Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00805 Erythranthe guttata HOM05D000401 ORTHO05D000252 1.7e-54 215.7 102 100.0
Migut.L01818 Erythranthe guttata HOM05D000401 ORTHO05D000252 1.4e-13 79.7 88 48.9
Peaxi162Scf00419g00061 Petunia axillaris HOM05D000401 ORTHO05D000252 4.6e-12 74.7 90 45.6
Duzib093G1461 Durio zibethinus HOM05D000401 ORTHO05D000252 8.6e-11 70.5 80 45.0
Oeu020326.1 Olea europaea HOM05D000401 ORTHO05D000252 1.5e-10 69.7 70 47.1
MSTRG.10392 Avicennia marina HOM05D000401 ORTHO05D000252 3.3e-10 68.6 92 41.3
Glyma.03G200200 Glycine max HOM05D000401 ORTHO05D000252 4.3e-10 68.2 89 40.4
Nitab4.5_0000665g0030 Nicotiana tabacum HOM05D000401 ORTHO05D000252 4.3e-10 68.2 93 44.1
Ciclev10013812m.g Citrus clementina HOM05D000401 ORTHO05D000252 5.6e-10 67.8 46 67.4
Manes.09G048700 Manihot esculenta HOM05D000401 ORTHO05D000252 5.6e-10 67.8 80 42.5
DCAR_020721 Daucus carota HOM05D000401 ORTHO05D000252 7.3e-10 67.4 69 46.4
Cc06_g06340 Coffea canephora HOM05D000401 ORTHO05D000252 9.5e-10 67.0 46 65.2
Lj1g0008900 Lotus japonicus HOM05D000401 ORTHO05D000252 9.5e-10 67.0 46 63.0
Potri.016G072800 Populus trichocarpa HOM05D000401 ORTHO05D000252 9.5e-10 67.0 80 42.5
Solyc01g007800.3 Solanum lycopersicum HOM05D000401 ORTHO05D000252 9.5e-10 67.0 46 65.2
Sopen01g003340 Solanum pennellii HOM05D000401 ORTHO05D000252 9.5e-10 67.0 46 65.2
PGSC0003DMG400016415 Solanum tuberosum HOM05D000401 ORTHO05D000252 9.5e-10 67.0 46 65.2
Migut.J00682 Erythranthe guttata HOM05D000401 ORTHO05D000252 1.2e-09 66.6 78 43.6
SGA_v2.0_scaffold13G06666 Striga asiatica HOM05D000401 ORTHO05D000252 1.2e-09 66.6 84 40.5
CSS0001051 Camellia sinensis var. sinensis HOM05D000401 ORTHO05D000252 1.6e-09 66.2 46 63.0
MSTRG.26611 Avicennia marina HOM05D000401 ORTHO05D000252 2.1e-09 65.9 46 63.0
CAN.G574.37 Capsicum annuum HOM05D000401 ORTHO05D000252 2.1e-09 65.9 46 63.0
Dinv12321 Davidia involucrata HOM05D000401 ORTHO05D000252 2.1e-09 65.9 46 63.0
Hma1.2p1_1442F.1_g283810 Hydrangea macrophylla HOM05D000401 ORTHO05D000252 2.1e-09 65.9 46 63.0
Sabra16G0075700 Salix brachista HOM05D000401 ORTHO05D000252 2.1e-09 65.9 80 42.5
Actinidia32059 Actinidia chinensis HOM05D000401 ORTHO05D000252 2.8e-09 65.5 46 63.0
Rhsim03G0067200 Rhododendron simsii HOM05D000401 ORTHO05D000252 3.6e-09 65.1 46 63.0
Cfa016667 Carpinus fangiana HOM05D000401 ORTHO05D000252 4.7e-09 64.7 84 38.1
Lalb_Chr25g0288101 Lupinus albus HOM05D000401 ORTHO05D000252 4.7e-09 64.7 46 58.7
Medtr0907s0020 Medicago truncatula HOM05D000401 ORTHO05D000252 4.7e-09 64.7 60 50.0
PSO339G1260 Papaver somniferum HOM05D000401 ORTHO05D000252 4.7e-09 64.7 83 41.0
SalBow5G1925 Salvia bowleyana HOM05D000401 ORTHO05D000252 4.7e-09 64.7 46 63.0
Duzib106G1070 Durio zibethinus HOM05D000401 ORTHO05D000252 6.2e-09 64.3 46 60.9
Gohir.A04G061400 Gossypium hirsutum HOM05D000401 ORTHO05D000252 6.2e-09 64.3 46 60.9
Gohir.A09G136900 Gossypium hirsutum HOM05D000401 ORTHO05D000252 6.2e-09 64.3 46 60.9
Gohir.D04G095400 Gossypium hirsutum HOM05D000401 ORTHO05D000252 6.2e-09 64.3 46 60.9
Gohir.D09G132300 Gossypium hirsutum HOM05D000401 ORTHO05D000252 6.2e-09 64.3 46 60.9
Gorai.006G150900 Gossypium raimondii HOM05D000401 ORTHO05D000252 6.2e-09 64.3 46 60.9
Gorai.009G398100 Gossypium raimondii HOM05D000401 ORTHO05D000252 6.2e-09 64.3 46 60.9
Oeu028655.1 Olea europaea HOM05D000401 ORTHO05D000252 6.2e-09 64.3 46 60.9
SGA_v2.0_scaffold31G12875 Striga asiatica HOM05D000401 ORTHO05D000252 6.2e-09 64.3 46 60.9
Thecc.05G100600 Theobroma cacao HOM05D000401 ORTHO05D000252 6.2e-09 64.3 46 60.9
Gohir.A01G202600 Gossypium hirsutum HOM05D000401 ORTHO05D000252 8.0e-09 63.9 44 61.4
Gohir.D01G192600 Gossypium hirsutum HOM05D000401 ORTHO05D000252 8.0e-09 63.9 44 61.4
Gorai.002G236400 Gossypium raimondii HOM05D000401 ORTHO05D000252 8.0e-09 63.9 44 61.4
Nitab4.5_0000020g0380 Nicotiana tabacum HOM05D000401 ORTHO05D000252 8.0e-09 63.9 46 60.9
PSO384G2262 Papaver somniferum HOM05D000401 ORTHO05D000252 8.0e-09 63.9 83 41.0
Haze_19678 Corylus avellana HOM05D000401 ORTHO05D000252 1.1e-08 63.5 79 39.2
Hma1.2p1_0064F.1_g034860 Hydrangea macrophylla HOM05D000401 ORTHO05D000252 1.1e-08 63.5 46 60.9
Potri.006G205400 Populus trichocarpa HOM05D000401 ORTHO05D000252 1.1e-08 63.5 83 43.4
Sopen10g032560 Solanum pennellii HOM05D000401 ORTHO05D000252 1.1e-08 63.5 46 58.7
Gohir.A01G137708 Gossypium hirsutum HOM05D000401 ORTHO05D000252 1.4e-08 63.2 46 60.9
Gohir.D01G126800 Gossypium hirsutum HOM05D000401 ORTHO05D000252 1.4e-08 63.2 46 60.9
Oeu017710.1 Olea europaea HOM05D000401 ORTHO05D000252 1.4e-08 63.2 44 61.4
Oeu017713.1 Olea europaea HOM05D000401 ORTHO05D000252 1.4e-08 63.2 44 61.4
Solyc10g082050.1 Solanum lycopersicum HOM05D000401 ORTHO05D000252 1.4e-08 63.2 46 58.7
Atru.chr8.1398 Acer truncatum HOM05D000401 ORTHO05D000252 1.8e-08 62.8 46 58.7
CSS0026016 Camellia sinensis var. sinensis HOM05D000401 ORTHO05D000252 1.8e-08 62.8 46 58.7
Ca_11720_v3 Cicer arietinum L. HOM05D000401 ORTHO05D000252 1.8e-08 62.8 46 58.7
MD14G1035700 Malus domestica HOM05D000401 ORTHO05D000252 1.8e-08 62.8 77 42.9
TPR.G8731 Trifolium pratense HOM05D000401 ORTHO05D000252 1.8e-08 62.8 46 58.7
CANSAT64G0615 Cannabis sativa HOM05D000401 ORTHO05D000252 2.3e-08 62.4 46 58.7
COL.COLO4_29617 Corchorus olitorius HOM05D000401 ORTHO05D000252 2.3e-08 62.4 46 58.7
Lalb_Chr20g0111481 Lupinus albus HOM05D000401 ORTHO05D000252 2.3e-08 62.4 46 58.7
Sabra06G0158400 Salix brachista HOM05D000401 ORTHO05D000252 2.3e-08 62.4 46 58.7
PGSC0003DMG400028155 Solanum tuberosum HOM05D000401 ORTHO05D000252 2.3e-08 62.4 87 37.9
THA.LOC104826811 Tarenaya hassleriana HOM05D000401 ORTHO05D000252 3.1e-08 62.0 46 56.5
TWI53G0019 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 3.1e-08 62.0 46 60.9
Glyma.19G197800 Glycine max HOM05D000401 ORTHO05D000252 4.0e-08 61.6 46 56.5
Manes.08G031200 Manihot esculenta HOM05D000401 ORTHO05D000252 4.0e-08 61.6 46 56.5
TWI74G0377 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 4.0e-08 61.6 46 58.7
TAR623G1614 Trochodendron aralioides HOM05D000401 ORTHO05D000252 4.0e-08 61.6 81 42.0
unitig_8.g4298 Utricularia gibba HOM05D000401 ORTHO05D000252 4.0e-08 61.6 86 38.4
CAN.G598.1 Capsicum annuum HOM05D000401 ORTHO05D000252 5.2e-08 61.2 42 59.5
Oeu009306.1 Olea europaea HOM05D000401 ORTHO05D000252 5.2e-08 61.2 67 44.8
VMungo0720G2229 Vigna mungo HOM05D000401 ORTHO05D000252 5.2e-08 61.2 46 56.5
FvH4_6g19871 Fragaria vesca HOM05D000401 ORTHO05D000252 6.8e-08 60.8 46 58.7
FAN05G5547 Fragaria x ananassa HOM05D000401 ORTHO05D000252 6.8e-08 60.8 46 58.7
FAN05G5747 Fragaria x ananassa HOM05D000401 ORTHO05D000252 6.8e-08 60.8 46 58.7
FAN09G2763 Fragaria x ananassa HOM05D000401 ORTHO05D000252 6.8e-08 60.8 46 58.7
FAN14G5813 Fragaria x ananassa HOM05D012971 ORTHO05D000252 6.8e-08 60.8 46 58.7
Medtr7g105790 Medicago truncatula HOM05D000401 ORTHO05D000252 6.8e-08 60.8 46 56.5
Psat6g083040 Pisum sativum HOM05D000401 ORTHO05D000252 6.8e-08 60.8 58 50.0
QL01p011633 Quercus lobata HOM05D000401 ORTHO05D000252 6.8e-08 60.8 56 46.4
RcHm_v2.0_Chr3g0475301 Rosa chinensis HOM05D000401 ORTHO05D000252 6.8e-08 60.8 46 58.7
TPR.G39816 Trifolium pratense HOM05D000401 ORTHO05D000252 6.8e-08 60.8 46 56.5
unitig_22.g5138 Utricularia gibba HOM05D000401 ORTHO05D000252 6.8e-08 60.8 55 49.1
Ca_09040_v3 Cicer arietinum L. HOM05D000401 ORTHO05D000252 8.9e-08 60.5 46 56.5
Haze_23332 Corylus avellana HOM05D000401 ORTHO05D000252 8.9e-08 60.5 84 36.9
FAN02G1920 Fragaria x ananassa HOM05D000401 ORTHO05D000252 8.9e-08 60.5 46 58.7
Gorai.002G157300 Gossypium raimondii HOM05D000401 ORTHO05D000252 8.9e-08 60.5 46 58.7
Prupe.7G098400 Prunus persica HOM05D000401 ORTHO05D000252 8.9e-08 60.5 46 56.5
QL01p011376 Quercus lobata HOM05D000401 ORTHO05D000252 8.9e-08 60.5 56 46.4
THA.LOC104809961 Tarenaya hassleriana HOM05D000401 ORTHO05D000252 8.9e-08 60.5 46 56.5
CiPaw.09G018600 Carya illinoinensis HOM05D000401 ORTHO05D000252 1.2e-07 60.1 42 59.5
Lj5g0006620 Lotus japonicus HOM05D000401 ORTHO05D000252 1.2e-07 60.1 55 52.7
Phvul.007G269800 Phaseolus vulgaris HOM05D000401 ORTHO05D000252 1.2e-07 60.1 46 54.3
DCAR_013429 Daucus carota HOM05D000401 ORTHO05D000252 1.5e-07 59.7 44 56.8
ECA233G4117 Erigeron canadensis HOM05D000401 ORTHO05D000252 1.5e-07 59.7 46 54.3
Psat3g030280 Pisum sativum HOM05D000401 ORTHO05D000252 1.5e-07 59.7 44 56.8
PGR004G2527 Punica granatum HOM05D000401 ORTHO05D000252 1.5e-07 59.7 57 43.9
Nitab4.5_0009761g0010 Nicotiana tabacum HOM05D000401 ORTHO05D000252 2.0e-07 59.3 46 54.3
BcaB02g09389 Brassica carinata HOM05D000401 ORTHO05D000252 2.6e-07 58.9 41 58.5
BcaB06g28910 Brassica carinata HOM05D000401 ORTHO05D000252 2.6e-07 58.9 41 58.5
BcaC02g11704 Brassica carinata HOM05D000401 ORTHO05D000252 2.6e-07 58.9 41 58.5
A04p27600 Brassica napus HOM05D000401 ORTHO05D000252 2.6e-07 58.9 41 58.5
A05p09790 Brassica napus HOM05D000401 ORTHO05D000252 2.6e-07 58.9 41 58.5
C04p12150 Brassica napus HOM05D000401 ORTHO05D000252 2.6e-07 58.9 41 58.5
C04p65100 Brassica napus HOM05D000401 ORTHO05D000252 2.6e-07 58.9 41 58.5
BolC4t22859H Brassica oleracea HOM05D000401 ORTHO05D000252 2.6e-07 58.9 41 58.5
BraA04t18255Z Brassica rapa HOM05D000401 ORTHO05D000252 2.6e-07 58.9 41 58.5
BraA05t19931Z Brassica rapa HOM05D000401 ORTHO05D000252 2.6e-07 58.9 41 58.5
HanXRQChr02g0053811 Helianthus annuus HOM05D000401 ORTHO05D000252 2.6e-07 58.9 44 54.5
HanXRQChr13g0398191 Helianthus annuus HOM05D000401 ORTHO05D000252 2.6e-07 58.9 46 54.3
Phvul.001G194020 Phaseolus vulgaris HOM05D000401 ORTHO05D000252 3.4e-07 58.5 46 52.2
Sc20g0006610 Simmondsia chinensis HOM05D000401 ORTHO05D000252 3.4e-07 58.5 47 53.2
VMungo1383G2057 Vigna mungo HOM05D000401 ORTHO05D000252 3.4e-07 58.5 46 52.2
Glyma.02G199300 Glycine max HOM05D000401 ORTHO05D000252 4.4e-07 58.2 45 55.6
unitig_26.g9143 Utricularia gibba HOM05D000401 ORTHO05D000252 4.4e-07 58.2 44 54.5
CiPaw.10G015200 Carya illinoinensis HOM05D000401 ORTHO05D000252 5.8e-07 57.8 42 57.1
ClCG04G010340 Citrullus lanatus HOM05D000401 ORTHO05D000252 7.5e-07 57.4 46 52.2
MELO3C024574.2 Cucumis melo HOM05D000401 ORTHO05D000252 7.5e-07 57.4 46 52.2
CsaV3_6G040960 Cucumis sativus L. HOM05D000401 ORTHO05D000252 7.5e-07 57.4 46 52.2
SGA_v2.0_scaffold184G40007 Striga asiatica HOM05D000401 ORTHO05D000252 7.5e-07 57.4 44 54.5
BcaC02g07637 Brassica carinata HOM05D000401 ORTHO05D000252 9.8e-07 57.0 41 56.1
BolC4t27988H Brassica oleracea HOM05D000401 ORTHO05D000252 9.8e-07 57.0 41 56.1
Carub.0004s1778 Capsella rubella HOM05D000401 ORTHO05D000252 9.8e-07 57.0 41 56.1
CARHR130290 Cardamine hirsuta HOM05D000401 ORTHO05D000252 9.8e-07 57.0 41 56.1
Ciclev10030088m.g Citrus clementina HOM05D000401 ORTHO05D000252 9.8e-07 57.0 42 57.1
Thhalv10017772m.g Eutrema salsugineum HOM05D000401 ORTHO05D000252 9.8e-07 57.0 41 56.1
Ah.08g210190 Amaranthus hybridus HOM05D000401 ORTHO05D000252 1.3e-06 56.6 46 50.0
Aqoxy4G02686 Aquilegia oxysepala HOM05D000401 ORTHO05D000252 1.3e-06 56.6 42 57.1
Cfa009971 Carpinus fangiana HOM05D000401 ORTHO05D000252 1.3e-06 56.6 56 44.6
Lsat_1_v5_gn_6_35220 Lactuca sativa HOM05D000401 ORTHO05D000252 1.3e-06 56.6 44 52.3
QL07p037519 Quercus lobata HOM05D000401 ORTHO05D000252 1.3e-06 56.6 42 54.8
Sabra12G0068600 Salix brachista HOM05D000401 ORTHO05D000252 1.3e-06 56.6 46 52.2
Sp5g09770 Schrenkiella parvula HOM05D000401 ORTHO05D000252 1.3e-06 56.6 41 56.1
AT3G52525 Arabidopsis thaliana HOM05D000401 ORTHO05D000252 1.7e-06 56.2 41 56.1
CDE08G0336 Ceratophyllum demersum HOM05D000401 ORTHO05D000252 1.7e-06 56.2 42 54.8
Eucgr.A02608 Eucalyptus grandis HOM05D000401 ORTHO05D000252 1.7e-06 56.2 42 54.8
Glyma.10G077800 Glycine max HOM05D000401 ORTHO05D000252 1.7e-06 56.2 40 57.5
Lsat_1_v5_gn_2_55181 Lactuca sativa HOM05D000401 ORTHO05D000252 1.7e-06 56.2 47 51.1
Sabra04G0135700 Salix brachista HOM05D000401 ORTHO05D000252 1.7e-06 56.2 42 52.4
Sed0001477 Sechium edule HOM05D000401 ORTHO05D000252 1.7e-06 56.2 46 52.2
TPR.G3489 Trifolium pratense HOM05D000401 ORTHO05D000252 1.7e-06 56.2 89 32.6
TAR633G1357 Trochodendron aralioides HOM05D000401 ORTHO05D000252 1.7e-06 56.2 89 36.0
Ah.15g090530 Amaranthus hybridus HOM05D000401 ORTHO05D000252 2.2e-06 55.8 46 47.8
Dinv22793 Davidia involucrata HOM05D000401 ORTHO05D000252 2.2e-06 55.8 42 54.8
Aa31LG10G7570 Aethionema arabicum HOM05D000401 ORTHO05D000252 2.9e-06 55.5 41 53.7
CiPaw.13G131900 Carya illinoinensis HOM05D000401 ORTHO05D000252 2.9e-06 55.5 84 33.3
HanXRQChr14g0438311 Helianthus annuus HOM05D000401 ORTHO05D000252 2.9e-06 55.5 44 52.3
Sp4g18290 Schrenkiella parvula HOM05D000401 ORTHO05D000252 2.9e-06 55.5 41 53.7
AL110U10020 Arabidopsis lyrata HOM05D000401 ORTHO05D000252 3.7e-06 55.1 41 53.7
AL4G32130 Arabidopsis lyrata HOM05D000401 ORTHO05D000252 3.7e-06 55.1 41 53.7
AT2G36026 Arabidopsis thaliana HOM05D000401 ORTHO05D000252 3.7e-06 55.1 41 53.7
CARHR162290 Cardamine hirsuta HOM05D000401 ORTHO05D000252 3.7e-06 55.1 41 53.7
MELO3C009515.2 Cucumis melo HOM05D000401 ORTHO05D000252 3.7e-06 55.1 56 39.3
CsaV3_3G037720 Cucumis sativus L. HOM05D000401 ORTHO05D000252 3.7e-06 55.1 56 39.3
Dinv17082 Davidia involucrata HOM05D000401 ORTHO05D000252 3.7e-06 55.1 41 56.1
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 3.7e-06 55.1 42 54.8
THA.LOC104823636 Tarenaya hassleriana HOM05D000401 ORTHO05D000252 3.7e-06 55.1 41 53.7
AL5G33240 Arabidopsis lyrata HOM05D000401 ORTHO05D000252 4.9e-06 54.7 41 51.2
Lalb_Chr02g0154621 Lupinus albus HOM05D000401 ORTHO05D000252 4.9e-06 54.7 46 47.8
CDE02G2649 Ceratophyllum demersum HOM05D000401 ORTHO05D000252 6.4e-06 54.3 42 52.4
Sed0008237 Sechium edule HOM05D000401 ORTHO05D000252 6.4e-06 54.3 47 44.7
Aa31LG5G21190 Aethionema arabicum HOM05D000401 ORTHO05D000252 8.3e-06 53.9 41 51.2
Carub.0005s1892 Capsella rubella HOM05D000401 ORTHO05D000252 8.3e-06 53.9 41 51.2
Cc01_g08630 Coffea canephora HOM05D000401 ORTHO05D000252 8.3e-06 53.9 42 52.4
Migut.D02416 Erythranthe guttata HOM05D000401 ORTHO05D000252 8.3e-06 53.9 82 32.9
Solyc11g068780.1 Solanum lycopersicum HOM05D000401 ORTHO05D000252 8.3e-06 53.9 41 58.5


User provided reference genes

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