137 64.2
BolC3t16854H Brassica oleracea HOM05D007026 ORTHO05D008493 8.4e-40 168.3 137 64.2
Carub.0003s1200 Capsella rubella HOM05D007026 ORTHO05D008493 1.4e-39 167.5 137 64.2
AT3G12650 Arabidopsis thaliana HOM05D007026 ORTHO05D008493 3.2e-39 166.4 137 65.0
Nitab4.5_0005198g0030 Nicotiana tabacum HOM05D007026 ORTHO05D008493 3.2e-39 166.4 139 63.3
AL3G24320 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 4.2e-39 166.0 137 64.2
RcHm_v2.0_Chr1g0315191 Rosa chinensis HOM05D007026 ORTHO05D008493 5.5e-39 165.6 117 71.8
Sp3g10790 Schrenkiella parvula HOM05D007026 ORTHO05D008493 9.3e-39 164.9 137 64.2
CARHR087160 Cardamine hirsuta HOM05D007026 ORTHO05D008493 1.2e-38 164.5 137 63.5
Thhalv10021417m.g Eutrema salsugineum HOM05D007026 ORTHO05D008493 1.2e-38 164.5 164 57.9
RcHm_v2.0_Chr1g0315371 Rosa chinensis HOM05D007026 ORTHO05D008493 1.6e-38 164.1 117 70.9
BcaB04g18713 Brassica carinata HOM05D007026 ORTHO05D008493 2.7e-38 163.3 137 62.8
A03p37740 Brassica napus HOM05D007026 ORTHO05D008493 4.6e-38 162.5 137 62.0
BraA03t12929Z Brassica rapa HOM05D007026 ORTHO05D008493 4.6e-38 162.5 137 62.0
RcHm_v2.0_Chr1g0315521 Rosa chinensis HOM05D007026 ORTHO05D008493 4.6e-38 162.5 117 70.9
COL.COLO4_23920 Corchorus olitorius HOM05D007026 ORTHO05D008493 1.0e-37 161.4 138 60.1
MBI01_g27619_MAGBIO Magnolia biondii HOM05D007026 ORTHO05D008493 1.3e-37 161.0 129 62.0
ATR0605G064 Amborella trichopoda HOM05D007026 ORTHO05D008493 3.0e-37 159.8 138 60.9
Dinv09365 Davidia involucrata HOM05D007026 ORTHO05D008493 6.7e-37 158.7 257 43.2
A05p36850 Brassica napus HOM05D007026 ORTHO05D008493 8.7e-37 158.3 189 50.3
HPP92_022795 Vanilla planifolia HOM05D007026 ORTHO05D008493 8.7e-37 158.3 133 62.4
RcHm_v2.0_Chr1g0315011 Rosa chinensis HOM05D007026 ORTHO05D008493 1.5e-36 157.5 117 70.1
BraA05t22486Z Brassica rapa HOM05D007026 ORTHO05D008493 5.7e-36 155.6 189 49.2
Aa31LG3G20 Aethionema arabicum HOM05D007026 ORTHO05D008493 9.6e-36 154.8 137 59.9
BcaB06g25527 Brassica carinata HOM05D007026 ORTHO05D008493 8.2e-35 151.8 138 59.4
Actinidia20675 Actinidia chinensis HOM05D007026 ORTHO05D008493 7.6e-33 145.2 153 52.9
Eucgr.J01262 Eucalyptus grandis HOM05D007026 ORTHO05D008493 6.5e-32 142.1 117 60.7
FvH4_7g00860 Fragaria vesca HOM05D007026 ORTHO05D008493 1.4e-31 141.0 259 42.1
Gohir.A08G145400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 4.2e-31 139.4 244 41.8
EL10Ac2g04312 Beta vulgaris HOM05D007026 ORTHO05D008493 9.3e-31 138.3 182 48.4
BcaC05g29251 Brassica carinata HOM05D007026 ORTHO05D008493 6.1e-30 135.6 122 60.7
PSO384G4663 Papaver somniferum HOM05D007026 ORTHO05D008493 2.3e-29 133.7 251 38.2
BolC5t34196H Brassica oleracea HOM05D007026 ORTHO05D008493 3.3e-28 129.8 113 61.9
Os02g0718000 Oryza sativa ssp. japonica HOM05D007026 ORTHO05D008493 6.5e-24 115.5 145 47.6
Zm00001eb189290 Zea mays HOM05D007026 ORTHO05D008493 6.5e-24 115.5 143 47.6
BcaB08g35591 Brassica carinata HOM05D007026 ORTHO05D008493 6.7e-21 105.5 138 50.0
AUR62009374 Chenopodium quinoa HOM05D007026 ORTHO05D008493 3.3e-20 103.2 118 44.1
Nitab4.5_0004511g0060 Nicotiana tabacum HOM05D007026 ORTHO05D008493 3.3e-20 103.2 68 75.0
TPR.G17515 Trifolium pratense HOM05D007026 ORTHO05D008493 8.5e-16 88.6 215 34.9
Nitab4.5_0000052g0150 Nicotiana tabacum HOM05D007026 ORTHO05D008493 4.2e-15 86.3 86 60.5
Pp3c2_10070 Physcomitrium patens HOM05D007026 ORTHO05D008493 7.2e-15 85.5 135 40.7
AL7G43500 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 6.7e-13 79.0 69 59.4
SMO147G0317 Selaginella moellendorffii HOM05D007026 ORTHO05D008493 7.4e-12 75.5 110 39.1
Aqoxy1G00218 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 1.8e-10 70.9 299 31.4
C05p55310 Brassica napus HOM05D007026 ORTHO05D008493 1.8e-10 70.9 49 75.5
Mapoly0153s0019 Marchantia polymorpha HOM05D007026 ORTHO05D008493 1.2e-09 68.2 132 37.1
TPR.G28471 Trifolium pratense HOM05D007026 ORTHO05D008493 1.1e-07 61.6 123 41.5


User provided reference genes

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