Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01381 Erythranthe guttata HOM05D002350 ORTHO05D000091 1.6e-91 339.3 161 100.0
Migut.K00531 Erythranthe guttata HOM05D002350 ORTHO05D000091 3.5e-59 231.9 152 71.7
MSTRG.10607 Avicennia marina HOM05D002350 ORTHO05D000091 4.6e-59 231.5 149 72.5
SalBow5G4215 Salvia bowleyana HOM05D002350 ORTHO05D000091 1.0e-50 203.8 153 64.1
SGA_v2.0_scaffold501G52502 Striga asiatica HOM05D002350 ORTHO05D000091 4.3e-49 198.4 150 63.3
Oeu064190.1 Olea europaea HOM05D002350 ORTHO05D000091 2.1e-43 179.5 153 59.5
Solyc12g008420.3 Solanum lycopersicum HOM05D002350 ORTHO05D000091 1.8e-39 166.4 139 59.7
Sopen12g003370 Solanum pennellii HOM05D002350 ORTHO05D000091 1.8e-39 166.4 139 59.7
Nitab4.5_0011131g0010 Nicotiana tabacum HOM05D002350 ORTHO05D000091 3.4e-38 162.2 136 59.6
PGSC0003DMG401000361 Solanum tuberosum HOM05D002350 ORTHO05D000091 5.8e-38 161.4 139 58.3
Lj4C392G1 Lonicera japonica HOM05D002350 ORTHO05D000091 7.6e-38 161.0 147 53.1
Dinv41662 Davidia involucrata HOM05D002350 ORTHO05D000091 2.2e-37 159.5 139 56.8
Nitab4.5_0001354g0020 Nicotiana tabacum HOM05D002350 ORTHO05D000091 2.2e-37 159.5 139 54.7
Nitab4.5_0000566g0160 Nicotiana tabacum HOM05D002350 ORTHO05D000091 6.5e-37 157.9 149 55.0
Nitab4.5_0000165g0030 Nicotiana tabacum HOM05D002350 ORTHO05D000091 8.4e-37 157.5 139 54.7
Cfa003192 Carpinus fangiana HOM05D002350 ORTHO05D000091 2.5e-36 156.0 139 51.8
Cc06_g10360 Coffea canephora HOM05D002350 ORTHO05D000091 5.5e-36 154.8 143 53.8
Cc06_g10350 Coffea canephora HOM05D002350 ORTHO05D000091 7.1e-36 154.5 142 54.2
HanXRQChr16g0503771 Helianthus annuus HOM05D002350 ORTHO05D000091 1.2e-35 153.7 140 50.7
MBI04_g17295_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 2.1e-35 152.9 136 50.7
Lj4C391G5 Lonicera japonica HOM05D002350 ORTHO05D000091 4.6e-35 151.8 150 51.3
GSVIVG01015313001 Vitis vinifera HOM05D002350 ORTHO05D000091 6.0e-35 151.4 143 51.7
CAN.G160.37 Capsicum annuum HOM05D002350 ORTHO05D000091 1.0e-34 150.6 139 51.8
HanXRQChr16g0507611 Helianthus annuus HOM05D002350 ORTHO05D000091 3.9e-34 148.7 133 53.4
CANSAT56G4254 Cannabis sativa HOM05D002350 ORTHO05D000091 8.7e-34 147.5 141 54.6
Solyc06g051190.3 Solanum lycopersicum HOM05D002350 ORTHO05D000091 1.1e-33 147.1 143 49.7
Sopen06g017040 Solanum pennellii HOM05D002350 ORTHO05D000091 1.1e-33 147.1 143 49.7
CAN.G90.12 Capsicum annuum HOM05D002350 ORTHO05D000091 1.9e-33 146.4 138 49.3
MBI04_g40931_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 3.3e-33 145.6 137 50.4
Actinidia32657 Actinidia chinensis HOM05D002350 ORTHO05D000091 4.3e-33 145.2 137 49.6
CSS0048603 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 5.7e-33 144.8 138 51.4
Atru.chr7.1447 Acer truncatum HOM05D002350 ORTHO05D000091 7.4e-33 144.4 139 51.8
Eucgr.C03763 Eucalyptus grandis HOM05D002350 ORTHO05D000091 7.4e-33 144.4 141 50.4
RcHm_v2.0_Chr2g0091731 Rosa chinensis HOM05D002350 ORTHO05D000091 7.4e-33 144.4 145 49.7
Lsat_1_v5_gn_8_96860 Lactuca sativa HOM05D002350 ORTHO05D000091 9.7e-33 144.1 132 52.3
Lsat_1_v5_gn_5_144600 Lactuca sativa HOM05D002350 ORTHO05D000091 2.2e-32 142.9 147 47.6
Nn8g39091 Nelumbo nucifera HOM05D002350 ORTHO05D000091 2.2e-32 142.9 135 48.1
Manes.16G110000 Manihot esculenta HOM05D002350 ORTHO05D000091 2.8e-32 142.5 140 46.4
Potri.007G081300 Populus trichocarpa HOM05D002350 ORTHO05D000091 3.7e-32 142.1 143 49.0
CiPaw.03G226000 Carya illinoinensis HOM05D002350 ORTHO05D000091 4.8e-32 141.7 136 52.2
ECA234G0874 Erigeron canadensis HOM05D002350 ORTHO05D000091 1.4e-31 140.2 141 47.5
Haze_25814 Corylus avellana HOM05D002350 ORTHO05D000091 1.8e-31 139.8 140 50.0
PGR102G2642 Punica granatum HOM05D002350 ORTHO05D000091 2.4e-31 139.4 143 49.0
Peaxi162Scf00665g00310 Petunia axillaris HOM05D002350 ORTHO05D000091 3.1e-31 139.0 118 56.8
Cfa003194 Carpinus fangiana HOM05D002350 ORTHO05D000091 5.3e-31 138.3 151 45.0
Ciclev10007331m.g Citrus clementina HOM05D002350 ORTHO05D000091 5.3e-31 138.3 141 48.9
MD15G1195400 Malus domestica HOM05D002350 ORTHO05D000091 1.5e-30 136.7 138 47.8
TAR624G0594 Trochodendron aralioides HOM05D002350 ORTHO05D000091 2.0e-30 136.3 136 50.0
MELO3C015406.2 Cucumis melo HOM05D002350 ORTHO05D000091 2.6e-30 136.0 135 50.4
PSO210G2001 Papaver somniferum HOM05D002350 ORTHO05D000091 3.4e-30 135.6 140 48.6
PSO210G7085 Papaver somniferum HOM05D002350 ORTHO05D000091 4.5e-30 135.2 140 49.3
ECA236G2339 Erigeron canadensis HOM05D002350 ORTHO05D000091 7.6e-30 134.4 136 50.0
Sabra06G0136400 Salix brachista HOM05D002350 ORTHO05D000091 7.6e-30 134.4 139 45.3
Prupe.7G221200 Prunus persica HOM05D002350 ORTHO05D000091 1.0e-29 134.0 140 49.3
CsaV3_1G039730 Cucumis sativus L. HOM05D002350 ORTHO05D000091 1.7e-29 133.3 135 49.6
CDE05G3285 Ceratophyllum demersum HOM05D002350 ORTHO05D000091 2.2e-29 132.9 136 47.8
Potri.006G164400 Populus trichocarpa HOM05D002350 ORTHO05D000091 5.0e-29 131.7 135 48.9
Haze_25813 Corylus avellana HOM05D002350 ORTHO05D000091 1.9e-28 129.8 135 46.7
FAN19G1217 Fragaria x ananassa HOM05D002350 ORTHO05D000091 2.5e-28 129.4 145 49.7
Sed0013258 Sechium edule HOM05D002350 ORTHO05D000091 2.5e-28 129.4 136 50.7
FvH4_1g05980 Fragaria vesca HOM05D002350 ORTHO05D000091 3.2e-28 129.0 145 49.0
Lj2g0003052 Lotus japonicus HOM05D002350 ORTHO05D000091 3.2e-28 129.0 136 50.0
RcHm_v2.0_Chr5g0014401 Rosa chinensis HOM05D002350 ORTHO05D000091 3.2e-28 129.0 150 45.3
Aqoxy7G03876 Aquilegia oxysepala HOM05D002350 ORTHO05D000091 4.2e-28 128.6 139 45.3
FAN26G1444 Fragaria x ananassa HOM05D002350 ORTHO05D000091 5.5e-28 128.3 145 47.6
FAN26G3334 Fragaria x ananassa HOM05D002350 ORTHO05D000091 5.5e-28 128.3 145 47.6
DCAR_010692 Daucus carota HOM05D002350 ORTHO05D000091 1.2e-27 127.1 136 46.3
Lalb_Chr14g0371831 Lupinus albus HOM05D002350 ORTHO05D000091 2.7e-27 125.9 140 49.3
arahy.Tifrunner.gnm1.ann1.2RFB5Y Arachis hypogaea HOM05D002350 ORTHO05D000091 4.6e-27 125.2 139 46.0
RcHm_v2.0_Chr2g0091711 Rosa chinensis HOM05D002350 ORTHO05D000091 4.6e-27 125.2 145 46.9
Duzib168G2169 Durio zibethinus HOM05D002350 ORTHO05D000091 6.1e-27 124.8 140 48.6
MD02G1064400 Malus domestica HOM05D002350 ORTHO05D000091 6.1e-27 124.8 140 46.4
CAN.G1642.9 Capsicum annuum HOM05D002350 ORTHO05D000091 1.3e-26 123.6 168 43.5
FAN19G2534 Fragaria x ananassa HOM05D002350 ORTHO05D000091 1.8e-26 123.2 137 48.9
Duzib150G1289 Durio zibethinus HOM05D002350 ORTHO05D000091 2.3e-26 122.9 139 46.8
Gohir.A07G008300 Gossypium hirsutum HOM05D002350 ORTHO05D000091 3.0e-26 122.5 139 48.2
vmacro06244 Vaccinium macrocarpon HOM05D002350 ORTHO05D000091 3.0e-26 122.5 143 45.5
CANSAT56G1437 Cannabis sativa HOM05D002350 ORTHO05D000091 3.9e-26 122.1 147 42.2
Duzib168G1106 Durio zibethinus HOM05D002350 ORTHO05D000091 5.1e-26 121.7 141 46.8
FvH4_1g05990 Fragaria vesca HOM05D002350 ORTHO05D000091 6.7e-26 121.3 137 48.2
PSO832G0190 Papaver somniferum HOM05D002350 ORTHO05D000091 1.5e-25 120.2 148 44.6
Thecc.09G101800 Theobroma cacao HOM05D002350 ORTHO05D000091 1.5e-25 120.2 143 47.6
Gohir.D07G008700 Gossypium hirsutum HOM05D002350 ORTHO05D000091 2.5e-25 119.4 139 48.2
Rhsim03G0238400 Rhododendron simsii HOM05D002350 ORTHO05D000091 3.3e-25 119.0 142 45.8
AUR62021424 Chenopodium quinoa HOM05D002350 ORTHO05D000091 4.3e-25 118.6 135 43.0
Gorai.001G008800 Gossypium raimondii HOM05D002350 ORTHO05D000091 4.3e-25 118.6 139 48.2
Glyma.01G008700 Glycine max HOM05D002350 ORTHO05D000091 5.7e-25 118.2 137 45.3
Phvul.004G176400 Phaseolus vulgaris HOM05D002350 ORTHO05D000091 9.7e-25 117.5 137 49.6
FAN23G2545 Fragaria x ananassa HOM05D002350 ORTHO05D000091 1.7e-24 116.7 136 47.8
AL3G48270 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 2.8e-24 115.9 136 44.1
A10p17220 Brassica napus HOM05D002350 ORTHO05D000091 2.8e-24 115.9 139 41.0
Rhsim03G0237500 Rhododendron simsii HOM05D002350 ORTHO05D000091 2.8e-24 115.9 144 45.8
Hund26256 Selenicereus undatus HOM05D002350 ORTHO05D000091 6.3e-24 114.8 144 43.8
CARHR110370 Cardamine hirsuta HOM05D002350 ORTHO05D000091 8.2e-24 114.4 137 44.5
AT2G19930 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 1.1e-23 114.0 136 44.1
Rhsim03G0237700 Rhododendron simsii HOM05D002350 ORTHO05D000091 1.1e-23 114.0 142 45.8
Medtr6g088660 Medicago truncatula HOM05D002350 ORTHO05D000091 1.8e-23 113.2 142 42.3
Psat1g046880 Pisum sativum HOM05D002350 ORTHO05D000091 1.8e-23 113.2 136 44.1
TPR.G21372 Trifolium pratense HOM05D002350 ORTHO05D000091 1.8e-23 113.2 136 43.4
AT2G19910 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 3.1e-23 112.5 136 42.6
arahy.Tifrunner.gnm1.ann1.7X0VYH Arachis hypogaea HOM05D002350 ORTHO05D000091 4.1e-23 112.1 166 38.6
AUR62010903 Chenopodium quinoa HOM05D002350 ORTHO05D000091 5.3e-23 111.7 137 41.6
ClCG03G016200 Citrullus lanatus HOM05D002350 ORTHO05D000091 5.3e-23 111.7 136 46.3
Ca_25564_v3 Cicer arietinum L. HOM05D002350 ORTHO05D000091 9.1e-23 110.9 136 44.9
COL.COLO4_34763 Corchorus olitorius HOM05D002350 ORTHO05D000091 1.2e-22 110.5 139 44.6
AL3G48310 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 3.4e-22 109.0 136 41.2
BraA10t43806Z Brassica rapa HOM05D002350 ORTHO05D000091 4.5e-22 108.6 152 39.5
EL10Ac8g18396 Beta vulgaris HOM05D002350 ORTHO05D000091 7.7e-22 107.8 140 40.0
BraA09t41291Z Brassica rapa HOM05D002350 ORTHO05D000091 7.7e-22 107.8 136 42.6
Thhalv10001897m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 7.7e-22 107.8 137 44.5
BcaC07g41231 Brassica carinata HOM05D002350 ORTHO05D000091 1.0e-21 107.5 136 43.4
BcaC06g36654 Brassica carinata HOM05D002350 ORTHO05D000091 1.3e-21 107.1 137 43.1
C07p01790 Brassica napus HOM05D002350 ORTHO05D000091 1.3e-21 107.1 137 43.1
BolC7t40582H Brassica oleracea HOM05D002350 ORTHO05D000091 1.3e-21 107.1 137 43.1
THA.LOC104808318 Tarenaya hassleriana HOM05D002350 ORTHO05D000091 1.3e-21 107.1 141 43.3
A09p59080 Brassica napus HOM05D002350 ORTHO05D000091 2.9e-21 105.9 136 42.6
VMungo0464G0493 Vigna mungo HOM05D002350 ORTHO05D000091 2.9e-21 105.9 136 43.4
Sc08g0007950 Simmondsia chinensis HOM05D002350 ORTHO05D000091 5.0e-21 105.1 138 42.8
Aa31LG8G16870 Aethionema arabicum HOM05D002350 ORTHO05D000091 6.5e-21 104.8 142 40.8
C08p42360 Brassica napus HOM05D002350 ORTHO05D000091 8.5e-21 104.4 136 42.6
BolC8t51798H Brassica oleracea HOM05D002350 ORTHO05D000091 8.5e-21 104.4 136 42.6
BraA07t27876Z Brassica rapa HOM05D002350 ORTHO05D000091 8.5e-21 104.4 137 42.3
BcaB08g34892 Brassica carinata HOM05D002350 ORTHO05D000091 1.1e-20 104.0 139 40.3
Carub.0003s3418 Capsella rubella HOM05D002350 ORTHO05D000091 1.1e-20 104.0 136 39.7
Sp3g33240 Schrenkiella parvula HOM05D002350 ORTHO05D000091 1.4e-20 103.6 138 41.3
AL3G48290 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 5.5e-20 101.7 136 40.4
SEGI_40988 Sequoiadendron giganteum HOM05D002350 ORTHO05D000091 5.5e-20 101.7 146 39.7
ATR0705G139 Amborella trichopoda HOM05D002350 ORTHO05D000091 7.2e-20 101.3 136 41.9
DCAR_018431 Daucus carota HOM05D002350 ORTHO05D000091 1.2e-19 100.5 136 37.5
Os01g0197900 Oryza sativa ssp. japonica HOM05D002350 ORTHO05D000091 2.1e-19 99.8 149 37.6
Os01g0198000 Oryza sativa ssp. japonica HOM05D002350 ORTHO05D000091 2.7e-19 99.4 144 38.2
Ah.14g083290 Amaranthus hybridus HOM05D002350 ORTHO05D000091 3.6e-19 99.0 134 46.3
MSTRG.19559 Avicennia marina HOM05D002350 ORTHO05D000091 4.7e-19 98.6 82 53.7
arahy.Tifrunner.gnm1.ann1.HAD3B9 Arachis hypogaea HOM05D002350 ORTHO05D000091 7.9e-19 97.8 139 38.8
Carub.0003s3417 Capsella rubella HOM05D002350 ORTHO05D000091 7.9e-19 97.8 138 37.7
TPR.G40047 Trifolium pratense HOM05D002350 ORTHO05D000091 3.0e-18 95.9 141 41.8
CARHR110360 Cardamine hirsuta HOM05D002350 ORTHO05D000091 8.8e-18 94.4 136 41.2
AUR62021426 Chenopodium quinoa HOM05D002350 ORTHO05D000091 2.0e-17 93.2 146 43.2
BcaC06g36656 Brassica carinata HOM05D002350 ORTHO05D000091 3.3e-17 92.4 152 36.8
BolC7t40580H Brassica oleracea HOM05D002350 ORTHO05D000091 3.3e-17 92.4 152 36.8
QL02p042039 Quercus lobata HOM05D002350 ORTHO05D000091 5.7e-17 91.7 83 49.4
C07p01760 Brassica napus HOM05D002350 ORTHO05D000091 7.4e-17 91.3 152 36.2
MBI04_g30106_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 2.8e-16 89.4 84 47.6
BcaB03g16779 Brassica carinata HOM05D002350 ORTHO05D000091 3.7e-16 89.0 152 36.8
AagrBONN_evm.TU.Sc2ySwM_117.904 Anthoceros agrestis HOM05D002350 ORTHO05D000091 4.8e-16 88.6 143 35.7
Thhalv10001896m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 4.8e-16 88.6 113 40.7
HanXRQChr16g0503791 Helianthus annuus HOM05D002350 ORTHO05D000091 4.8e-16 88.6 85 47.1
CARHR110340 Cardamine hirsuta HOM05D002350 ORTHO05D000091 1.8e-15 86.7 130 40.8
BraA07t27873Z Brassica rapa HOM05D002350 ORTHO05D000091 2.0e-14 83.2 152 34.2
AUR62010902 Chenopodium quinoa HOM05D002350 ORTHO05D000091 3.8e-13 79.0 119 41.2
Zm00001eb088520 Zea mays HOM05D002350 ORTHO05D000091 2.5e-12 76.3 116 37.1
FAN28G2427 Fragaria x ananassa HOM05D002350 ORTHO05D000091 4.2e-12 75.5 73 49.3
Medtr8g064670 Medicago truncatula HOM05D002350 ORTHO05D000091 7.2e-12 74.7 83 47.0
AUR62042309 Chenopodium quinoa HOM05D002350 ORTHO05D000091 9.4e-12 74.3 113 40.7
EL10Ac8g18397 Beta vulgaris HOM05D002350 ORTHO05D000091 6.1e-11 71.6 150 34.7
AT2G19920 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 1.4e-10 70.5 113 38.9
BcaB03g16778 Brassica carinata HOM05D002350 ORTHO05D000091 1.8e-10 70.1 142 31.0
AUR62021425 Chenopodium quinoa HOM05D002350 ORTHO05D000091 3.9e-10 68.9 102 41.2
Lj7C663T4 Lonicera japonica HOM05D002350 ORTHO05D000091 6.7e-10 68.2 71 47.9
FvH4_1g09718 Fragaria vesca HOM05D002350 ORTHO05D000091 1.1e-09 67.4 55 60.0
Mapoly0048s0033 Marchantia polymorpha HOM05D002350 ORTHO05D000091 1.1e-09 67.4 149 31.5
HanXRQChr16g0503781 Helianthus annuus HOM05D002350 ORTHO05D000091 3.3e-09 65.9 58 53.4
TPR.G9139 Trifolium pratense HOM05D002350 ORTHO05D000091 3.3e-09 65.9 61 54.1
PGSC0003DMG400015653 Solanum tuberosum HOM05D002350 ORTHO05D000091 9.7e-09 64.3 59 49.2
BcaC04g19659 Brassica carinata HOM05D002350 ORTHO05D000091 4.8e-08 62.0 77 35.1
CAN.G212.6 Capsicum annuum HOM05D002350 ORTHO05D000091 2.4e-07 59.7 95 33.7
AagrBONN_evm.TU.Sc2ySwM_117.902 Anthoceros agrestis HOM05D002350 ORTHO05D000091 3.1e-07 59.3 84 34.5


User provided reference genes

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