Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01127 Erythranthe guttata HOM05D001756 ORTHO05D001581 1.6e-36 155.6 78 100.0
Oeu028918.1 Olea europaea HOM05D001756 ORTHO05D001581 7.8e-12 73.6 82 51.2
Cc02_g20030 Coffea canephora HOM05D001756 ORTHO05D001581 1.0e-11 73.2 87 50.6
Eucgr.H02324 Eucalyptus grandis HOM05D001756 ORTHO05D001581 5.0e-11 70.9 83 49.4
CAN.G606.70 Capsicum annuum HOM05D001756 ORTHO05D001581 1.5e-10 69.3 84 45.2
Peaxi162Scf00016g03021 Petunia axillaris HOM05D001756 ORTHO05D001581 2.5e-10 68.6 83 47.0
Eucgr.H02325 Eucalyptus grandis HOM05D001756 ORTHO05D001581 5.6e-10 67.4 83 48.2
GSVIVG01037055001 Vitis vinifera HOM05D001756 ORTHO05D001581 2.8e-09 65.1 83 48.2
MD05G1105500 Malus domestica HOM05D001756 ORTHO05D001581 4.7e-09 64.3 83 47.0
RhsimUnG0041200 Rhododendron simsii HOM05D001756 ORTHO05D001581 4.7e-09 64.3 83 45.8
RhsimUnG0123200 Rhododendron simsii HOM05D001756 ORTHO05D001581 4.7e-09 64.3 83 45.8
Gorai.003G031900 Gossypium raimondii HOM05D001756 ORTHO05D001581 8.0e-09 63.5 76 51.3
Dinv23040 Davidia involucrata HOM05D001756 ORTHO05D001581 1.0e-08 63.2 80 50.0
Gohir.D03G030200 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.0e-08 63.2 76 51.3
Nitab4.5_0001099g0060 Nicotiana tabacum HOM05D001756 ORTHO05D001581 1.0e-08 63.2 84 45.2
Migut.B00462 Erythranthe guttata HOM05D001756 ORTHO05D001581 1.4e-08 62.8 79 44.3
Lsat_1_v5_gn_9_113360 Lactuca sativa HOM05D001756 ORTHO05D001581 1.4e-08 62.8 82 47.6
PGR004G0933 Punica granatum HOM05D001756 ORTHO05D001581 2.3e-08 62.0 78 48.7
Oeu025312.1 Olea europaea HOM05D001756 ORTHO05D001581 3.1e-08 61.6 85 49.4
COL.COLO4_11608 Corchorus olitorius HOM05D001756 ORTHO05D001581 5.2e-08 60.8 77 48.1
Gohir.A02G150100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 5.2e-08 60.8 75 46.7
SalBow6G1126 Salvia bowleyana HOM05D001756 ORTHO05D001581 5.2e-08 60.8 79 53.2
Dinv09540 Davidia involucrata HOM05D001756 ORTHO05D001581 6.8e-08 60.5 77 49.4
CSS0040959 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 8.9e-08 60.1 82 45.1
TAR628G0014 Trochodendron aralioides HOM05D001756 ORTHO05D001581 8.9e-08 60.1 83 48.2
PGSC0003DMG400025738 Solanum tuberosum HOM05D001756 ORTHO05D001581 1.5e-07 59.3 85 44.7
TAR376G0419 Trochodendron aralioides HOM05D001756 ORTHO05D001581 1.5e-07 59.3 81 46.9
PSO170G3613 Papaver somniferum HOM05D001756 ORTHO05D001581 2.0e-07 58.9 74 47.3
Solyc01g106830.4 Solanum lycopersicum HOM05D001756 ORTHO05D001581 2.0e-07 58.9 85 45.9
Sopen01g049140 Solanum pennellii HOM05D001756 ORTHO05D001581 2.0e-07 58.9 74 48.6
Atru.chr5.2299 Acer truncatum HOM05D001756 ORTHO05D001581 2.6e-07 58.5 77 45.5
Cfa004702 Carpinus fangiana HOM05D001756 ORTHO05D001581 2.6e-07 58.5 79 45.6
Gohir.A11G212500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 3.4e-07 58.2 80 47.5
Gohir.D11G210700 Gossypium hirsutum HOM05D001756 ORTHO05D001581 3.4e-07 58.2 83 44.6
Gorai.007G226000 Gossypium raimondii HOM05D001756 ORTHO05D001581 3.4e-07 58.2 83 44.6
SalBow6G2956 Salvia bowleyana HOM05D001756 ORTHO05D001581 3.4e-07 58.2 64 50.0
TWI59G0044 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 3.4e-07 58.2 79 44.3
Prupe.8G150200 Prunus persica HOM05D001756 ORTHO05D001581 4.4e-07 57.8 81 45.7
CSS0000381 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.8e-07 57.4 82 43.9
Dinv16070 Davidia involucrata HOM05D001756 ORTHO05D001581 5.8e-07 57.4 78 47.4
Duzib116G0348 Durio zibethinus HOM05D001756 ORTHO05D001581 5.8e-07 57.4 74 44.6
PSO017G5266 Papaver somniferum HOM05D001756 ORTHO05D001581 5.8e-07 57.4 74 47.3
COL.COLO4_28472 Corchorus olitorius HOM05D001756 ORTHO05D001581 7.5e-07 57.0 74 45.9
Lj4A164T42 Lonicera japonica HOM05D001756 ORTHO05D001581 7.5e-07 57.0 79 45.6
unitig_62.g23428 Utricularia gibba HOM05D001756 ORTHO05D001581 7.5e-07 57.0 51 47.1
Glyma.17G159000 Glycine max HOM05D001756 ORTHO05D001581 9.8e-07 56.6 76 39.5
PGR142G2395 Punica granatum HOM05D001756 ORTHO05D001581 9.8e-07 56.6 74 41.9
Actinidia04395 Actinidia chinensis HOM05D001756 ORTHO05D001581 1.3e-06 56.2 76 46.1
arahy.Tifrunner.gnm1.ann1.KSYJ7I Arachis hypogaea HOM05D001756 ORTHO05D001581 1.3e-06 56.2 63 46.0
Cc07_g07320 Coffea canephora HOM05D001756 ORTHO05D001581 1.3e-06 56.2 81 46.9
Dinv44936 Davidia involucrata HOM05D001756 ORTHO05D001581 1.3e-06 56.2 75 44.0
Gohir.A06G025000 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.3e-06 56.2 74 43.2
Gohir.D06G022100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.3e-06 56.2 74 43.2
Gorai.010G026700 Gossypium raimondii HOM05D001756 ORTHO05D001581 1.3e-06 56.2 74 43.2
PGR042G3192 Punica granatum HOM05D001756 ORTHO05D001581 1.3e-06 56.2 70 48.6
TWI77G0501 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 1.3e-06 56.2 80 41.2
Ca_24672_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 1.7e-06 55.8 75 40.0
Ca_30012_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 1.7e-06 55.8 75 40.0
DCAR_028523 Daucus carota HOM05D001756 ORTHO05D001581 1.7e-06 55.8 41 56.1
Gohir.A12G078300 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.7e-06 55.8 87 42.5
HanXRQChr08g0233231 Helianthus annuus HOM05D001756 ORTHO05D001581 1.7e-06 55.8 67 49.3
HanXRQChr12g0376281 Helianthus annuus HOM05D001756 ORTHO05D001581 1.7e-06 55.8 74 41.9
Phvul.003G233400 Phaseolus vulgaris HOM05D001756 ORTHO05D001581 1.7e-06 55.8 73 37.0
Prupe.6G217500 Prunus persica HOM05D001756 ORTHO05D001581 1.7e-06 55.8 81 42.0
Thecc.01G075600 Theobroma cacao HOM05D001756 ORTHO05D001581 1.7e-06 55.8 77 44.2
ATR0739G092 Amborella trichopoda HOM05D001756 ORTHO05D001581 2.2e-06 55.5 75 41.3
arahy.Tifrunner.gnm1.ann1.F1MTJK Arachis hypogaea HOM05D001756 ORTHO05D001581 2.2e-06 55.5 80 45.0
HanXRQChr10g0305161 Helianthus annuus HOM05D001756 ORTHO05D001581 2.2e-06 55.5 74 41.9
Thecc.08G085400 Theobroma cacao HOM05D001756 ORTHO05D001581 2.2e-06 55.5 78 47.4
TWI23G1082 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 2.2e-06 55.5 73 41.1
Atru.chr3.1054 Acer truncatum HOM05D001756 ORTHO05D001581 2.9e-06 55.1 76 46.1
BolC3t18241H Brassica oleracea HOM05D001756 ORTHO05D001581 2.9e-06 55.1 76 43.4
CSS0039448 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 2.9e-06 55.1 75 44.0
CDE07G1556 Ceratophyllum demersum HOM05D001756 ORTHO05D001581 2.9e-06 55.1 72 40.3
Duzib093G0345 Durio zibethinus HOM05D001756 ORTHO05D001581 2.9e-06 55.1 78 46.2
HanXRQChr03g0074741 Helianthus annuus HOM05D001756 ORTHO05D001581 2.9e-06 55.1 77 41.6
Lsat_1_v5_gn_5_117161 Lactuca sativa HOM05D001756 ORTHO05D001581 2.9e-06 55.1 79 43.0
MD10G1110000 Malus domestica HOM05D001756 ORTHO05D001581 2.9e-06 55.1 80 42.5
MD15G1300000 Malus domestica HOM05D001756 ORTHO05D001581 2.9e-06 55.1 75 41.3
RcHm_v2.0_Chr6g0309921 Rosa chinensis HOM05D001756 ORTHO05D001581 2.9e-06 55.1 87 42.5
Actinidia28000 Actinidia chinensis HOM05D001756 ORTHO05D001581 3.7e-06 54.7 73 43.8
Cpa.g.c33491 Carica papaya HOM05D001756 ORTHO05D001581 3.7e-06 54.7 76 43.4
Duzib187G0009 Durio zibethinus HOM05D001756 ORTHO05D001581 3.7e-06 54.7 81 39.5
Sp5g12310 Schrenkiella parvula HOM05D001756 ORTHO05D001581 3.7e-06 54.7 78 44.9
TWI74G0998 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 3.7e-06 54.7 81 42.0
vmacro01947 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 3.7e-06 54.7 74 44.6
arahy.Tifrunner.gnm1.ann1.IGD037 Arachis hypogaea HOM05D001756 ORTHO05D001581 4.9e-06 54.3 91 36.3
arahy.Tifrunner.gnm1.ann1.XJGX9P Arachis hypogaea HOM05D001756 ORTHO05D001581 4.9e-06 54.3 75 45.3
BcaC01g02826 Brassica carinata HOM05D001756 ORTHO05D001581 4.9e-06 54.3 76 43.4
A06p32720 Brassica napus HOM05D001756 ORTHO05D001581 4.9e-06 54.3 76 43.4
BraA06t26202Z Brassica rapa HOM05D001756 ORTHO05D001581 4.9e-06 54.3 76 43.4
ECA234G1996 Erigeron canadensis HOM05D001756 ORTHO05D001581 4.9e-06 54.3 66 47.0
Eucgr.I02494 Eucalyptus grandis HOM05D001756 ORTHO05D001581 4.9e-06 54.3 74 44.6
Gorai.008G085100 Gossypium raimondii HOM05D001756 ORTHO05D001581 4.9e-06 54.3 85 40.0
MD02G1189200 Malus domestica HOM05D001756 ORTHO05D001581 4.9e-06 54.3 77 44.2
Potri.009G085600 Populus trichocarpa HOM05D001756 ORTHO05D001581 4.9e-06 54.3 73 45.2
SalBow3G1129 Salvia bowleyana HOM05D001756 ORTHO05D001581 4.9e-06 54.3 76 42.1
CSS0048145 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 6.4e-06 53.9 80 42.5
CAN.G1343.3 Capsicum annuum HOM05D001756 ORTHO05D001581 6.4e-06 53.9 77 45.5
Haze_10304 Corylus avellana HOM05D001756 ORTHO05D001581 6.4e-06 53.9 79 41.8
arahy.Tifrunner.gnm1.ann1.22FXNP Arachis hypogaea HOM05D001756 ORTHO05D001581 8.3e-06 53.5 80 43.8
vmacro21422 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 8.3e-06 53.5 77 40.3


User provided reference genes

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