Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 6.2e-194 680.6 346 100.0
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 1.5e-136 490.0 360 71.7
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 1.4e-134 483.4 360 71.1
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 2.5e-134 482.6 357 69.7
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 3.0e-132 475.7 360 70.6
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 5.1e-132 474.9 360 70.3
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 1.9e-131 473.0 361 69.8
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 2.5e-131 472.6 357 68.3
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 3.3e-131 472.2 355 70.7
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 9.7e-131 470.7 351 70.4
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 1.7e-130 469.9 354 71.2
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 2.2e-130 469.5 356 70.5
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 4.8e-130 468.4 363 70.2
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 8.2e-130 467.6 355 69.3
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 8.2e-130 467.6 364 69.2
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 1.1e-129 467.2 355 69.3
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 1.8e-129 466.5 348 71.8
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 2.4e-129 466.1 337 73.3
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 2.4e-129 466.1 348 69.8
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 9.1e-129 464.2 358 70.4
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 1.5e-128 463.4 353 68.3
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 3.4e-128 462.2 360 69.4
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 4.5e-128 461.8 360 68.9
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 5.9e-128 461.5 351 70.1
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 7.7e-128 461.1 358 69.0
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 1.7e-127 459.9 357 70.0
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 1.7e-127 459.9 361 67.9
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 2.2e-127 459.5 358 69.0
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 5.0e-127 458.4 360 69.7
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 8.5e-127 457.6 370 66.5
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 1.1e-126 457.2 359 67.7
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 2.5e-126 456.1 355 69.6
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 2.5e-126 456.1 358 68.2
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 7.2e-126 454.5 358 69.0
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 7.2e-126 454.5 353 69.1
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 7.2e-126 454.5 357 68.3
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 9.4e-126 454.1 364 66.5
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.6e-125 453.4 360 68.1
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 1.6e-125 453.4 360 68.1
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.6e-125 453.4 381 63.3
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 1.6e-125 453.4 380 65.3
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 2.1e-125 453.0 360 68.1
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 3.6e-125 452.2 360 66.9
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 3.0e-124 449.1 359 67.4
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 3.0e-124 449.1 360 66.9
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 1.5e-123 446.8 352 64.5
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 2.6e-123 446.0 345 68.1
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 7.4e-123 444.5 424 59.4
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 2.2e-122 443.0 362 65.7
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 3.7e-122 442.2 362 64.6
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 4.8e-122 441.8 358 64.8
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 3.1e-121 439.1 358 64.8
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 1.2e-120 437.2 347 64.0
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 1.5e-120 436.8 344 66.9
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 3.4e-120 435.6 352 65.6
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 3.4e-120 435.6 354 61.0
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 4.5e-120 435.3 347 68.0
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 2.2e-119 433.0 364 65.7
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.1e-118 430.6 344 65.1
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 1.4e-118 430.3 350 66.9
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 2.5e-118 429.5 346 65.0
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 4.2e-118 428.7 345 66.4
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 4.2e-118 428.7 326 69.3
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 2.7e-117 426.0 355 64.5
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 1.0e-116 424.1 345 65.8
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 1.0e-116 424.1 326 69.6
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 2.3e-116 422.9 353 66.3
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 2.3e-116 422.9 363 64.2
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 3.9e-116 422.2 352 61.6
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 3.9e-116 422.2 348 65.2
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 3.3e-115 419.1 365 63.0
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 5.7e-115 418.3 356 63.2
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 7.4e-115 417.9 317 69.1
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 9.7e-115 417.5 316 65.5
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 2.2e-114 416.4 337 66.5
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 3.7e-114 415.6 326 68.4
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 3.7e-114 415.6 362 62.7
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 6.3e-114 414.8 326 69.0
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 1.4e-113 413.7 326 68.1
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 3.1e-113 412.5 338 65.7
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 5.3e-113 411.8 319 69.3
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 9.1e-113 411.0 355 62.5
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 3.5e-112 409.1 331 66.5
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 4.5e-112 408.7 422 55.0
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 5.9e-112 408.3 343 62.4
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 5.0e-111 405.2 344 62.2
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 6.5e-111 404.8 344 61.9
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 8.5e-111 404.4 332 66.3
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 1.1e-110 404.1 328 68.0
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 2.7e-109 399.4 344 61.6
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 4.0e-108 395.6 353 63.2
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 5.2e-108 395.2 344 60.5
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 6.7e-108 394.8 351 57.0
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 2.6e-107 392.9 345 60.3
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 2.2e-106 389.8 333 66.1
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 7.0e-105 384.8 310 66.8
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 9.1e-105 384.4 344 59.9
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 4.5e-104 382.1 323 66.3
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 7.7e-104 381.3 344 57.3
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 8.5e-103 377.9 345 57.7
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 1.1e-102 377.5 318 64.5
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 2.5e-102 376.3 345 58.6
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 3.2e-102 375.9 344 57.3
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 7.2e-102 374.8 350 58.6
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 1.6e-101 373.6 320 63.4
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 2.1e-101 373.2 333 59.8
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 6.1e-101 371.7 344 57.3
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 8.0e-101 371.3 313 63.9
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 1.0e-100 370.9 345 58.6
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 4.0e-100 369.0 313 62.9
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 2.6e-99 366.3 313 63.6
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 2.6e-99 366.3 333 59.5
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 1.7e-98 363.6 333 59.2
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 3.7e-98 362.5 276 62.7
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 9.1e-97 357.8 296 65.5
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 1.3e-95 354.0 317 65.6
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 2.3e-95 353.2 339 51.0
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.8e-92 343.6 341 60.1
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 1.2e-91 340.9 338 55.6
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 5.7e-91 338.6 289 65.4
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 2.8e-90 336.3 257 61.9
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 8.3e-90 334.7 413 47.7
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 8.3e-90 334.7 344 54.7
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 7.0e-89 331.6 269 59.9
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 7.0e-89 331.6 273 60.8
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 3.5e-88 329.3 188 79.8
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 3.3e-86 322.8 335 55.5
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.0e-84 317.8 331 53.5
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 4.0e-84 315.8 266 57.5
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 5.2e-84 315.5 344 54.1
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 1.5e-83 313.9 264 58.0
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 7.5e-83 311.6 284 62.3
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 7.5e-83 311.6 294 61.6
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 9.2e-81 304.7 359 53.5
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 3.5e-80 302.8 320 49.7
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 7.8e-80 301.6 313 55.9
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 3.0e-79 299.7 324 47.2
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 7.3e-78 295.0 304 51.6
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 4.7e-77 292.4 316 54.4
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 8.9e-76 288.1 187 68.4
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 5.8e-75 285.4 344 45.9
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 1.0e-71 274.6 317 49.5
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 1.7e-71 273.9 322 48.8
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 1.7e-71 273.9 324 51.5
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 1.9e-70 270.4 319 49.2
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 1.9e-70 270.4 325 50.2
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 2.5e-70 270.0 320 50.9
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 5.6e-70 268.9 322 50.6
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 6.2e-69 265.4 318 49.4
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 8.1e-69 265.0 324 46.9
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 2.0e-67 260.4 322 51.2
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 4.4e-67 259.2 322 49.1
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 1.4e-65 254.2 325 46.5
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 1.9e-65 253.8 324 48.1
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 9.5e-62 241.5 191 60.7
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 2.2e-58 230.3 220 47.3
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 1.1e-52 211.5 305 46.2
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 3.1e-52 209.9 315 41.6
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 4.4e-51 206.1 321 39.9
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 1.2e-48 198.0 361 39.1
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 1.6e-48 197.6 110 82.7
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.3e-47 193.7 168 56.5
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 5.1e-47 192.6 109 79.8
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 3.3e-38 163.3 93 77.4
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 1.6e-16 91.3 121 36.4
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 1.4e-12 78.2 38 84.2
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 1.8e-12 77.8 48 68.8
QL04p005704 Quercus lobata HOM05D003920 ORTHO05D004877 1.7e-10 71.2 65 66.2
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 2.2e-10 70.9 43 79.1
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 2.5e-09 67.4 44 72.7
BolC8t49779H Brassica oleracea HOM05D003920 ORTHO05D017698 9.4e-09 65.5 40 77.5
BraA08t34788Z Brassica rapa HOM05D003920 ORTHO05D017698 9.4e-09 65.5 40 77.5
MBI17_g06171_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D017698 3.6e-08 63.5 82 45.1
QL05p013448 Quercus lobata HOM05D001342 ORTHO05D017698 6.7e-07 59.3 45 66.7
C08p21400 Brassica napus HOM05D003920 ORTHO05D017698 4.4e-06 56.6 50 62.0


User provided reference genes

Program Settings