Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01249 Erythranthe guttata HOM05D007001 ORTHO05D005587 1.6e-261 905.6 469 100.0
Oeu029153.2 Olea europaea HOM05D007001 ORTHO05D005587 8.9e-79 298.5 398 49.0
SalBow3G2815 Salvia bowleyana HOM05D007001 ORTHO05D005587 6.4e-69 265.8 399 48.9
Nitab4.5_0000308g0260 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.7e-61 241.1 579 34.7
Oeu055597.1 Olea europaea HOM05D007001 ORTHO05D005587 3.8e-61 240.0 509 37.9
Actinidia00536 Actinidia chinensis HOM05D007001 ORTHO05D005587 7.1e-60 235.7 396 40.2
Rhsim11G0179000 Rhododendron simsii HOM05D007001 ORTHO05D005587 9.3e-60 235.3 404 41.1
Cc02_g17350 Coffea canephora HOM05D007001 ORTHO05D005587 3.5e-59 233.4 399 39.8
vmacro02090 Vaccinium macrocarpon HOM05D007001 ORTHO05D005587 2.8e-56 223.8 421 38.0
Actinidia36006 Actinidia chinensis HOM05D007001 ORTHO05D005587 1.1e-55 221.9 419 39.9
CSS0022058 Camellia sinensis var. sinensis HOM05D007001 ORTHO05D005587 9.0e-55 218.8 403 40.4
SGA_v2.0_scaffold125G33736 Striga asiatica HOM05D007001 ORTHO05D005587 3.4e-54 216.9 517 36.8
Nitab4.5_0009972g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 5.8e-54 216.1 560 33.9
Atru.chr5.3047 Acer truncatum HOM05D007001 ORTHO05D005587 2.2e-53 214.2 462 38.1
GSVIVG01023803001 Vitis vinifera HOM05D007001 ORTHO05D005587 2.2e-53 214.2 391 38.9
COL.COLO4_25959 Corchorus olitorius HOM05D007001 ORTHO05D005587 3.8e-53 213.4 453 34.7
QL11p044451 Quercus lobata HOM05D007001 ORTHO05D005587 1.4e-52 211.5 415 38.8
Nn5g29665 Nelumbo nucifera HOM05D007001 ORTHO05D005587 2.4e-52 210.7 446 37.0
Migut.B00223 Erythranthe guttata HOM05D007001 ORTHO05D005587 7.1e-52 209.1 389 41.6
Manes.04G089500 Manihot esculenta HOM05D007001 ORTHO05D005587 1.2e-51 208.4 407 37.3
PGSC0003DMG400000714 Solanum tuberosum HOM05D007001 ORTHO05D005587 2.1e-51 207.6 406 36.9
Peaxi162Scf00016g00623 Petunia axillaris HOM05D007001 ORTHO05D005587 2.7e-51 207.2 406 37.7
Haze_02407 Corylus avellana HOM05D007001 ORTHO05D005587 3.5e-51 206.8 447 37.6
Gohir.D12G029100 Gossypium hirsutum HOM05D007001 ORTHO05D005587 4.6e-51 206.5 404 37.6
Gorai.008G029800 Gossypium raimondii HOM05D007001 ORTHO05D005587 3.0e-50 203.8 404 37.4
CiPaw.06G134300 Carya illinoinensis HOM05D007001 ORTHO05D005587 5.1e-50 203.0 420 38.3
Sopen01g051970 Solanum pennellii HOM05D007001 ORTHO05D005587 8.7e-50 202.2 406 36.5
Solyc01g109780.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 1.5e-49 201.4 406 36.5
CiPaw.05G066600 Carya illinoinensis HOM05D007001 ORTHO05D005587 7.4e-49 199.1 422 37.9
Cfa004981 Carpinus fangiana HOM05D007001 ORTHO05D005587 1.3e-48 198.4 516 35.1
Duzib052G0704 Durio zibethinus HOM05D007001 ORTHO05D005587 1.6e-48 198.0 459 33.3
Duzib132G0641 Durio zibethinus HOM05D007001 ORTHO05D005587 2.8e-48 197.2 391 35.0
Manes.11G085600 Manihot esculenta HOM05D007001 ORTHO05D005587 6.2e-48 196.1 405 38.3
ECA240G0129 Erigeron canadensis HOM05D007001 ORTHO05D005587 1.4e-47 194.9 414 35.7
Thecc.02G082800 Theobroma cacao HOM05D007001 ORTHO05D005587 1.8e-47 194.5 401 35.7
Ciclev10027908m.g Citrus clementina HOM05D007001 ORTHO05D005587 9.0e-47 192.2 508 33.9
TAR376G0762 Trochodendron aralioides HOM05D007001 ORTHO05D005587 2.2e-45 187.6 453 34.0
AUR62011300 Chenopodium quinoa HOM05D007001 ORTHO05D005587 1.9e-44 184.5 409 35.2
SalBow6G2324 Salvia bowleyana HOM05D007001 ORTHO05D005587 2.1e-43 181.0 447 37.6
AUR62016758 Chenopodium quinoa HOM05D007001 ORTHO05D005587 3.5e-43 180.3 408 35.3
HanXRQChr03g0074191 Helianthus annuus HOM05D007001 ORTHO05D005587 2.5e-41 174.1 372 35.8
EL10Ac9g21706 Beta vulgaris HOM05D007001 ORTHO05D005587 4.3e-41 173.3 475 30.7
Potri.004G157000 Populus trichocarpa HOM05D007001 ORTHO05D005587 5.7e-41 172.9 487 34.3
Glyma.11G116700 Glycine max HOM05D007001 ORTHO05D005587 9.6e-41 172.2 402 35.3
Sabra09G0090900 Salix brachista HOM05D007001 ORTHO05D005587 9.6e-41 172.2 443 35.0
TWI79G0124 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 9.6e-41 172.2 418 35.2
Ah.01g019240 Amaranthus hybridus HOM05D007001 ORTHO05D005587 2.1e-40 171.0 473 31.5
Lj3g0024948 Lotus japonicus HOM05D007001 ORTHO05D005587 3.7e-40 170.2 391 35.5
Glyma.12G042500 Glycine max HOM05D007001 ORTHO05D005587 1.4e-39 168.3 477 31.7
RcHm_v2.0_Chr6g0265031 Rosa chinensis HOM05D007001 ORTHO05D005587 5.3e-39 166.4 400 34.5
FvH4_2g09190 Fragaria vesca HOM05D007001 ORTHO05D005587 2.0e-38 164.5 494 33.6
PGR042G0047 Punica granatum HOM05D007001 ORTHO05D005587 7.6e-38 162.5 391 35.8
Eucgr.G01689 Eucalyptus grandis HOM05D007001 ORTHO05D005587 6.5e-37 159.5 425 32.9
Potri.009G118651 Populus trichocarpa HOM05D007001 ORTHO05D005587 6.5e-37 159.5 507 31.2
MBI10_g06730_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 2.5e-36 157.5 451 32.4
VMungo1127G1486 Vigna mungo HOM05D007001 ORTHO05D005587 3.2e-36 157.1 481 32.0
Lalb_Chr19g0138701 Lupinus albus HOM05D007001 ORTHO05D005587 5.5e-36 156.4 393 34.4
Hund06244 Selenicereus undatus HOM05D007001 ORTHO05D005587 7.2e-36 156.0 402 32.6
TWI31G1402 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 9.3e-36 155.6 449 32.3
Nitab4.5_0008874g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.2e-35 155.2 396 32.8
Sabra04G0104900 Salix brachista HOM05D007001 ORTHO05D005587 7.9e-35 152.5 414 34.3
Cpa.g.sc17.13 Carica papaya HOM05D007001 ORTHO05D005587 1.0e-34 152.1 420 33.6
Peaxi162Scf00003g01121 Petunia axillaris HOM05D007001 ORTHO05D005587 5.1e-34 149.8 353 35.7
Nitab4.5_0007728g0020 Nicotiana tabacum HOM05D007001 ORTHO05D005587 3.3e-33 147.1 228 40.8
Ca_20889_v3 Cicer arietinum L. HOM05D007001 ORTHO05D005587 4.3e-33 146.7 482 31.5
FAN27G0151 Fragaria x ananassa HOM05D007001 ORTHO05D005587 4.3e-33 146.7 487 32.9
MBI16_g08804_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 4.3e-33 146.7 396 33.8
PGSC0003DMG400007729 Solanum tuberosum HOM05D007001 ORTHO05D005587 5.7e-33 146.4 236 41.9
FAN15G3137 Fragaria x ananassa HOM05D007001 ORTHO05D005587 9.7e-33 145.6 424 34.4
MD10G1072800 Malus domestica HOM05D007001 ORTHO05D005587 9.7e-33 145.6 522 30.7
Prupe.8G094200 Prunus persica HOM05D007001 ORTHO05D005587 9.7e-33 145.6 472 32.4
Lalb_Chr03g0025591 Lupinus albus HOM05D007001 ORTHO05D005587 4.8e-32 143.3 388 34.5
Phvul.011G044100 Phaseolus vulgaris HOM05D007001 ORTHO05D005587 1.1e-31 142.1 475 30.7
DCAR_001566 Daucus carota HOM05D007001 ORTHO05D005587 1.4e-31 141.7 360 33.6
Aqoxy5G01586 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 1.8e-31 141.4 320 35.9
Oeu020745.1 Olea europaea HOM05D000342 ORTHO05D000217 1.8e-31 141.4 229 43.7
arahy.Tifrunner.gnm1.ann1.I3TCZM Arachis hypogaea HOM05D007001 ORTHO05D005587 3.1e-31 140.6 359 32.6
CsaV3_2G014890 Cucumis sativus L. HOM05D007001 ORTHO05D005587 4.1e-31 140.2 407 32.2
MD05G1064100 Malus domestica HOM05D007001 ORTHO05D005587 9.0e-31 139.0 383 34.5
arahy.Tifrunner.gnm1.ann1.M1RWF9 Arachis hypogaea HOM05D007001 ORTHO05D005587 2.6e-30 137.5 359 32.3
FAN24G0234 Fragaria x ananassa HOM05D007001 ORTHO05D005587 3.4e-30 137.1 475 33.1
MELO3C023308.2 Cucumis melo HOM05D007001 ORTHO05D005587 5.9e-30 136.3 391 32.5
Psat7g184200 Pisum sativum HOM05D007001 ORTHO05D005587 6.5e-29 132.9 398 30.7
Sopen10g023370 Solanum pennellii HOM05D007001 ORTHO05D005587 4.2e-28 130.2 218 40.4
Medtr4g070420 Medicago truncatula HOM05D007001 ORTHO05D005587 1.6e-27 128.3 309 35.9
Sed0007775 Sechium edule HOM05D007001 ORTHO05D005587 1.6e-27 128.3 465 31.0
TPR.G22545 Trifolium pratense HOM05D007001 ORTHO05D005587 8.8e-26 122.5 388 31.2
ClCG11G004280 Citrullus lanatus HOM05D007001 ORTHO05D005587 1.1e-25 122.1 448 31.7
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 2.8e-24 117.5 485 27.8
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 3.7e-24 117.1 479 29.4
PSO675G1875 Papaver somniferum HOM05D007001 ORTHO05D005587 4.8e-24 116.7 386 32.1
Lsat_1_v5_gn_9_108461 Lactuca sativa HOM05D007001 ORTHO05D005587 8.2e-24 115.9 412 32.0
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 8.2e-24 115.9 509 29.7
Lalb_Chr01g0002461 Lupinus albus HOM05D007001 ORTHO05D005587 2.6e-22 110.9 497 28.6
THA.LOC104804555 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 3.4e-22 110.5 426 28.4
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 5.9e-22 109.8 501 29.7
unitig_699.g19881 Utricularia gibba HOM05D007001 ORTHO05D005587 7.7e-22 109.4 382 33.8
DCAR_028976 Daucus carota HOM05D007001 ORTHO05D005587 1.0e-21 109.0 481 27.4
Aqoxy6G01158 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 1.3e-21 108.6 384 29.2
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 1.3e-21 108.6 498 27.3
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 2.2e-21 107.8 375 30.4
PSO170G6310 Papaver somniferum HOM05D007001 ORTHO05D005587 3.8e-21 107.1 362 30.1
PSO764G0276 Papaver somniferum HOM05D007001 ORTHO05D005587 8.5e-21 105.9 367 30.0
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 2.5e-20 104.4 499 29.3
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 9.4e-20 102.4 496 28.4
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 9.4e-20 102.4 496 28.4
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 4.7e-19 100.1 482 28.2
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 1.4e-18 98.6 481 28.3
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 1.4e-18 98.6 481 28.3
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 6.7e-18 96.3 488 26.8
Solyc10g052650.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 8.8e-18 95.9 79 55.7
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 5.7e-17 93.2 367 30.0
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 5.7e-17 93.2 367 30.0
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 5.7e-17 93.2 367 30.0
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 1.3e-16 92.0 496 27.6
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 4.8e-16 90.1 375 28.8
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 8.2e-16 89.4 377 28.6
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 2.9e-13 80.9 258 29.8
CARHR106580 Cardamine hirsuta HOM05D008776 ORTHO05D005587 5.0e-13 80.1 207 34.3
CDE06G0685 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 8.5e-13 79.3 200 33.5
Dinv23502 Davidia involucrata HOM05D007001 ORTHO05D005587 3.2e-12 77.4 201 35.3
Sc08g0000600 Simmondsia chinensis HOM05D007001 ORTHO05D005587 3.2e-12 77.4 271 32.5
BcaC02g07919 Brassica carinata HOM05D008776 ORTHO05D005587 3.3e-09 67.4 143 34.3
unitig_749.g13159 Utricularia gibba HOM05D066973 ORTHO05D005587 4.4e-09 67.0 227 32.6
Nn1g04928 Nelumbo nucifera HOM05D007001 ORTHO05D005587 1.3e-08 65.5 172 33.7
Haze_00347 Corylus avellana HOM05D002899 ORTHO05D003850 2.2e-08 64.7 52 59.6
Gohir.A12G029800 Gossypium hirsutum HOM05D007001 ORTHO05D005587 1.8e-07 61.6 136 33.8
BcaB03g11826 Brassica carinata HOM05D008776 ORTHO05D005587 2.4e-07 61.2 184 33.2
Zm00001eb295010 Zea mays HOM05D024721 ORTHO05D025980 3.1e-07 60.8 278 25.5
Os01g0687300 Oryza sativa ssp. japonica HOM05D024721 ORTHO05D025980 2.0e-06 58.2 419 24.3


User provided reference genes

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