Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.9e-69 265.8 140 100.0
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 1.2e-42 176.8 141 70.2
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 5.8e-42 174.5 142 68.3
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 4.9e-41 171.4 141 68.8
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.5e-37 159.8 144 62.5
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 2.5e-37 159.1 142 65.5
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 7.6e-34 147.5 144 61.8
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 9.9e-34 147.1 140 58.6
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 1.3e-33 146.7 148 62.8
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 8.4e-33 144.1 137 59.9
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 8.4e-33 144.1 130 64.6
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 8.4e-33 144.1 144 61.1
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 1.1e-32 143.7 110 70.9
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 1.1e-32 143.7 175 55.4
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 1.4e-32 143.3 121 71.1
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 1.4e-32 143.3 110 69.1
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 1.9e-32 142.9 104 74.0
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 2.4e-32 142.5 144 60.4
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 2.4e-32 142.5 146 58.2
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 3.2e-32 142.1 145 62.8
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 4.2e-32 141.7 148 60.8
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 5.4e-32 141.4 105 71.4
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 7.1e-32 141.0 137 62.8
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 9.3e-32 140.6 142 61.3
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 9.3e-32 140.6 106 70.8
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 9.3e-32 140.6 120 65.8
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 9.3e-32 140.6 128 60.9
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 2.7e-31 139.0 138 61.6
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 4.6e-31 138.3 108 67.6
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 7.9e-31 137.5 149 56.4
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 1.8e-30 136.3 133 59.4
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.8e-30 136.3 136 58.8
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.8e-30 136.3 130 60.0
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 2.3e-30 136.0 111 68.5
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 2.3e-30 136.0 127 59.8
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 3.0e-30 135.6 137 62.0
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 3.0e-30 135.6 105 70.5
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 3.0e-30 135.6 107 70.1
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 5.1e-30 134.8 106 71.7
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 5.1e-30 134.8 106 71.7
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 6.7e-30 134.4 108 66.7
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 6.7e-30 134.4 144 56.2
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 8.7e-30 134.0 106 67.0
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 8.7e-30 134.0 144 58.3
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 1.1e-29 133.7 120 65.0
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 1.1e-29 133.7 144 56.9
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 1.5e-29 133.3 142 57.0
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 1.5e-29 133.3 147 53.7
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 1.9e-29 132.9 148 58.1
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.9e-29 132.9 106 67.0
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 3.3e-29 132.1 133 60.2
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 4.3e-29 131.7 150 54.0
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 5.6e-29 131.3 141 57.4
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 7.4e-29 131.0 133 58.6
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 7.4e-29 131.0 139 56.8
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 7.4e-29 131.0 106 66.0
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 7.4e-29 131.0 146 56.8
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 9.6e-29 130.6 113 65.5
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 1.3e-28 130.2 106 68.9
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 1.6e-28 129.8 135 56.3
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 2.8e-28 129.0 152 53.3
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 6.2e-28 127.9 144 57.6
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 6.2e-28 127.9 143 58.0
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 8.1e-28 127.5 106 66.0
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 8.1e-28 127.5 105 65.7
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 2.4e-27 125.9 124 60.5
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 2.4e-27 125.9 146 55.5
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 3.1e-27 125.6 105 64.8
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 5.3e-27 124.8 107 65.4
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 6.9e-27 124.4 105 68.6
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 9.0e-27 124.0 107 69.2
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 1.2e-26 123.6 106 66.0
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 1.5e-26 123.2 106 67.9
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 1.5e-26 123.2 143 54.5
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.5e-26 123.2 148 54.1
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 4.5e-26 121.7 112 65.2
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 4.5e-26 121.7 120 58.3
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 4.5e-26 121.7 104 63.5
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 5.8e-26 121.3 90 68.9
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 5.8e-26 121.3 110 64.5
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 7.6e-26 120.9 109 66.1
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 7.6e-26 120.9 109 67.0
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 7.6e-26 120.9 109 67.0
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 7.6e-26 120.9 109 66.1
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 7.6e-26 120.9 82 76.8
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 9.9e-26 120.6 111 66.7
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.3e-25 120.2 133 57.9
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 1.7e-25 119.8 148 52.7
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 2.2e-25 119.4 111 64.9
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.9e-25 119.0 133 57.9
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 3.8e-25 118.6 93 69.9
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 3.2e-24 115.5 120 57.5
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 7.1e-24 114.4 110 63.6
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.2e-23 113.6 153 51.6
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 2.1e-23 112.8 110 62.7
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 4.6e-23 111.7 83 68.7
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.0e-22 110.5 93 66.7
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.3e-22 110.2 93 65.6
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 7.4e-21 104.4 86 65.1
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 2.8e-20 102.4 114 51.8
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 6.5e-17 91.3 118 46.6
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 6.5e-17 91.3 94 54.3
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 8.4e-17 90.9 79 59.5
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 5.5e-16 88.2 136 44.1
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 2.7e-15 85.9 118 51.7
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 4.6e-15 85.1 76 61.8
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 2.3e-14 82.8 115 45.2
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 8.7e-14 80.9 81 55.6
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.6e-12 76.6 98 43.9
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 1.1e-11 73.9 55 74.5
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 1.8e-11 73.2 72 58.3
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 2.4e-11 72.8 105 41.0
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 3.1e-11 72.4 78 48.7
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 2.6e-10 69.3 82 46.3
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.8e-09 65.5 67 50.7
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 5.1e-06 55.1 51 54.9


User provided reference genes

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