Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00971 Erythranthe guttata HOM05D003268 ORTHO05D003719 5.6e-184 647.5 333 100.0
Migut.O00762 Erythranthe guttata HOM05D003268 ORTHO05D003719 2.0e-96 356.7 189 96.3
SalBow4G1159 Salvia bowleyana HOM05D003268 ORTHO05D003719 2.6e-72 276.6 382 48.4
MSTRG.16427 Avicennia marina HOM05D003268 ORTHO05D003719 1.5e-67 260.8 387 45.7
SGA_v2.0_scaffold22G09705 Striga asiatica HOM05D003268 ORTHO05D003719 1.6e-66 257.3 338 49.1
Oeu016542.1 Olea europaea HOM05D003268 ORTHO05D003719 8.3e-55 218.4 381 40.9
Cc02_g35810 Coffea canephora HOM05D003268 ORTHO05D003719 3.2e-54 216.5 350 43.1
Oeu023379.1 Olea europaea HOM05D003268 ORTHO05D003719 1.0e-52 211.5 362 40.3
Oeu023377.1 Olea europaea HOM05D003268 ORTHO05D003719 5.1e-52 209.1 362 40.1
Dinv30944 Davidia involucrata HOM05D003268 ORTHO05D003719 1.2e-50 204.5 292 46.9
Lj5P319T26 Lonicera japonica HOM05D003268 ORTHO05D003719 1.2e-48 198.0 283 44.9
Nitab4.5_0005904g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 2.9e-47 193.4 286 42.3
Hma1.2p1_0759F.1_g213940 Hydrangea macrophylla HOM05D003268 ORTHO05D003719 1.4e-46 191.0 269 44.6
Nitab4.5_0002485g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 9.2e-46 188.3 326 39.6
Solyc01g101160.2 Solanum lycopersicum HOM05D003268 ORTHO05D003719 1.6e-45 187.6 290 44.5
Sopen01g044640 Solanum pennellii HOM05D003268 ORTHO05D003719 1.6e-45 187.6 290 44.5
PGSC0003DMG400044126 Solanum tuberosum HOM05D003268 ORTHO05D003719 3.5e-45 186.4 320 40.3
CAN.G1248.20 Capsicum annuum HOM05D003268 ORTHO05D003719 6.0e-45 185.7 312 40.1
CSS0047817 Camellia sinensis var. sinensis HOM05D003268 ORTHO05D003719 1.7e-44 184.1 253 45.1
Rhsim11G0103200 Rhododendron simsii HOM05D003268 ORTHO05D003719 4.0e-41 172.9 278 40.6
vmacro01600 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 7.1e-38 162.2 280 38.6
unitig_8.g4507 Utricularia gibba HOM05D003268 ORTHO05D003719 1.6e-37 161.0 261 39.5
Migut.B00880 Erythranthe guttata HOM05D003268 ORTHO05D003719 3.5e-37 159.8 208 47.1
Actinidia11688 Actinidia chinensis HOM05D003268 ORTHO05D003719 5.1e-36 156.0 276 42.4
ECA240G0886 Erigeron canadensis HOM05D003268 ORTHO05D003719 1.8e-33 147.5 253 41.5
HanXRQChr09g0248281 Helianthus annuus HOM05D003268 ORTHO05D003719 2.9e-31 140.2 294 38.1
HanXRQChr09g0250221 Helianthus annuus HOM05D003268 ORTHO05D003719 3.8e-31 139.8 285 39.3
DCAR_001893 Daucus carota HOM05D003268 ORTHO05D003719 5.4e-30 136.0 273 35.2
Cpa.g.sc48.222 Carica papaya HOM05D003268 ORTHO05D003719 2.7e-29 133.7 180 43.3
ClCG03G017870 Citrullus lanatus HOM05D003268 ORTHO05D003719 1.3e-28 131.3 311 33.8
MBI19_g47476_MAGBIO Magnolia biondii HOM05D003268 ORTHO05D003719 1.3e-28 131.3 193 39.9
TWI56G0501 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 3.0e-28 130.2 201 41.8
Manes.08G107700 Manihot esculenta HOM05D003268 ORTHO05D003719 5.1e-28 129.4 307 32.6
COL.COLO4_34517 Corchorus olitorius HOM05D003268 ORTHO05D003719 6.6e-28 129.0 197 40.1
Sc16g0009390 Simmondsia chinensis HOM05D003268 ORTHO05D003719 8.7e-28 128.6 227 37.4
TAR633G0292 Trochodendron aralioides HOM05D003268 ORTHO05D003719 1.1e-27 128.3 255 35.7
Ciclev10005819m.g Citrus clementina HOM05D003268 ORTHO05D003719 1.9e-27 127.5 209 38.8
Dinv29508 Davidia involucrata HOM05D003268 ORTHO05D003719 2.5e-27 127.1 191 41.9
Sed0007403 Sechium edule HOM05D003268 ORTHO05D003719 4.3e-27 126.3 336 32.4
Duzib212G0032 Durio zibethinus HOM05D003268 ORTHO05D003719 7.3e-27 125.6 191 41.9
QL06p014213 Quercus lobata HOM05D003268 ORTHO05D003719 9.6e-27 125.2 199 41.2
TAR636G0250 Trochodendron aralioides HOM05D003268 ORTHO05D003719 9.6e-27 125.2 260 37.7
Atru.chr4.3150 Acer truncatum HOM05D003268 ORTHO05D003719 1.3e-26 124.8 181 41.4
CANSAT54G2527 Cannabis sativa HOM05D003268 ORTHO05D003719 1.3e-26 124.8 217 41.0
Gohir.D02G064200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.6e-26 124.4 204 38.2
Gorai.005G072500 Gossypium raimondii HOM05D003268 ORTHO05D003719 1.6e-26 124.4 204 38.2
Manes.11G020800 Manihot esculenta HOM05D003268 ORTHO05D003719 2.1e-26 124.0 184 42.9
PGR031G0843 Punica granatum HOM05D003268 ORTHO05D003719 2.1e-26 124.0 270 35.6
Thecc.04G313000 Theobroma cacao HOM05D003268 ORTHO05D003719 3.6e-26 123.2 214 38.3
Cpa.g.sc53.77 Carica papaya HOM05D003268 ORTHO05D003719 4.8e-26 122.9 187 40.1
Gohir.A02G058400 Gossypium hirsutum HOM05D003268 ORTHO05D003719 8.1e-26 122.1 204 38.2
C05p07520 Brassica napus HOM05D003268 ORTHO05D003719 1.2e-24 118.2 194 39.7
BolC5t29506H Brassica oleracea HOM05D003268 ORTHO05D003719 1.2e-24 118.2 194 39.7
COL.COLO4_05489 Corchorus olitorius HOM05D003268 ORTHO05D003719 1.2e-24 118.2 199 36.7
Gohir.A13G177600 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.2e-24 118.2 187 40.1
A06p06210 Brassica napus HOM05D003268 ORTHO05D003719 2.6e-24 117.1 194 38.7
BraA06t23832Z Brassica rapa HOM05D003268 ORTHO05D003719 2.6e-24 117.1 194 38.7
CsaV3_1G038030 Cucumis sativus L. HOM05D003268 ORTHO05D003719 2.6e-24 117.1 309 31.4
MELO3C015242.2 Cucumis melo HOM05D003268 ORTHO05D003719 4.5e-24 116.3 292 32.2
Gohir.D13G184200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 4.5e-24 116.3 187 39.6
Gorai.013G209800 Gossypium raimondii HOM05D003268 ORTHO05D003719 4.5e-24 116.3 187 39.6
CARHR009490 Cardamine hirsuta HOM05D003268 ORTHO05D003719 5.8e-24 115.9 193 40.9
Haze_03993 Corylus avellana HOM05D003268 ORTHO05D003719 5.8e-24 115.9 249 35.3
THA.LOC104816841 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 9.9e-24 115.2 192 39.1
TAR362G1252 Trochodendron aralioides HOM05D003268 ORTHO05D003719 9.9e-24 115.2 324 33.3
AL1G20040 Arabidopsis lyrata HOM05D003268 ORTHO05D003719 1.7e-23 114.4 194 39.2
MD13G1139400 Malus domestica HOM05D003268 ORTHO05D003719 2.2e-23 114.0 215 40.0
Glyma.17G041900 Glycine max HOM05D003268 ORTHO05D003719 4.9e-23 112.8 200 35.5
Lj6P701T18 Lonicera japonica HOM05D003268 ORTHO05D003719 6.4e-23 112.5 192 38.0
THA.LOC104820490 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 6.4e-23 112.5 200 38.0
CiPaw.07G035600 Carya illinoinensis HOM05D003268 ORTHO05D003719 8.4e-23 112.1 253 32.4
Potri.010G002200 Populus trichocarpa HOM05D003268 ORTHO05D003719 1.1e-22 111.7 187 40.1
A08p34520 Brassica napus HOM05D003268 ORTHO05D003719 2.4e-22 110.5 193 39.4
Ah.10g026900 Amaranthus hybridus HOM05D003268 ORTHO05D003719 3.2e-22 110.2 234 32.1
Glyma.13G118100 Glycine max HOM05D003268 ORTHO05D003719 3.2e-22 110.2 189 35.4
TWI09G0361 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 3.2e-22 110.2 187 38.0
Aa31LG1G5560 Aethionema arabicum HOM05D003268 ORTHO05D003719 7.1e-22 109.0 224 33.9
Carub.0001s0886 Capsella rubella HOM05D003268 ORTHO05D003719 7.1e-22 109.0 184 39.7
BraA08t35363Z Brassica rapa HOM05D003268 ORTHO05D003719 9.3e-22 108.6 196 37.2
QL03p010269 Quercus lobata HOM05D003268 ORTHO05D003719 9.3e-22 108.6 173 39.9
QL03p010503 Quercus lobata HOM05D003268 ORTHO05D003719 9.3e-22 108.6 173 39.9
Sabra10G0001700 Salix brachista HOM05D003268 ORTHO05D003719 9.3e-22 108.6 182 40.7
Duzib128G0788 Durio zibethinus HOM05D003268 ORTHO05D003719 1.6e-21 107.8 198 36.9
MD16G1136300 Malus domestica HOM05D003268 ORTHO05D003719 2.1e-21 107.5 210 38.6
Medtr1g484850 Medicago truncatula HOM05D003268 ORTHO05D003719 2.1e-21 107.5 220 33.2
ECA234G2755 Erigeron canadensis HOM05D003268 ORTHO05D003719 2.7e-21 107.1 187 36.9
A09p65470 Brassica napus HOM05D003268 ORTHO05D003719 4.6e-21 106.3 192 36.5
BraA09t41892Z Brassica rapa HOM05D003268 ORTHO05D003719 4.6e-21 106.3 192 36.5
BolC8t48925H Brassica oleracea HOM05D003268 ORTHO05D003719 6.0e-21 105.9 195 37.9
Lalb_Chr02g0147571 Lupinus albus HOM05D003268 ORTHO05D003719 6.0e-21 105.9 194 36.1
Sp1g08120 Schrenkiella parvula HOM05D003268 ORTHO05D003719 6.0e-21 105.9 194 36.1
C08p49440 Brassica napus HOM05D003268 ORTHO05D003719 7.9e-21 105.5 185 37.8
FvH4_6g08440 Fragaria vesca HOM05D003268 ORTHO05D003719 1.8e-20 104.4 204 34.3
FAN14G0797 Fragaria x ananassa HOM05D003268 ORTHO05D003719 1.8e-20 104.4 204 34.3
Ciclev10013870m.g Citrus clementina HOM05D003268 ORTHO05D003719 3.9e-20 103.2 171 36.8
Thecc.05G329300 Theobroma cacao HOM05D003268 ORTHO05D003719 3.9e-20 103.2 187 36.9
Psat6g155480 Pisum sativum HOM05D003268 ORTHO05D003719 5.1e-20 102.8 223 35.9
Oeu020279.1 Olea europaea HOM05D003268 ORTHO05D003719 8.7e-20 102.1 186 38.2
PSO761G0464 Papaver somniferum HOM05D003268 ORTHO05D003719 1.1e-19 101.7 194 35.6
unitig_578.g15945 Utricularia gibba HOM05D003268 ORTHO05D003719 1.1e-19 101.7 97 54.6
AT1G09520 Arabidopsis thaliana HOM05D003268 ORTHO05D003719 1.5e-19 101.3 193 37.8
BcaC07g38514 Brassica carinata HOM05D003268 ORTHO05D003719 1.9e-19 100.9 173 39.9
RcHm_v2.0_Chr4g0427521 Rosa chinensis HOM05D003268 ORTHO05D003719 2.5e-19 100.5 187 41.2
HanXRQChr10g0294291 Helianthus annuus HOM05D003268 ORTHO05D003719 3.3e-19 100.1 189 37.6
Ca_10197_v3 Cicer arietinum L. HOM05D003268 ORTHO05D003719 4.3e-19 99.8 243 32.9
PSO170G4270 Papaver somniferum HOM05D003268 ORTHO05D003719 4.3e-19 99.8 183 36.6
SHI00050 Sapria himalayana HOM05D002272 ORTHO05D005405 4.3e-19 99.8 187 34.8
C08p12950 Brassica napus HOM05D003268 ORTHO05D003719 5.6e-19 99.4 192 34.4
Haze_00767 Corylus avellana HOM05D003268 ORTHO05D003719 5.6e-19 99.4 202 35.1
PSO210G7784 Papaver somniferum HOM05D003268 ORTHO05D003719 5.6e-19 99.4 194 35.6
FAN02G3445 Fragaria x ananassa HOM05D003268 ORTHO05D003719 7.4e-19 99.0 171 37.4
Thhalv10008580m.g Eutrema salsugineum HOM05D003268 ORTHO05D003719 1.6e-18 97.8 259 29.7
Atru.chr12.1545 Acer truncatum HOM05D003268 ORTHO05D003719 2.1e-18 97.4 182 39.0
ATR0796G330 Amborella trichopoda HOM05D003268 ORTHO05D003719 2.1e-18 97.4 227 33.5
Aa31LG8G4410 Aethionema arabicum HOM05D002272 ORTHO05D005405 3.7e-18 96.7 191 36.6
Oeu034985.1 Olea europaea HOM05D003268 ORTHO05D003719 3.7e-18 96.7 183 37.2
MELO3C006751.2 Cucumis melo HOM05D003268 ORTHO05D003719 4.8e-18 96.3 188 34.0
Lj5g0018140 Lotus japonicus HOM05D003268 ORTHO05D003719 4.8e-18 96.3 193 32.6
Lalb_Chr13g0299031 Lupinus albus HOM05D003268 ORTHO05D003719 8.1e-18 95.5 190 34.2
RcHm_v2.0_Chr3g0458411 Rosa chinensis HOM05D003268 ORTHO05D003719 8.1e-18 95.5 184 34.8
SalBow5G1243 Salvia bowleyana HOM05D003268 ORTHO05D003719 1.1e-17 95.1 189 34.9
THA.LOC104821812 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 1.1e-17 95.1 203 33.0
C08p00580 Brassica napus HOM05D003268 ORTHO05D003719 1.4e-17 94.7 168 38.7
Migut.B00893 Erythranthe guttata HOM05D003268 ORTHO05D003719 1.8e-17 94.4 200 33.0
VMungo1215G0793 Vigna mungo HOM05D003268 ORTHO05D003719 2.4e-17 94.0 202 32.2
BraA08t35364Z Brassica rapa HOM05D003268 ORTHO05D003719 4.0e-17 93.2 170 38.2
Sabra08G0150300 Salix brachista HOM05D003268 ORTHO05D003719 9.0e-17 92.0 142 40.8
Glyma.10G143800 Glycine max HOM05D003268 ORTHO05D003719 1.2e-16 91.7 190 33.2
Aqoxy2G02513 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 1.5e-16 91.3 209 32.1
Sp3g15630 Schrenkiella parvula HOM05D003268 ORTHO05D003719 2.0e-16 90.9 188 33.5
CiPaw.01G129300 Carya illinoinensis HOM05D003268 ORTHO05D003719 2.6e-16 90.5 209 33.5
Thhalv10022081m.g Eutrema salsugineum HOM05D003268 ORTHO05D003719 2.6e-16 90.5 199 33.7
Lalb_Chr07g0181591 Lupinus albus HOM05D003268 ORTHO05D003719 4.5e-16 89.7 202 33.2
Potri.008G206600 Populus trichocarpa HOM05D003268 ORTHO05D003719 4.5e-16 89.7 142 40.1
Actinidia17741 Actinidia chinensis HOM05D003268 ORTHO05D003719 5.8e-16 89.4 287 33.8
Dinv24510 Davidia involucrata HOM05D003268 ORTHO05D003719 5.8e-16 89.4 162 39.5
FAN09G1400 Fragaria x ananassa HOM05D003268 ORTHO05D003719 5.8e-16 89.4 198 34.3
MSTRG.20352 Avicennia marina HOM05D003268 ORTHO05D003719 1.0e-15 88.6 180 33.3
TPR.G2590 Trifolium pratense HOM05D003268 ORTHO05D003719 1.0e-15 88.6 176 33.5
Lalb_Chr06g0167311 Lupinus albus HOM05D003268 ORTHO05D003719 2.9e-15 87.0 240 29.6
Phvul.003G123200 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 2.9e-15 87.0 203 32.0
Phvul.007G204700 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 4.9e-15 86.3 196 32.1
Glyma.20G092502 Glycine max HOM05D003268 ORTHO05D003719 1.9e-14 84.3 208 31.7
Aqoxy5G02799 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 2.5e-14 84.0 196 29.6
HPP92_012769 Vanilla planifolia HOM05D003268 ORTHO05D003719 2.5e-14 84.0 174 34.5
Migut.B00879 Erythranthe guttata HOM05D003268 ORTHO05D003719 3.2e-14 83.6 250 31.2
A08p34530 Brassica napus HOM05D003268 ORTHO05D003719 4.2e-14 83.2 170 36.5
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 5.5e-14 82.8 264 29.5
VMungo0720G1780 Vigna mungo HOM05D003268 ORTHO05D003719 7.1e-14 82.4 196 30.6
Sed0010166 Sechium edule HOM05D003268 ORTHO05D003719 9.3e-14 82.0 184 32.6
BcaC09g48702 Brassica carinata HOM05D003268 ORTHO05D003719 1.6e-13 81.3 204 33.3
C01p46780 Brassica napus HOM05D003268 ORTHO05D003719 1.6e-13 81.3 204 33.3
BolC1t04651H Brassica oleracea HOM05D003268 ORTHO05D003719 1.6e-13 81.3 204 33.3
Nitab4.5_0001808g0030 Nicotiana tabacum HOM05D003268 ORTHO05D003719 3.5e-13 80.1 184 34.2
Solyc03g114270.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 3.5e-13 80.1 186 31.7
Sopen03g033360 Solanum pennellii HOM05D003268 ORTHO05D003796 3.5e-13 80.1 186 31.7
BcaC05g28789 Brassica carinata HOM05D003268 ORTHO05D003719 4.6e-13 79.7 190 34.2
Prupe.1G105300 Prunus persica HOM05D003268 ORTHO05D003719 6.0e-13 79.3 212 33.5
SEGI_18442 Sequoiadendron giganteum HOM05D003268 ORTHO05D003719 1.0e-12 78.6 203 29.6
PGSC0003DMG400044873 Solanum tuberosum HOM05D003268 ORTHO05D003719 1.3e-12 78.2 177 32.8
Sopen10g005750 Solanum pennellii HOM05D003268 ORTHO05D003719 2.3e-12 77.4 169 33.1
BcaC09g48706 Brassica carinata HOM05D003268 ORTHO05D003719 3.0e-12 77.0 181 33.1
BolC1t04640H Brassica oleracea HOM05D003268 ORTHO05D003719 3.0e-12 77.0 181 33.1
vmacro22837 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 3.0e-12 77.0 197 29.9
A01p36890 Brassica napus HOM05D003268 ORTHO05D003719 3.9e-12 76.6 201 33.3
Solyc10g011990.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 3.9e-12 76.6 169 33.1
C05p48980 Brassica napus HOM05D003268 ORTHO05D003719 5.1e-12 76.3 190 33.2
BolC5t33638H Brassica oleracea HOM05D003268 ORTHO05D003719 5.1e-12 76.3 190 33.2
Cfa015729 Carpinus fangiana HOM05D003268 ORTHO05D003719 1.5e-11 74.7 202 29.7
Nitab4.5_0000039g0190 Nicotiana tabacum HOM05D003268 ORTHO05D003719 1.5e-11 74.7 184 33.2
PGSC0003DMG401019388 Solanum tuberosum HOM05D003268 ORTHO05D003719 1.5e-11 74.7 169 33.7
BcaB04g20839 Brassica carinata HOM05D003268 ORTHO05D003719 3.3e-11 73.6 181 31.5
BraA01t03748Z Brassica rapa HOM05D003268 ORTHO05D003719 4.3e-11 73.2 201 32.3
Ca_21366_v3 Cicer arietinum L. HOM05D003268 ORTHO05D003719 5.7e-11 72.8 191 28.8
BcaB06g25842 Brassica carinata HOM05D003268 ORTHO05D003719 1.3e-10 71.6 193 30.1
CsaV3_3G015530 Cucumis sativus L. HOM05D003268 ORTHO05D003719 1.6e-10 71.2 188 31.9
Carub.0003s1718 Capsella rubella HOM05D003268 ORTHO05D003719 3.7e-10 70.1 192 29.7
Psat0s1206g0240 Pisum sativum HOM05D003268 ORTHO05D003719 3.7e-10 70.1 187 29.9
Lsat_1_v5_gn_9_82161 Lactuca sativa HOM05D050257 ORTHO05D003719 6.2e-10 69.3 187 28.3
TPR.G12613 Trifolium pratense HOM05D003268 ORTHO05D003719 6.2e-10 69.3 187 28.9
FAN05G0723 Fragaria x ananassa HOM05D003268 ORTHO05D003719 5.3e-09 66.2 82 41.5
CARHR092780 Cardamine hirsuta HOM05D003268 ORTHO05D003719 6.9e-09 65.9 192 28.1
Peaxi162Scf00357g00013 Petunia axillaris HOM05D003268 ORTHO05D003719 9.0e-09 65.5 137 38.7
Medtr4g124100 Medicago truncatula HOM05D003268 ORTHO05D003719 1.5e-08 64.7 169 29.6
Os05g0277200 Oryza sativa ssp. japonica HOM05D003268 ORTHO05D003719 7.6e-08 62.4 231 27.3
AL3G30540 Arabidopsis lyrata HOM05D003268 ORTHO05D003719 1.1e-06 58.5 188 28.7
unitig_578.g15944 Utricularia gibba HOM05D003268 ORTHO05D003719 9.3e-06 55.5 191 28.8


User provided reference genes

Program Settings