Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01189 Erythranthe guttata HOM05D006253 ORTHO05D007666 4.4e-26 120.6 62 100.0
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 6.6e-14 80.1 47 85.1
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 4.3e-13 77.4 47 83.0
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 7.3e-13 76.6 47 78.7
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 2.1e-12 75.1 47 83.0
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 2.8e-12 74.7 47 76.6
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 4.7e-12 73.9 47 83.0
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.1e-11 72.8 48 79.2
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.4e-11 72.4 47 80.9
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 1.4e-11 72.4 47 80.9
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 1.4e-11 72.4 47 78.7
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 1.4e-11 72.4 47 78.7
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 2.3e-11 71.6 47 74.5
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 3.1e-11 71.2 47 76.6
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 4.0e-11 70.9 47 76.6
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 5.2e-11 70.5 47 72.3
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 5.2e-11 70.5 47 76.6
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 5.2e-11 70.5 47 76.6
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 6.8e-11 70.1 47 70.2
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 6.8e-11 70.1 48 72.9
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 6.8e-11 70.1 47 70.2
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 6.8e-11 70.1 47 78.7
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 8.9e-11 69.7 47 74.5
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 1.2e-10 69.3 47 72.3
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 1.2e-10 69.3 47 72.3
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 1.5e-10 68.9 47 74.5
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.5e-10 68.9 47 74.5
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 1.5e-10 68.9 47 74.5
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 2.0e-10 68.6 47 70.2
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 2.0e-10 68.6 47 74.5
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 2.6e-10 68.2 56 62.5
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.6e-10 68.2 47 74.5
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 3.4e-10 67.8 47 72.3
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 4.4e-10 67.4 47 74.5
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 4.4e-10 67.4 47 74.5
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 4.4e-10 67.4 47 72.3
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 4.4e-10 67.4 47 72.3
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 5.8e-10 67.0 47 74.5
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 5.8e-10 67.0 47 68.1
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 7.5e-10 66.6 47 72.3
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 9.8e-10 66.2 47 72.3
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 9.8e-10 66.2 47 70.2
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.3e-09 65.9 47 70.2
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.3e-09 65.9 47 68.1
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 1.3e-09 65.9 47 70.2
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 1.3e-09 65.9 47 68.1
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 1.7e-09 65.5 47 72.3
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 2.2e-09 65.1 47 70.2
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 2.2e-09 65.1 47 70.2
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 2.2e-09 65.1 47 72.3
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 2.9e-09 64.7 47 66.0
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 2.9e-09 64.7 47 70.2
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.7e-09 64.3 47 68.1
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 3.7e-09 64.3 47 70.2
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 4.9e-09 63.9 47 70.2
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 6.4e-09 63.5 47 68.1
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 6.4e-09 63.5 47 68.1
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 6.4e-09 63.5 39 76.9
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 6.4e-09 63.5 39 76.9
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 6.4e-09 63.5 47 68.1
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 6.4e-09 63.5 47 68.1
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 6.4e-09 63.5 47 68.1
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 1.9e-08 62.0 47 66.0
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 4.1e-08 60.8 47 68.1
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 4.1e-08 60.8 39 71.8
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 5.4e-08 60.5 47 68.1
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 7.1e-08 60.1 42 69.0
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 1.6e-07 58.9 39 71.8
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.7e-07 58.2 39 71.8
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 3.5e-07 57.8 38 71.1
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 3.5e-07 57.8 47 59.6
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 1.0e-06 56.2 47 59.6
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 1.0e-06 56.2 39 69.2
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 1.7e-06 55.5 47 59.6
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 1.7e-06 55.5 47 59.6
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 2.3e-06 55.1 47 59.6
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 2.3e-06 55.1 42 66.7
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 3.9e-06 54.3 44 63.6
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 6.6e-06 53.5 47 57.4
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 6.6e-06 53.5 47 57.4
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 8.6e-06 53.1 47 57.4


User provided reference genes

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