Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01096 Erythranthe guttata HOM05D003826 ORTHO05D004479 3.3e-98 361.7 179 100.0
MSTRG.27816 Avicennia marina HOM05D003826 ORTHO05D004479 1.0e-75 287.0 175 79.4
Oeu042406.1 Olea europaea HOM05D003826 ORTHO05D004479 4.3e-74 281.6 175 77.1
Sed0006788 Sechium edule HOM05D003826 ORTHO05D004479 5.3e-72 274.6 175 72.0
Cc02_g20920 Coffea canephora HOM05D003826 ORTHO05D004479 1.2e-71 273.5 175 73.1
Migut.B00552 Erythranthe guttata HOM05D003826 ORTHO05D004479 2.9e-70 268.9 171 75.4
Gohir.A13G050900 Gossypium hirsutum HOM05D003826 ORTHO05D004479 2.9e-70 268.9 172 71.5
Eucgr.G00988 Eucalyptus grandis HOM05D003826 ORTHO05D004479 3.8e-70 268.5 172 72.1
Hma1.2p1_0908F.1_g235485 Hydrangea macrophylla HOM05D003826 ORTHO05D004479 3.8e-70 268.5 170 77.1
Manes.07G038200 Manihot esculenta HOM05D003826 ORTHO05D004479 3.8e-70 268.5 175 72.0
PGSC0003DMG400031403 Solanum tuberosum HOM05D003826 ORTHO05D004479 4.9e-70 268.1 171 76.0
Gorai.013G055500 Gossypium raimondii HOM05D003826 ORTHO05D004479 8.4e-70 267.3 172 70.9
ClCG09G016080 Citrullus lanatus HOM05D003826 ORTHO05D004479 1.4e-69 266.5 175 69.7
Actinidia28031 Actinidia chinensis HOM05D003826 ORTHO05D004479 1.9e-69 266.2 171 74.3
MSTRG.20281 Avicennia marina HOM05D003826 ORTHO05D004479 1.9e-69 266.2 171 74.3
MD05G1047400 Malus domestica HOM05D003826 ORTHO05D004479 1.9e-69 266.2 172 70.9
Duzib052G0856 Durio zibethinus HOM05D003826 ORTHO05D004479 2.4e-69 265.8 172 70.9
Potri.017G043900 Populus trichocarpa HOM05D003826 ORTHO05D004479 2.4e-69 265.8 172 72.7
Sed0018824 Sechium edule HOM05D003826 ORTHO05D004479 2.4e-69 265.8 172 73.3
Prupe.8G069800 Prunus persica HOM05D003826 ORTHO05D004479 3.2e-69 265.4 172 71.5
Cfa005734 Carpinus fangiana HOM05D003826 ORTHO05D004479 4.2e-69 265.0 172 70.9
CiPaw.05G029600 Carya illinoinensis HOM05D003826 ORTHO05D004479 4.2e-69 265.0 172 70.3
unitig_37.g12793 Utricularia gibba HOM05D003826 ORTHO05D004479 4.2e-69 265.0 175 69.7
CsaV3_7G006880 Cucumis sativus L. HOM05D003826 ORTHO05D004479 1.2e-68 263.5 175 70.3
TWI14G0912 Tripterygium wilfordii HOM05D003826 ORTHO05D004479 1.2e-68 263.5 175 69.7
Nitab4.5_0008998g0010 Nicotiana tabacum HOM05D003826 ORTHO05D004479 1.6e-68 263.1 171 73.1
Sabra17G0029800 Salix brachista HOM05D003826 ORTHO05D004479 1.6e-68 263.1 172 72.1
Ciclev10029337m.g Citrus clementina HOM05D003826 ORTHO05D004479 2.1e-68 262.7 174 70.1
Thecc.02G129300 Theobroma cacao HOM05D003826 ORTHO05D004479 2.1e-68 262.7 172 69.8
FvH4_2g11710 Fragaria vesca HOM05D003826 ORTHO05D004479 3.5e-68 261.9 172 71.5
FAN24G2578 Fragaria x ananassa HOM05D003826 ORTHO05D004479 3.5e-68 261.9 172 71.5
Manes.10G098600 Manihot esculenta HOM05D003826 ORTHO05D004479 4.6e-68 261.5 171 70.8
Nitab4.5_0002017g0010 Nicotiana tabacum HOM05D003826 ORTHO05D004479 4.6e-68 261.5 171 73.1
Rhsim05G0101900 Rhododendron simsii HOM05D003826 ORTHO05D004479 6.0e-68 261.2 171 72.5
Atru.chr6.1261 Acer truncatum HOM05D003826 ORTHO05D004479 7.9e-68 260.8 172 70.3
Atru.chr6.1269 Acer truncatum HOM05D003826 ORTHO05D004479 1.0e-67 260.4 172 70.3
Peaxi162Scf00003g03230 Petunia axillaris HOM05D003826 ORTHO05D004479 1.0e-67 260.4 171 73.7
PGSC0003DMG400033580 Solanum tuberosum HOM05D003826 ORTHO05D004479 1.3e-67 260.0 175 72.0
Solyc01g105970.3 Solanum lycopersicum HOM05D003826 ORTHO05D004479 2.3e-67 259.2 175 72.0
Sopen01g048350 Solanum pennellii HOM05D003826 ORTHO05D004479 2.3e-67 259.2 175 72.0
Haze_10523 Corylus avellana HOM05D003826 ORTHO05D004479 3.0e-67 258.8 172 69.2
MELO3C018606.2 Cucumis melo HOM05D003826 ORTHO05D004479 3.0e-67 258.8 177 70.1
CAN.G997.2 Capsicum annuum HOM05D003826 ORTHO05D004479 3.9e-67 258.5 175 70.3
vmacro19957 Vaccinium macrocarpon HOM05D003826 ORTHO05D004479 5.1e-67 258.1 171 72.5
Nitab4.5_0011038g0020 Nicotiana tabacum HOM05D003826 ORTHO05D004479 6.7e-67 257.7 175 71.4
RcHm_v2.0_Chr6g0271011 Rosa chinensis HOM05D003826 ORTHO05D004479 6.7e-67 257.7 172 70.9
TWI59G0852 Tripterygium wilfordii HOM05D003826 ORTHO05D004479 8.7e-67 257.3 175 69.1
CSS0016886 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 1.1e-66 256.9 171 71.3
CSS0036052 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 1.1e-66 256.9 171 71.3
Dinv24149 Davidia involucrata HOM05D003826 ORTHO05D004479 1.1e-66 256.9 168 75.0
Potri.017G043700 Populus trichocarpa HOM05D003826 ORTHO05D004479 1.5e-66 256.5 172 70.9
Sp3g27460 Schrenkiella parvula HOM05D003826 ORTHO05D004479 1.5e-66 256.5 174 69.0
TAR628G1674 Trochodendron aralioides HOM05D003826 ORTHO05D004479 1.5e-66 256.5 171 70.2
arahy.Tifrunner.gnm1.ann1.AL483W Arachis hypogaea HOM05D003826 ORTHO05D004479 1.9e-66 256.1 177 69.5
PGR042G0672 Punica granatum HOM05D003826 ORTHO05D004479 1.9e-66 256.1 172 68.6
Nn1g05569 Nelumbo nucifera HOM05D003826 ORTHO05D004479 2.5e-66 255.8 173 71.1
Cpa.g.sc20.1 Carica papaya HOM05D003826 ORTHO05D004479 3.3e-66 255.4 170 70.6
QL11p025207 Quercus lobata HOM05D003826 ORTHO05D004479 4.3e-66 255.0 175 69.7
Aa31LG8G12520 Aethionema arabicum HOM05D003826 ORTHO05D004479 7.4e-66 254.2 172 69.2
arahy.Tifrunner.gnm1.ann1.8F9AHD Arachis hypogaea HOM05D003826 ORTHO05D004479 7.4e-66 254.2 177 68.4
Medtr2g009600 Medicago truncatula HOM05D003826 ORTHO05D004479 7.4e-66 254.2 176 66.5
Psat1g214120 Pisum sativum HOM05D003826 ORTHO05D004479 9.6e-66 253.8 176 65.9
arahy.Tifrunner.gnm1.ann1.JLXM4S Arachis hypogaea HOM05D003826 ORTHO05D004479 1.3e-65 253.4 167 72.5
arahy.Tifrunner.gnm1.ann1.QQ8XF2 Arachis hypogaea HOM05D003826 ORTHO05D004479 1.3e-65 253.4 167 72.5
CSS0050337 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 1.3e-65 253.4 166 73.5
TPR.G9500 Trifolium pratense HOM05D003826 ORTHO05D004479 1.3e-65 253.4 170 68.2
BolC9t54449H Brassica oleracea HOM05D003826 ORTHO05D004479 1.6e-65 253.1 174 67.8
Lj5A230G39 Lonicera japonica HOM05D003826 ORTHO05D004479 1.6e-65 253.1 155 77.4
Thhalv10022868m.g Eutrema salsugineum HOM05D003826 ORTHO05D004479 3.7e-65 251.9 174 68.4
MBI16_g12461_MAGBIO Magnolia biondii HOM05D003826 ORTHO05D004479 3.7e-65 251.9 174 69.5
BcaC04g22775 Brassica carinata HOM05D003826 ORTHO05D004479 4.8e-65 251.5 174 67.2
C09p15420 Brassica napus HOM05D003826 ORTHO05D004479 4.8e-65 251.5 174 67.2
A09p13020 Brassica napus HOM05D003826 ORTHO05D004479 8.1e-65 250.8 174 66.7
BraA09t36947Z Brassica rapa HOM05D003826 ORTHO05D004479 8.1e-65 250.8 174 66.7
unitig_46.g18833 Utricularia gibba HOM05D003826 ORTHO05D004479 8.1e-65 250.8 175 70.3
Carub.0003s2836 Capsella rubella HOM05D003826 ORTHO05D004479 1.1e-64 250.4 172 66.9
VMungo0540G1729 Vigna mungo HOM05D003826 ORTHO05D004479 1.1e-64 250.4 176 65.3
THA.LOC104807183 Tarenaya hassleriana HOM05D003826 ORTHO05D004479 1.4e-64 250.0 175 66.3
BcaB02g11486 Brassica carinata HOM05D003826 ORTHO05D004479 2.4e-64 249.2 174 66.7
CANSAT54G1150 Cannabis sativa HOM05D003826 ORTHO05D004479 4.0e-64 248.4 175 68.0
Glyma.13G256700 Glycine max HOM05D003826 ORTHO05D004479 4.0e-64 248.4 176 64.8
Lalb_Chr05g0216361 Lupinus albus HOM05D003826 ORTHO05D004479 4.0e-64 248.4 167 69.5
HanXRQChr08g0227191 Helianthus annuus HOM05D003826 ORTHO05D004479 5.3e-64 248.1 171 69.0
CARHR104200 Cardamine hirsuta HOM05D003826 ORTHO05D004479 6.9e-64 247.7 174 66.1
Sc18g0007060 Simmondsia chinensis HOM05D003826 ORTHO05D004479 6.9e-64 247.7 171 66.7
AL3G45800 Arabidopsis lyrata HOM05D003826 ORTHO05D004479 9.0e-64 247.3 172 66.9
DCAR_003601 Daucus carota HOM05D003826 ORTHO05D004479 9.0e-64 247.3 170 70.0
Lj6g0003535 Lotus japonicus HOM05D003826 ORTHO05D004479 9.0e-64 247.3 169 66.9
Aqoxy6G00874 Aquilegia oxysepala HOM05D003826 ORTHO05D004479 1.2e-63 246.9 168 69.6
ECA236G1467 Erigeron canadensis HOM05D003826 ORTHO05D000778 2.0e-63 246.1 171 69.0
Duzib147G0892 Durio zibethinus HOM05D003826 ORTHO05D004479 2.6e-63 245.7 168 68.5
TAR376G0575 Trochodendron aralioides HOM05D003826 ORTHO05D004479 3.4e-63 245.4 171 69.0
Phvul.002G212900 Phaseolus vulgaris HOM05D003826 ORTHO05D004479 7.6e-63 244.2 174 66.1
Phvul.006G202000 Phaseolus vulgaris HOM05D003826 ORTHO05D004479 7.6e-63 244.2 171 66.1
GSVIVG01015652001 Vitis vinifera HOM05D003826 ORTHO05D004479 1.7e-62 243.0 158 71.5
EL10Ac9g22073 Beta vulgaris HOM05D003826 ORTHO05D004479 3.8e-62 241.9 167 67.7
PSO541G0595 Papaver somniferum HOM05D003826 ORTHO05D004479 2.5e-61 239.2 174 64.9
Ca_00163_v3 Cicer arietinum L. HOM05D003826 ORTHO05D004479 4.2e-61 238.4 176 63.1
Thecc.01G090400 Theobroma cacao HOM05D003826 ORTHO05D004479 9.3e-61 237.3 175 65.1
Zm00001eb215290 Zea mays HOM05D003826 ORTHO05D004479 9.3e-61 237.3 167 67.7
Os03g0737400 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 1.2e-60 236.9 169 65.7
CDE04G3107 Ceratophyllum demersum HOM05D003826 ORTHO05D004479 1.6e-60 236.5 168 66.1
Cpa.g.sc55.25 Carica papaya HOM05D003826 ORTHO05D004479 2.7e-60 235.7 173 64.7
Dinv13602 Davidia involucrata HOM05D003826 ORTHO05D004479 3.5e-60 235.3 167 66.5
MD01G1039300 Malus domestica HOM05D003826 ORTHO05D004479 3.5e-60 235.3 171 66.1
Cfa006882 Carpinus fangiana HOM05D003826 ORTHO05D004479 7.9e-60 234.2 168 66.1
Haze_03870 Corylus avellana HOM05D003826 ORTHO05D004479 1.0e-59 233.8 168 66.1
Medtr4g093560 Medicago truncatula HOM05D003826 ORTHO05D004479 1.8e-59 233.0 174 65.5
Prupe.6G201600 Prunus persica HOM05D003826 ORTHO05D004479 3.0e-59 232.3 170 65.9
Manes.12G126200 Manihot esculenta HOM05D003826 ORTHO05D004479 3.9e-59 231.9 172 65.7
PGR102G1409 Punica granatum HOM05D003826 ORTHO05D004479 5.1e-59 231.5 167 65.9
Lalb_Chr16g0382941 Lupinus albus HOM05D003826 ORTHO05D004479 6.7e-59 231.1 174 66.1
Cc07_g14100 Coffea canephora HOM05D003826 ORTHO05D004479 8.7e-59 230.7 174 64.9
Psat7g101120 Pisum sativum HOM05D003826 ORTHO05D004479 1.1e-58 230.3 174 64.9
COL.COLO4_32389 Corchorus olitorius HOM05D003826 ORTHO05D004479 4.3e-58 228.4 172 62.8
Glyma.07G181900 Glycine max HOM05D003826 ORTHO05D004479 7.4e-58 227.6 174 60.3
Gorai.008G017400 Gossypium raimondii HOM05D003826 ORTHO05D004479 7.4e-58 227.6 171 63.2
Hma1.2p1_1058F.1_g252870 Hydrangea macrophylla HOM05D003826 ORTHO05D004479 7.4e-58 227.6 166 65.7
Lj4g0024713 Lotus japonicus HOM05D003826 ORTHO05D004479 7.4e-58 227.6 174 63.2
Atru.chr3.1247 Acer truncatum HOM05D003826 ORTHO05D004479 9.6e-58 227.3 166 63.9
Gohir.D12G017100 Gossypium hirsutum HOM05D003826 ORTHO05D004479 1.3e-57 226.9 174 62.6
CiPaw.07G047500 Carya illinoinensis HOM05D003826 ORTHO05D004479 2.8e-57 225.7 163 67.5
Ah.03g139970 Amaranthus hybridus HOM05D003826 ORTHO05D004479 1.4e-56 223.4 163 65.0
TPR.G2887 Trifolium pratense HOM05D003826 ORTHO05D004479 1.2e-55 220.3 174 62.1
arahy.Tifrunner.gnm1.ann1.8NDV1J Arachis hypogaea HOM05D003826 ORTHO05D004479 5.8e-55 218.0 174 60.9
SGA_v2.0_scaffold83G26375 Striga asiatica HOM05D003826 ORTHO05D004479 2.2e-54 216.1 132 77.3
FvH4_1g19640 Fragaria vesca HOM05D003826 ORTHO05D004479 2.9e-54 215.7 170 64.7
FAN19G1458 Fragaria x ananassa HOM05D003826 ORTHO05D004479 2.9e-54 215.7 170 64.7
Os03g0737300 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 2.9e-54 215.7 178 59.0
Lsat_1_v5_gn_7_82781 Lactuca sativa HOM05D003826 ORTHO05D004479 6.5e-54 214.5 173 64.7
HPP92_016899 Vanilla planifolia HOM05D003826 ORTHO05D004479 8.4e-54 214.2 167 59.3
SEGI_37389 Sequoiadendron giganteum HOM05D003826 ORTHO05D004479 1.9e-53 213.0 164 62.8
arahy.Tifrunner.gnm1.ann1.MWC9N2 Arachis hypogaea HOM05D001561 ORTHO05D001715 2.5e-53 212.6 174 60.3
FAN26G3235 Fragaria x ananassa HOM05D003826 ORTHO05D004479 2.5e-53 212.6 170 63.5
FAN23G0964 Fragaria x ananassa HOM05D003826 ORTHO05D004479 5.5e-53 211.5 170 63.5
Nitab4.5_0002095g0060 Nicotiana tabacum HOM05D003826 ORTHO05D004479 2.7e-52 209.1 143 70.6
Peaxi162Scf00299g00634 Petunia axillaris HOM05D003826 ORTHO05D004479 2.3e-51 206.1 175 60.6
SMO271G0099 Selaginella moellendorffii HOM05D003826 ORTHO05D004479 2.3e-51 206.1 159 59.1
AUR62003663 Chenopodium quinoa HOM05D003826 ORTHO05D004479 3.0e-51 205.7 163 60.1
FAN28G0881 Fragaria x ananassa HOM05D003826 ORTHO05D004479 3.0e-51 205.7 184 59.2
SalBow6G1284 Salvia bowleyana HOM05D003826 ORTHO05D004479 8.7e-51 204.1 144 71.5
AagrBONN_evm.TU.Sc2ySwM_362.1195 Anthoceros agrestis HOM05D003826 ORTHO05D004479 1.1e-50 203.8 158 60.1
Lj5A230G40 Lonicera japonica HOM05D003826 ORTHO05D004479 2.5e-50 202.6 162 62.3
Pp3c1_28610 Physcomitrium patens HOM05D003826 ORTHO05D004479 4.3e-50 201.8 167 57.5
CANSAT01G0714 Cannabis sativa HOM05D003826 ORTHO05D004479 7.4e-50 201.1 163 59.5
RcHm_v2.0_Chr2g0111211 Rosa chinensis HOM05D003826 ORTHO05D004479 9.7e-50 200.7 164 64.0
AT2G14110 Arabidopsis thaliana HOM05D003826 ORTHO05D004479 2.8e-49 199.1 132 67.4
Mapoly0042s0019 Marchantia polymorpha HOM05D003826 ORTHO05D004479 1.8e-48 196.4 156 60.3
Os11g0434000 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 1.1e-45 187.2 167 58.1
Mapoly0032s0046 Marchantia polymorpha HOM05D003826 ORTHO05D004479 7.2e-45 184.5 170 52.4
Hund00378 Selenicereus undatus HOM05D003826 ORTHO05D004479 9.4e-45 184.1 135 68.9
ATR0767G074 Amborella trichopoda HOM05D003826 ORTHO05D004479 2.7e-44 182.6 129 68.2
GSVIVG01015647001 Vitis vinifera HOM05D003826 ORTHO05D004479 4.6e-44 181.8 138 66.7
SalBow8G4107 Salvia bowleyana HOM05D003826 ORTHO05D004479 7.9e-44 181.0 169 58.6
CBR_g26273 Chara braunii HOM05D003826 ORTHO05D004479 2.3e-43 179.5 154 53.9
Glyma.15G058200 Glycine max HOM05D003826 ORTHO05D004479 1.1e-42 177.2 167 52.7
ATR0767G082 Amborella trichopoda HOM05D003826 ORTHO05D004479 2.0e-42 176.4 129 65.1
RhsimUnG0154900 Rhododendron simsii HOM05D003826 ORTHO05D004479 6.9e-40 167.9 160 56.9
Hund16529 Selenicereus undatus HOM05D003826 ORTHO05D004479 2.0e-39 166.4 123 65.0
Ah.01g023970 Amaranthus hybridus HOM05D003826 ORTHO05D004479 3.4e-39 165.6 167 50.9
AUR62012887 Chenopodium quinoa HOM05D003826 ORTHO05D004479 2.9e-38 162.5 167 52.1
AUR62027111 Chenopodium quinoa HOM05D003826 ORTHO05D004479 5.0e-38 161.8 167 52.1
GSVIVG01015646001 Vitis vinifera HOM05D003826 ORTHO05D004479 5.3e-32 141.7 116 62.1
AUR62017972 Chenopodium quinoa HOM05D003826 ORTHO05D004479 3.5e-31 139.0 97 68.0
Mapoly0010s0051 Marchantia polymorpha HOM05D003826 ORTHO05D004479 1.7e-30 136.7 157 45.2
Nn5g29884 Nelumbo nucifera HOM05D003826 ORTHO05D004479 6.5e-30 134.8 90 70.0
Solyc10g047310.1 Solanum lycopersicum HOM05D003826 ORTHO05D004479 1.2e-28 130.6 98 65.3
VMungo0251G2759 Vigna mungo HOM05D003826 ORTHO05D004479 2.1e-28 129.8 95 62.1
Ciclev10026755m.g Citrus clementina HOM05D003826 ORTHO05D004479 3.0e-27 125.9 93 62.4
MD10G1054300 Malus domestica HOM05D003826 ORTHO05D004479 7.7e-23 111.3 73 68.5
Lalb_Chr18g0060401 Lupinus albus HOM05D003826 ORTHO05D004479 1.7e-22 110.2 175 39.4
Mapoly0042s0017 Marchantia polymorpha HOM05D003826 ORTHO05D004479 3.7e-17 92.4 87 55.2
Gohir.D13G049650 Gossypium hirsutum HOM05D003826 ORTHO05D004479 6.5e-14 81.6 54 72.2
THA.LOC104824951 Tarenaya hassleriana HOM05D003826 ORTHO05D004479 8.0e-12 74.7 152 36.8
Sopen10g017590 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-11 73.2 52 65.4
MCO11G520 Micromonas commoda HOM05D003826 ORTHO05D004479 4.9e-09 65.5 177 29.4
Glyma.08G067900 Glycine max HOM05D003826 ORTHO05D004479 1.8e-08 63.5 80 43.8
Cre09.g401738 Chlamydomonas reinhardtii HOM05D003826 ORTHO05D004479 5.9e-07 58.5 180 28.3
FAN15G0689 Fragaria x ananassa HOM05D003826 ORTHO05D004479 5.9e-07 58.5 34 76.5
Dinv36604 Davidia involucrata HOM05D003826 ORTHO05D004479 1.3e-06 57.4 34 73.5
MCO09G863 Micromonas commoda HOM05D003826 ORTHO05D004479 3.8e-06 55.8 64 37.5
CANSAT01G2972 Cannabis sativa HOM05D000003 ORTHO05D000004 6.6e-06 55.1 39 53.8


User provided reference genes

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