Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01012 Erythranthe guttata HOM05D005972 ORTHO05D007548 3.1e-215 751.5 381 100.0
SGA_v2.0_scaffold145G36053 Striga asiatica HOM05D005972 ORTHO05D007548 4.1e-167 591.7 381 77.4
MSTRG.27825 Avicennia marina HOM05D005972 ORTHO05D007548 3.5e-166 588.6 381 76.4
Oeu017286.1 Olea europaea HOM05D005972 ORTHO05D007548 3.5e-158 562.0 379 72.3
SalBow6G6672 Salvia bowleyana HOM05D005972 ORTHO05D007548 8.1e-155 550.8 429 65.7
Rhsim05G0111400 Rhododendron simsii HOM05D005972 ORTHO05D007548 3.4e-145 518.8 377 70.0
CSS0039579 Camellia sinensis var. sinensis HOM05D005972 ORTHO05D007548 9.3e-143 510.8 381 67.2
Gohir.A06G170300 Gossypium hirsutum HOM05D005972 ORTHO05D007548 1.3e-141 506.9 380 65.0
Prupe.1G287600 Prunus persica HOM05D005972 ORTHO05D007548 6.7e-141 504.6 377 66.3
Cfa019136 Carpinus fangiana HOM05D005972 ORTHO05D007548 1.5e-140 503.4 378 65.6
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 1.5e-140 503.4 378 64.8
Gorai.N007100 Gossypium raimondii HOM05D005972 ORTHO05D007548 1.9e-140 503.1 380 65.0
vmacro19910 Vaccinium macrocarpon HOM05D005972 ORTHO05D007548 4.3e-140 501.9 381 68.0
Gohir.D06G178100 Gossypium hirsutum HOM05D005972 ORTHO05D007548 1.3e-139 500.4 380 64.5
TWI73G1071 Tripterygium wilfordii HOM05D005972 ORTHO05D007548 1.3e-139 500.4 381 64.8
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 2.1e-139 499.6 378 64.3
MD13G1062400 Malus domestica HOM05D005972 ORTHO05D007548 2.8e-139 499.2 378 65.6
Atru.chr12.548 Acer truncatum HOM05D005972 ORTHO05D007548 6.2e-139 498.0 377 64.7
Manes.16G061300 Manihot esculenta HOM05D005972 ORTHO05D007548 1.1e-138 497.3 381 65.1
Thecc.10G118600 Theobroma cacao HOM05D005972 ORTHO05D007548 1.8e-138 496.5 381 64.8
Lj9A317T77 Lonicera japonica HOM05D005972 ORTHO05D007548 2.4e-138 496.1 378 65.3
Lalb_Chr12g0208521 Lupinus albus HOM05D005972 ORTHO05D007548 2.4e-138 496.1 382 65.2
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 3.1e-138 495.7 381 64.6
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 5.3e-138 495.0 378 64.0
ClCG05G021510 Citrullus lanatus HOM05D005972 ORTHO05D007548 9.0e-138 494.2 386 64.0
COL.COLO4_27930 Corchorus olitorius HOM05D005972 ORTHO05D007548 9.0e-138 494.2 382 64.7
CiPaw.11G025800 Carya illinoinensis HOM05D005972 ORTHO05D007548 1.5e-137 493.4 378 64.6
CANSAT80G0182 Cannabis sativa HOM05D005972 ORTHO05D007548 2.6e-137 492.7 379 64.1
Cpa.g.sc36.20 Carica papaya HOM05D005972 ORTHO05D007548 9.9e-137 490.7 379 64.6
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 1.3e-136 490.3 378 63.8
RcHm_v2.0_Chr4g0438261 Rosa chinensis HOM05D005972 ORTHO05D007548 2.9e-136 489.2 377 64.5
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea HOM05D005972 ORTHO05D007548 8.4e-136 487.6 380 63.4
Dinv24228 Davidia involucrata HOM05D001691 ORTHO05D007548 3.2e-135 485.7 363 67.8
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea HOM05D005972 ORTHO05D007548 4.2e-135 485.3 380 63.2
HanXRQChr11g0337671 Helianthus annuus HOM05D005972 ORTHO05D007548 5.5e-135 485.0 381 63.0
Lsat_1_v5_gn_7_80540 Lactuca sativa HOM05D005972 ORTHO05D007548 5.5e-135 485.0 381 63.3
QL04p050517 Quercus lobata HOM05D005972 ORTHO05D007548 5.5e-135 485.0 431 58.7
Duzib106G0263 Durio zibethinus HOM05D005972 ORTHO05D007548 1.2e-134 483.8 377 63.7
Thecc.04G023500 Theobroma cacao HOM05D005972 ORTHO05D007548 1.2e-134 483.8 381 63.5
GSVIVG01020853001 Vitis vinifera HOM05D005972 ORTHO05D007548 1.2e-134 483.8 377 64.2
Sed0010539 Sechium edule HOM05D005972 ORTHO05D007548 3.5e-134 482.3 385 62.9
Actinidia28072 Actinidia chinensis HOM05D005972 ORTHO05D007548 4.6e-134 481.9 377 63.7
Eucgr.H00021 Eucalyptus grandis HOM05D005972 ORTHO05D007548 4.6e-134 481.9 382 62.8
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 7.9e-134 481.1 377 62.9
Ca_18332_v3 Cicer arietinum L. HOM05D005972 ORTHO05D007548 1.0e-133 480.7 378 63.8
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.0e-133 480.7 377 62.6
FvH4_4g29980 Fragaria vesca HOM05D005972 ORTHO05D007548 3.9e-133 478.8 377 62.6
FAN22G0246 Fragaria x ananassa HOM05D005972 ORTHO05D007548 8.7e-133 477.6 377 62.6
Psat0s2194g0120 Pisum sativum HOM05D005972 ORTHO05D007548 8.7e-133 477.6 379 62.5
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 1.5e-132 476.9 379 63.1
Lj4g0025997 Lotus japonicus HOM05D005972 ORTHO05D007548 3.3e-132 475.7 383 62.4
Thhalv10025456m.g Eutrema salsugineum HOM05D005972 ORTHO05D007548 1.3e-131 473.8 384 60.2
PGR142G0064 Punica granatum HOM05D005972 ORTHO05D007548 1.3e-131 473.8 383 65.3
Ciclev10031864m.g Citrus clementina HOM05D005972 ORTHO05D007548 6.2e-131 471.5 378 63.2
MELO3C012375.2 Cucumis melo HOM05D005972 ORTHO05D007548 1.4e-130 470.3 382 61.3
CsaV3_5G035730 Cucumis sativus L. HOM05D005972 ORTHO05D007548 3.1e-130 469.2 382 61.0
Sc22g0000350 Simmondsia chinensis HOM05D005972 ORTHO05D007548 3.1e-130 469.2 381 62.7
Medtr4g094305 Medicago truncatula HOM05D005972 ORTHO05D007548 9.0e-130 467.6 378 61.4
AT4G15010 Arabidopsis thaliana HOM05D005972 ORTHO05D007548 1.2e-129 467.2 378 59.8
Carub.0007s2708 Capsella rubella HOM05D005972 ORTHO05D007548 2.6e-129 466.1 378 60.3
Haze_07503 Corylus avellana HOM05D005972 ORTHO05D007548 3.4e-129 465.7 378 62.2
CARHR221700 Cardamine hirsuta HOM05D005972 ORTHO05D007548 5.8e-129 464.9 381 59.1
Glyma.05G120600 Glycine max HOM05D005972 ORTHO05D007548 7.6e-129 464.5 383 60.8
THA.LOC104808523 Tarenaya hassleriana HOM05D005972 ORTHO05D007548 7.6e-129 464.5 378 60.3
TPR.G31487 Trifolium pratense HOM05D005972 ORTHO05D007548 1.3e-128 463.8 383 60.6
BraA01t02169Z Brassica rapa HOM05D005972 ORTHO05D007548 2.9e-128 462.6 379 58.8
AL7G40820 Arabidopsis lyrata HOM05D005972 ORTHO05D007548 3.8e-128 462.2 378 59.8
C01p28060 Brassica napus HOM05D005972 ORTHO05D007548 3.8e-128 462.2 379 58.8
Ah.12g057320 Amaranthus hybridus HOM05D005972 ORTHO05D007548 8.4e-128 461.1 380 60.5
BcaC09g50180 Brassica carinata HOM05D005972 ORTHO05D007548 1.4e-127 460.3 379 58.8
BolC1t02740H Brassica oleracea HOM05D005972 ORTHO05D007548 1.4e-127 460.3 379 58.8
A01p22560 Brassica napus HOM05D005972 ORTHO05D007548 1.9e-127 459.9 379 58.6
BcaNung00313 Brassica carinata HOM05D005972 ORTHO05D007548 3.2e-127 459.1 379 58.6
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 3.2e-127 459.1 387 59.7
BcaB02g07844 Brassica carinata HOM05D005972 ORTHO05D007548 7.1e-127 458.0 380 58.4
EL10Ac5g12767 Beta vulgaris HOM05D005972 ORTHO05D007548 3.5e-126 455.7 384 58.6
Aa31LG9G2330 Aethionema arabicum HOM05D005972 ORTHO05D007548 4.6e-126 455.3 381 59.3
Glyma.08G075400 Glycine max HOM05D005972 ORTHO05D007548 3.0e-125 452.6 383 59.8
PSO782G4197 Papaver somniferum HOM05D005972 ORTHO05D007548 1.5e-124 450.3 377 59.7
PSO063G2120 Papaver somniferum HOM05D005972 ORTHO05D007548 1.6e-123 446.8 377 59.4
MD16G1060700 Malus domestica HOM05D005972 ORTHO05D007548 8.2e-123 444.5 366 61.7
VMungo0251G2526 Vigna mungo HOM05D005972 ORTHO05D007548 1.3e-120 437.2 402 56.2
CDE04G1870 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 4.2e-119 432.2 381 58.3
Phvul.002G206200 Phaseolus vulgaris HOM05D005972 ORTHO05D007548 3.0e-117 426.0 383 57.7
Aqoxy4G02449 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 6.7e-117 424.9 408 55.1
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 9.7e-116 421.0 378 56.3
HPP92_021056 Vanilla planifolia HOM05D005972 ORTHO05D007548 2.2e-112 409.8 369 55.0
ATR0594G009 Amborella trichopoda HOM05D005972 ORTHO05D007548 2.5e-111 406.4 378 56.1
unitig_747.g21237 Utricularia gibba HOM05D005972 ORTHO05D007548 1.5e-108 397.1 410 55.6
Nn6g35524 Nelumbo nucifera HOM05D005972 ORTHO05D007548 5.7e-108 395.2 381 55.4
MBI03_g03956_MAGBIO Magnolia biondii HOM05D005972 ORTHO05D007548 1.3e-107 394.0 377 55.7
ATR0174G007 Amborella trichopoda HOM05D005972 ORTHO05D007548 3.7e-107 392.5 386 54.7
DCAR_006139 Daucus carota HOM05D005972 ORTHO05D007548 2.6e-105 386.3 317 61.8
Zm00001eb427070 Zea mays HOM05D005972 ORTHO05D007548 5.0e-96 355.5 374 49.5
ECA236G4176 Erigeron canadensis HOM05D005972 ORTHO05D007548 3.0e-93 346.3 269 62.8
SEGI_29488 Sequoiadendron giganteum HOM05D005972 ORTHO05D007548 1.6e-89 334.0 379 44.1
Sabra16G0132100 Salix brachista HOM05D005972 ORTHO05D007548 3.8e-88 329.3 276 59.4
SHI11404 Sapria himalayana HOM05D005972 ORTHO05D007548 1.1e-79 301.2 279 55.6
Mapoly0188s0014 Marchantia polymorpha HOM05D005972 ORTHO05D007548 9.8e-76 288.1 371 41.8
Cc02_g21900 Coffea canephora HOM05D005972 ORTHO05D007548 4.1e-74 282.7 188 71.8
COL.COLO4_10011 Corchorus olitorius HOM05D005972 ORTHO05D007548 7.3e-71 271.9 265 54.3
Pp3c15_20500 Physcomitrium patens HOM05D005972 ORTHO05D007548 1.1e-66 258.1 380 36.6
C06p16620 Brassica napus HOM05D005972 ORTHO05D007548 1.4e-45 188.0 220 45.9
BolC6t36864H Brassica oleracea HOM05D005972 ORTHO05D007548 1.4e-45 188.0 220 45.9
Sp7g13170 Schrenkiella parvula HOM05D005972 ORTHO05D007548 1.2e-44 184.9 166 54.8
A05p16900 Brassica napus HOM05D005972 ORTHO05D007548 8.4e-43 178.7 139 61.2
SpUn0490_0010 Schrenkiella parvula HOM05D005972 ORTHO05D007548 4.6e-41 172.9 121 65.3
Cc02_g21910 Coffea canephora HOM05D005972 ORTHO05D007548 8.7e-40 168.7 135 63.7
Aqoxy3G01225 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 2.4e-37 160.6 168 50.0
BcaC08g44257 Brassica carinata HOM05D005972 ORTHO05D024007 9.0e-37 158.7 112 61.6
Os04g0527500 Oryza sativa ssp. japonica HOM05D005972 ORTHO05D007548 1.7e-35 154.5 124 60.5
BraA05t20595Z Brassica rapa HOM05D005972 ORTHO05D007548 6.9e-29 132.5 381 29.7
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 1.1e-26 125.2 137 51.1
CAN.G730.17 Capsicum annuum HOM05D005972 ORTHO05D007548 3.3e-23 113.6 109 56.9
HanXRQChr15g0481161 Helianthus annuus HOM05D005972 ORTHO05D007548 9.6e-23 112.1 117 48.7
CBR_g51824 Chara braunii HOM05D005972 ORTHO05D007548 4.5e-20 103.2 118 45.8
CSS0032497 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D007548 5.7e-15 86.3 82 57.3
A05p16910 Brassica napus HOM05D005972 ORTHO05D007548 2.0e-12 77.8 54 61.1
CAN.G730.12 Capsicum annuum HOM05D005972 ORTHO05D007548 4.5e-12 76.6 50 74.0
CAN.G730.21 Capsicum annuum HOM05D005972 ORTHO05D007548 5.0e-11 73.2 52 69.2
CSS0030864 Camellia sinensis var. sinensis HOM05D000451 ORTHO05D000351 7.9e-09 65.9 80 47.5
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 1.0e-08 65.5 42 73.8
arahy.Tifrunner.gnm1.ann1.03MD5J Arachis hypogaea HOM05D000575 ORTHO05D011349 2.3e-08 64.3 78 47.4
Zm00001eb076720 Zea mays HOM05D005972 ORTHO05D007548 2.3e-08 64.3 110 39.1
CAN.G1940.2 Capsicum annuum HOM05D005972 ORTHO05D007548 3.9e-08 63.5 51 56.9
COL.COLO4_10012 Corchorus olitorius HOM05D005972 ORTHO05D007548 3.9e-08 63.5 72 51.4
arahy.Tifrunner.gnm1.ann1.YJH68W Arachis hypogaea HOM05D005972 ORTHO05D083016 8.7e-08 62.4 44 65.9
arahy.Tifrunner.gnm1.ann1.9A5XZY Arachis hypogaea HOM05D005972 ORTHO05D031493 3.3e-07 60.5 92 47.8
PSO478G3026 Papaver somniferum HOM05D000883 ORTHO05D008470 3.3e-07 60.5 274 27.7
AagrBONN_evm.TU.Sc2ySwM_228.1711 Anthoceros agrestis HOM05D000883 ORTHO05D002942 2.2e-06 57.8 135 33.3
AL8G45150 Arabidopsis lyrata HOM05D001367 ORTHO05D005289 2.8e-06 57.4 348 24.1
QL05p022739 Quercus lobata HOM05D001142 ORTHO05D004628 3.7e-06 57.0 382 23.0
Rhsim12G0198700 Rhododendron simsii HOM05D001142 ORTHO05D004628 6.3e-06 56.2 350 23.1


User provided reference genes

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