Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01231 Erythranthe guttata HOM05D007227 ORTHO05D002252 1.1e-56 223.0 108 100.0
MSTRG.27703 Avicennia marina HOM05D007227 ORTHO05D002252 3.8e-17 91.7 95 51.6
MSTRG.20093 Avicennia marina HOM05D007227 ORTHO05D002252 2.7e-15 85.5 85 51.8
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 6.1e-15 84.3 89 49.4
SalBow3G1687 Salvia bowleyana HOM05D007227 ORTHO05D002252 8.8e-14 80.5 92 43.5
FAN15G1220 Fragaria x ananassa HOM05D007227 ORTHO05D002252 8.2e-12 73.9 104 43.3
FvH4_2g08520 Fragaria vesca HOM05D007227 ORTHO05D002252 3.1e-11 72.0 92 46.7
FAN24G3084 Fragaria x ananassa HOM05D007227 ORTHO05D002252 3.1e-11 72.0 92 46.7
FAN27G2103 Fragaria x ananassa HOM05D007227 ORTHO05D002252 9.1e-11 70.5 104 42.3
Glyma.11G119200 Glycine max HOM05D007227 ORTHO05D002252 1.2e-10 70.1 88 42.0
Peaxi162Scf00016g00938 Petunia axillaris HOM05D007227 ORTHO05D002252 1.6e-10 69.7 89 42.7
SalBow6G0041 Salvia bowleyana HOM05D007227 ORTHO05D002252 1.6e-10 69.7 81 46.9
SalBow6G1279 Salvia bowleyana HOM05D007227 ORTHO05D002252 1.6e-10 69.7 81 46.9
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 2.0e-10 69.3 89 42.7
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 2.0e-10 69.3 71 47.9
Glyma.12G044400 Glycine max HOM05D007227 ORTHO05D002252 2.6e-10 68.9 87 40.2
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 7.7e-10 67.4 91 40.7
Sopen01g051670 Solanum pennellii HOM05D007227 ORTHO05D002252 7.7e-10 67.4 87 39.1
Lalb_Chr23g0265441 Lupinus albus HOM05D007227 ORTHO05D002252 1.3e-09 66.6 85 40.0
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 2.2e-09 65.9 92 41.3
Nitab4.5_0001794g0120 Nicotiana tabacum HOM05D007227 ORTHO05D002252 2.9e-09 65.5 79 41.8
TPR.G9008 Trifolium pratense HOM05D007227 ORTHO05D002252 2.9e-09 65.5 87 41.4
Lsat_1_v5_gn_9_109540 Lactuca sativa HOM05D007227 ORTHO05D002252 3.8e-09 65.1 92 38.0
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 3.8e-09 65.1 86 40.7
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 3.8e-09 65.1 72 44.4
Peaxi162Scf00003g01323 Petunia axillaris HOM05D007227 ORTHO05D002252 1.1e-08 63.5 77 40.3
RcHm_v2.0_Chr6g0263881 Rosa chinensis HOM05D007227 ORTHO05D002252 1.1e-08 63.5 104 40.4
LjContig00081g0025580 Lotus japonicus HOM05D007227 ORTHO05D002252 1.5e-08 63.2 76 40.8
FAN24G0729 Fragaria x ananassa HOM05D007227 ORTHO05D002252 1.9e-08 62.8 65 50.8
TPR.G8589 Trifolium pratense HOM05D007227 ORTHO05D002252 1.9e-08 62.8 104 33.7
Lj3g0002713 Lotus japonicus HOM05D007227 ORTHO05D002252 3.2e-08 62.0 89 38.2
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 4.2e-08 61.6 73 39.7
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 4.2e-08 61.6 70 41.4
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 4.2e-08 61.6 78 37.2
Glyma.02G300900 Glycine max HOM05D007227 ORTHO05D002252 5.5e-08 61.2 83 34.9
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 5.5e-08 61.2 78 41.0
Phvul.009G024600 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 7.2e-08 60.8 79 40.5
Psat2g007200 Pisum sativum HOM05D007227 ORTHO05D002252 7.2e-08 60.8 76 40.8
arahy.Tifrunner.gnm1.ann1.3LC685 Arachis hypogaea HOM05D007227 ORTHO05D002252 9.4e-08 60.5 92 38.0
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 9.4e-08 60.5 76 43.4
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 1.2e-07 60.1 91 39.6
arahy.Tifrunner.gnm1.ann1.24P8DN Arachis hypogaea HOM05D007227 ORTHO05D002252 1.2e-07 60.1 92 37.0
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 1.2e-07 60.1 81 35.8
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 1.2e-07 60.1 86 37.2
arahy.Tifrunner.gnm1.ann1.9WD8WJ Arachis hypogaea HOM05D007227 ORTHO05D002252 1.6e-07 59.7 89 34.8
arahy.Tifrunner.gnm1.ann1.BHH580 Arachis hypogaea HOM05D007227 ORTHO05D002252 1.6e-07 59.7 83 36.1
Ah.01g019500 Amaranthus hybridus HOM05D007227 ORTHO05D002252 2.1e-07 59.3 76 42.1
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 2.1e-07 59.3 86 40.7
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 2.1e-07 59.3 72 38.9
Psat2g007160 Pisum sativum HOM05D007227 ORTHO05D002252 2.1e-07 59.3 76 38.2
arahy.Tifrunner.gnm1.ann1.16ZZBQ Arachis hypogaea HOM05D007227 ORTHO05D002252 2.7e-07 58.9 81 43.2
ECA236G1258 Erigeron canadensis HOM05D007227 ORTHO05D002252 2.7e-07 58.9 85 38.8
HanXRQChr16g0505811 Helianthus annuus HOM05D007227 ORTHO05D002252 2.7e-07 58.9 87 42.5
Lj1g0025376 Lotus japonicus HOM05D007227 ORTHO05D002252 2.7e-07 58.9 67 41.8
arahy.Tifrunner.gnm1.ann1.ZTQ30L Arachis hypogaea HOM05D007227 ORTHO05D002252 4.7e-07 58.2 81 43.2
arahy.Tifrunner.gnm1.ann1.YB55U6 Arachis hypogaea HOM05D007227 ORTHO05D002252 6.1e-07 57.8 62 40.3
HanXRQChr04g0127891 Helianthus annuus HOM05D007227 ORTHO05D002252 6.1e-07 57.8 73 43.8
CSS0026369 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 8.0e-07 57.4 76 42.1
Medtr5g095980 Medicago truncatula HOM05D007227 ORTHO05D002252 8.0e-07 57.4 80 35.0
TWI31G0501 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 1.4e-06 56.6 80 41.2
LjContig00081g0009252 Lotus japonicus HOM05D007227 ORTHO05D002252 2.3e-06 55.8 89 34.8
LjContig00272g0019714 Lotus japonicus HOM05D007227 ORTHO05D002252 2.3e-06 55.8 85 36.5
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 2.3e-06 55.8 87 36.8
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 3.0e-06 55.5 79 40.5
Sabra04G0101600 Salix brachista HOM05D007227 ORTHO05D002252 3.0e-06 55.5 86 38.4
MD00G1082000 Malus domestica HOM05D007227 ORTHO05D002252 4.0e-06 55.1 87 37.9
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 4.0e-06 55.1 75 38.7
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 4.0e-06 55.1 64 35.9
TWI75G0964 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 4.0e-06 55.1 79 40.5
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 5.2e-06 54.7 76 38.2
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 6.7e-06 54.3 66 36.4
Cc07_g14570 Coffea canephora HOM05D007227 ORTHO05D002252 6.7e-06 54.3 80 38.8
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 6.7e-06 54.3 76 38.2
Lj9C368G9 Lonicera japonica HOM05D007227 ORTHO05D002252 6.7e-06 54.3 71 40.8
COL.COLO4_17856 Corchorus olitorius HOM05D007227 ORTHO05D002252 8.8e-06 53.9 86 39.5
Gohir.A01G178500 Gossypium hirsutum HOM05D007227 ORTHO05D002252 8.8e-06 53.9 76 36.8


User provided reference genes

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