Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00988 Erythranthe guttata HOM05D002873 ORTHO05D002978 2.2e-15 85.1 67 100.0
Migut.N00991 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.9e-14 82.0 67 97.0
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 7.1e-14 80.1 67 83.6
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 1.1e-11 72.8 67 73.1
Solyc02g065640.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.1e-11 72.8 67 82.1
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 2.5e-11 71.6 67 74.6
Sopen02g015850 Solanum pennellii HOM05D002873 ORTHO05D002978 3.3e-11 71.2 67 80.6
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 5.6e-11 70.5 67 71.6
Cc00_g21590 Coffea canephora HOM05D002873 ORTHO05D002978 7.4e-11 70.1 67 80.6
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 7.4e-11 70.1 67 65.7
vmacro18088 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 7.4e-11 70.1 67 86.6
Oeu032858.1 Olea europaea HOM05D002873 ORTHO05D002978 1.3e-10 69.3 67 82.1
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 2.1e-10 68.6 67 68.7
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 2.1e-10 68.6 67 74.6
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 2.1e-10 68.6 67 65.7
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 2.8e-10 68.2 67 65.7
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 6.2e-10 67.0 67 55.2
Nitab4.5_0015566g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 6.2e-10 67.0 67 80.6
CSS0045706 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 1.1e-09 66.2 67 76.1
CSS0047860 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 1.1e-09 66.2 67 76.1
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.4e-09 65.9 66 68.2
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 1.4e-09 65.9 66 63.6
CAN.G497.26 Capsicum annuum HOM05D002873 ORTHO05D002978 1.8e-09 65.5 67 82.1
CAN.G497.27 Capsicum annuum HOM05D002873 ORTHO05D002978 1.8e-09 65.5 67 82.1
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 2.4e-09 65.1 67 73.1
Nitab4.5_0012845g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 2.4e-09 65.1 67 76.1
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 2.4e-09 65.1 67 52.2
Cc07_g04790 Coffea canephora HOM05D002873 ORTHO05D002978 3.1e-09 64.7 67 83.6
Oeu049338.1 Olea europaea HOM05D002873 ORTHO05D002978 3.1e-09 64.7 67 80.6
Solyc02g089580.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 3.1e-09 64.7 67 79.1
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 4.0e-09 64.3 66 62.1
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 4.0e-09 64.3 66 56.1
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 4.0e-09 64.3 66 56.1
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 4.0e-09 64.3 66 56.1
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 4.0e-09 64.3 67 55.2
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 4.0e-09 64.3 66 75.8
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 5.3e-09 63.9 66 56.1
Nitab4.5_0001324g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 9.0e-09 63.2 67 80.6
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 1.2e-08 62.8 66 74.2
Sed0018699 Sechium edule HOM05D002873 ORTHO05D002978 1.2e-08 62.8 66 77.3
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 1.2e-08 62.8 67 65.7
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 1.2e-08 62.8 67 52.2
Thhalv10028020m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 1.5e-08 62.4 65 78.5
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 1.5e-08 62.4 66 77.3
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 1.5e-08 62.4 66 54.5
Sabra04G0074500 Salix brachista HOM05D002873 ORTHO05D002978 1.5e-08 62.4 66 75.8
Peaxi162Scf01056g00020 Petunia axillaris HOM05D002873 ORTHO05D002978 2.0e-08 62.0 67 71.6
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 2.0e-08 62.0 66 54.5
Actinidia36291 Actinidia chinensis HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 70.1
vmacro18087 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 80.6
PGSC0003DMG400010052 Solanum tuberosum HOM05D002873 ORTHO05D002978 3.4e-08 61.2 67 77.6
Ca_20748_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 4.5e-08 60.8 65 78.5
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 4.5e-08 60.8 66 69.7
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 4.5e-08 60.8 66 69.7
Migut.K00873 Erythranthe guttata HOM05D002873 ORTHO05D002978 5.8e-08 60.5 67 79.1
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 5.8e-08 60.5 66 71.2
Dinv36852 Davidia involucrata HOM05D002873 ORTHO05D002978 7.6e-08 60.1 65 58.5
PGR042G3018 Punica granatum HOM05D002873 ORTHO05D002978 7.6e-08 60.1 66 75.8
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 1.0e-07 59.7 64 51.6
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 1.0e-07 59.7 66 53.0
Dinv34873 Davidia involucrata HOM05D002873 ORTHO05D002978 1.3e-07 59.3 69 65.2
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 1.3e-07 59.3 67 52.2
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.3e-07 59.3 66 65.2
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 1.7e-07 58.9 66 62.1
Solyc02g089590.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.7e-07 58.9 67 74.6
Hma1.2p1_0588F.1_g184450 Hydrangea macrophylla HOM05D002873 ORTHO05D002978 2.2e-07 58.5 64 71.9
Rhsim08G0081200 Rhododendron simsii HOM05D002873 ORTHO05D002978 2.2e-07 58.5 67 79.1
Thecc.04G146000 Theobroma cacao HOM05D002873 ORTHO05D002978 2.2e-07 58.5 66 75.8
Sopen02g034310 Solanum pennellii HOM05D002873 ORTHO05D002978 2.9e-07 58.2 67 76.1
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 6.5e-07 57.0 66 63.6
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 8.4e-07 56.6 66 48.5
Glyma.19G040000 Glycine max HOM05D002873 ORTHO05D002978 8.4e-07 56.6 61 73.8
Hma1.2p1_0588F.1_g184500 Hydrangea macrophylla HOM05D002873 ORTHO05D002978 8.4e-07 56.6 67 67.2
Nitab4.5_0006224g0060 Nicotiana tabacum HOM05D002873 ORTHO05D002978 8.4e-07 56.6 64 53.1
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 8.4e-07 56.6 64 50.0
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 8.4e-07 56.6 66 56.1
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.1e-06 56.2 66 65.2
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 1.1e-06 56.2 66 53.0
vmacro18089 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 77.6
Aa31LG9G16900 Aethionema arabicum HOM05D002873 ORTHO05D002978 1.4e-06 55.8 65 80.0
Glyma.18G278600 Glycine max HOM05D002873 ORTHO05D002978 1.4e-06 55.8 60 66.7
Peaxi162Scf00479g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 1.4e-06 55.8 67 49.3
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 1.4e-06 55.8 66 47.0
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 47.8
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 1.9e-06 55.5 60 50.0
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 59.1
Dinv38615 Davidia involucrata HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 48.5
Duzib268G0192 Durio zibethinus HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 74.2
Peaxi162Scf00019g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 1.9e-06 55.5 33 84.8
Rhsim08G0081300 Rhododendron simsii HOM05D002873 ORTHO05D002978 1.9e-06 55.5 33 84.8
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 47.0
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 2.5e-06 55.1 65 47.7
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 2.5e-06 55.1 65 47.7
AL3G11800 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 3.2e-06 54.7 66 47.0
Carub.0003s0158 Capsella rubella HOM05D002873 ORTHO05D002978 3.2e-06 54.7 66 47.0
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 4.2e-06 54.3 64 57.8
SalBow1G5754 Salvia bowleyana HOM05D002873 ORTHO05D002978 4.2e-06 54.3 67 76.1
SpUn0185_0020 Schrenkiella parvula HOM05D002873 ORTHO05D002978 4.2e-06 54.3 65 78.5
BcaC01g04444 Brassica carinata HOM05D002873 ORTHO05D002978 5.5e-06 53.9 65 56.9
C03p40070 Brassica napus HOM05D002873 ORTHO05D002978 5.5e-06 53.9 65 56.9
BolC3t16273H Brassica oleracea HOM05D002873 ORTHO05D002978 5.5e-06 53.9 65 56.9
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 5.5e-06 53.9 60 46.7
Sc11g0008060 Simmondsia chinensis HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 62.1
MELO3C005500.2 Cucumis melo HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 63.6
Medtr6g016570 Medicago truncatula HOM05D015498 ORTHO05D015153 7.1e-06 53.5 65 73.8
Sed0007664 Sechium edule HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 77.3
A03p32950 Brassica napus HOM05D002873 ORTHO05D002978 9.3e-06 53.1 65 55.4
BraA03t12463Z Brassica rapa HOM05D002873 ORTHO05D002978 9.3e-06 53.1 65 55.4
FvH4_6g45802 Fragaria vesca HOM05D002873 ORTHO05D002978 9.3e-06 53.1 66 77.3
FAN05G0873 Fragaria x ananassa HOM05D002873 ORTHO05D002978 9.3e-06 53.1 66 77.3


User provided reference genes

Program Settings