Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00707 Erythranthe guttata HOM05D004389 ORTHO05D005457 6.4e-94 347.4 179 100.0
Oeu045484.1 Olea europaea HOM05D004389 ORTHO05D005457 4.6e-76 288.1 179 80.4
SGA_v2.0_scaffold16G07733 Striga asiatica HOM05D004389 ORTHO05D005457 9.6e-74 280.4 179 79.9
Dinv23968 Davidia involucrata HOM05D004389 ORTHO05D005457 1.3e-70 270.0 179 74.9
Cc02_g33710 Coffea canephora HOM05D004389 ORTHO05D005457 1.7e-70 269.6 179 74.9
Hma1.2p1_0666F.1_g199560 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 1.7e-70 269.6 179 76.0
Hma1.2p1_1362F.1_g278175 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 1.7e-70 269.6 179 76.0
SGA_v2.0_scaffold11G05813 Striga asiatica HOM05D004389 ORTHO05D005457 2.9e-70 268.9 169 81.1
unitig_747.g21568 Utricularia gibba HOM05D004389 ORTHO05D005457 3.8e-70 268.5 182 75.8
COL.COLO4_29544 Corchorus olitorius HOM05D004389 ORTHO05D005457 4.9e-70 268.1 179 74.3
Lj7A473T46 Lonicera japonica HOM05D004389 ORTHO05D005457 4.2e-69 265.0 177 75.7
Nitab4.5_0002329g0100 Nicotiana tabacum HOM05D004389 ORTHO05D005457 1.2e-68 263.5 179 73.7
ECA236G1487 Erigeron canadensis HOM05D004389 ORTHO05D005457 1.6e-68 263.1 179 72.6
Nn8g41138 Nelumbo nucifera HOM05D004389 ORTHO05D005457 1.6e-68 263.1 179 74.3
GSVIVG01006266001 Vitis vinifera HOM05D004389 ORTHO05D005457 1.6e-68 263.1 179 73.7
Thecc.05G307100 Theobroma cacao HOM05D004389 ORTHO05D005457 2.1e-68 262.7 179 72.6
Actinidia05713 Actinidia chinensis HOM05D004389 ORTHO05D005457 2.7e-68 262.3 179 74.9
Ciclev10018002m.g Citrus clementina HOM05D004389 ORTHO05D005457 2.7e-68 262.3 179 72.1
PGSC0003DMG400030976 Solanum tuberosum HOM05D004389 ORTHO05D005457 4.6e-68 261.5 179 73.7
Gohir.A08G211800 Gossypium hirsutum HOM05D004389 ORTHO05D005457 1.0e-67 260.4 178 72.5
Lj9C683G9 Lonicera japonica HOM05D004389 ORTHO05D005457 1.0e-67 260.4 178 73.6
Gorai.004G242800 Gossypium raimondii HOM05D004389 ORTHO05D005457 1.3e-67 260.0 178 72.5
Manes.09G078200 Manihot esculenta HOM05D004389 ORTHO05D005457 1.3e-67 260.0 174 74.1
COL.COLO4_19842 Corchorus olitorius HOM05D004389 ORTHO05D005457 1.8e-67 259.6 179 72.1
PGR031G3032 Punica granatum HOM05D004389 ORTHO05D005457 3.0e-67 258.8 172 73.8
Duzib177G0146 Durio zibethinus HOM05D004389 ORTHO05D005457 3.9e-67 258.5 179 71.5
Nitab4.5_0002659g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 3.9e-67 258.5 179 73.2
EL10Ac4g09330 Beta vulgaris HOM05D004389 ORTHO05D005457 5.1e-67 258.1 179 71.5
Sopen12g004700 Solanum pennellii HOM05D004389 ORTHO05D005457 5.1e-67 258.1 175 74.9
Aqoxy7G01925 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 6.7e-67 257.7 181 74.0
FAN18G1342 Fragaria x ananassa HOM05D004389 ORTHO05D005457 6.7e-67 257.7 179 72.1
Solyc12g009810.3 Solanum lycopersicum HOM05D004389 ORTHO05D005457 6.7e-67 257.7 177 73.4
PGSC0003DMG402007838 Solanum tuberosum HOM05D004389 ORTHO05D005457 6.7e-67 257.7 179 72.6
Rhsim05G0143800 Rhododendron simsii HOM05D004389 ORTHO05D005457 8.7e-67 257.3 179 72.1
TWI73G0431 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 8.7e-67 257.3 179 70.9
CiPaw.07G015300 Carya illinoinensis HOM05D004389 ORTHO05D005457 1.1e-66 256.9 178 72.5
Haze_04228 Corylus avellana HOM05D004389 ORTHO05D005457 1.1e-66 256.9 179 72.1
vmacro19638 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 1.9e-66 256.1 180 73.3
AUR62006921 Chenopodium quinoa HOM05D004389 ORTHO05D005457 2.5e-66 255.8 179 71.5
Haze_23899 Corylus avellana HOM05D004389 ORTHO05D005457 2.5e-66 255.8 178 71.3
DCAR_008416 Daucus carota HOM05D004389 ORTHO05D005457 2.5e-66 255.8 179 71.5
Gohir.D08G228501 Gossypium hirsutum HOM05D004389 ORTHO05D005457 4.3e-66 255.0 178 71.3
AUR62000890 Chenopodium quinoa HOM05D004389 ORTHO05D005457 5.6e-66 254.6 175 73.1
HanXRQChr14g0460141 Helianthus annuus HOM05D004389 ORTHO05D005457 5.6e-66 254.6 175 73.7
MBI16_g00840_MAGBIO Magnolia biondii HOM05D004389 ORTHO05D005457 5.6e-66 254.6 179 69.8
Potri.005G036500 Populus trichocarpa HOM05D004389 ORTHO05D005457 5.6e-66 254.6 180 71.7
QL03p004595 Quercus lobata HOM05D004389 ORTHO05D005457 5.6e-66 254.6 178 70.2
TPR.G33525 Trifolium pratense HOM05D004389 ORTHO05D005457 7.4e-66 254.2 179 73.2
TAR383G0075 Trochodendron aralioides HOM05D004389 ORTHO05D005457 7.4e-66 254.2 180 71.7
Glyma.05G086900 Glycine max HOM05D004389 ORTHO05D005457 9.6e-66 253.8 170 72.9
Medtr3g115100 Medicago truncatula HOM05D004389 ORTHO05D005457 9.6e-66 253.8 179 72.1
Sabra05G0037000 Salix brachista HOM05D004389 ORTHO05D005457 1.3e-65 253.4 176 72.7
Nitab4.5_0000401g0080 Nicotiana tabacum HOM05D004389 ORTHO05D005457 1.6e-65 253.1 179 71.5
PSO782G4098 Papaver somniferum HOM05D004389 ORTHO05D005457 1.6e-65 253.1 171 75.4
TAR626G0408 Trochodendron aralioides HOM05D004389 ORTHO05D005457 1.6e-65 253.1 179 71.5
PSO063G2909 Papaver somniferum HOM05D004389 ORTHO05D005457 2.1e-65 252.7 177 74.0
CSS0010710 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 2.8e-65 252.3 179 71.5
Ciclev10002655m.g Citrus clementina HOM05D004389 ORTHO05D005457 2.8e-65 252.3 174 72.4
AUR62005084 Chenopodium quinoa HOM05D004389 ORTHO05D005457 3.7e-65 251.9 175 71.4
Sc16g0008410 Simmondsia chinensis HOM05D004389 ORTHO05D005457 3.7e-65 251.9 179 69.8
Cfa006553 Carpinus fangiana HOM05D004389 ORTHO05D003318 4.8e-65 251.5 173 72.8
LjContig00312_ERROPOS870357g0027537 Lotus japonicus HOM05D004389 ORTHO05D005457 4.8e-65 251.5 179 70.4
Ah.04g159790 Amaranthus hybridus HOM05D004389 ORTHO05D005457 6.2e-65 251.1 179 69.8
Duzib128G0997 Durio zibethinus HOM05D004389 ORTHO05D005457 8.1e-65 250.8 179 70.9
Glyma.06G240600 Glycine max HOM05D004389 ORTHO05D005457 1.1e-64 250.4 179 71.5
BcaC09g50404 Brassica carinata HOM05D004389 ORTHO05D005457 1.4e-64 250.0 172 72.1
CANSAT21G2311 Cannabis sativa HOM05D004389 ORTHO05D005457 1.4e-64 250.0 179 72.6
RcHm_v2.0_Chr3g0454251 Rosa chinensis HOM05D004389 ORTHO05D005457 1.8e-64 249.6 179 70.4
CDE02G2165 Ceratophyllum demersum HOM05D004389 ORTHO05D005457 2.4e-64 249.2 172 71.5
BcaNung00158 Brassica carinata HOM05D004389 ORTHO05D005457 3.1e-64 248.8 174 70.1
BolC1t02532H Brassica oleracea HOM05D004389 ORTHO05D005457 3.1e-64 248.8 172 71.5
Cpa.g.sc58.76 Carica papaya HOM05D004389 ORTHO05D005457 3.1e-64 248.8 179 69.3
Atru.chr2.467 Acer truncatum HOM05D004389 ORTHO05D005457 4.0e-64 248.4 179 69.3
A01p20570 Brassica napus HOM05D004389 ORTHO05D005457 4.0e-64 248.4 172 72.1
C01p25870 Brassica napus HOM05D004389 ORTHO05D005457 4.0e-64 248.4 172 72.1
Phvul.007G101500 Phaseolus vulgaris HOM05D004389 ORTHO05D005457 5.3e-64 248.1 179 71.5
Sp7g15350 Schrenkiella parvula HOM05D004389 ORTHO05D005457 5.3e-64 248.1 175 70.9
arahy.Tifrunner.gnm1.ann1.95MSG7 Arachis hypogaea HOM05D004389 ORTHO05D005457 6.9e-64 247.7 180 68.9
CSS0006579 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 6.9e-64 247.7 179 71.5
FvH4_5g27531 Fragaria vesca HOM05D004389 ORTHO05D005457 6.9e-64 247.7 178 70.8
Potri.013G025600 Populus trichocarpa HOM05D004389 ORTHO05D005457 6.9e-64 247.7 180 70.0
FvH4_6g05471 Fragaria vesca HOM05D004389 ORTHO05D005457 1.2e-63 246.9 179 69.8
Lj1g0012007 Lotus japonicus HOM05D004389 ORTHO05D005457 1.2e-63 246.9 179 68.7
BraA01t01985Z Brassica rapa HOM05D004389 ORTHO05D005457 1.5e-63 246.5 172 71.5
MD04G1208300 Malus domestica HOM05D004389 ORTHO05D005457 1.5e-63 246.5 179 70.9
FAN05G1752 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.0e-63 246.1 179 70.4
TWI53G0891 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 2.0e-63 246.1 177 68.4
FAN05G0231 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.6e-63 245.7 179 69.8
FAN05G0672 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.6e-63 245.7 179 69.8
BcaB03g14176 Brassica carinata HOM05D004389 ORTHO05D005457 3.4e-63 245.4 174 70.7
Medtr3g096610 Medicago truncatula HOM05D004389 ORTHO05D005457 3.4e-63 245.4 170 73.5
Eucgr.H04472 Eucalyptus grandis HOM05D004389 ORTHO05D005457 4.5e-63 245.0 179 68.7
FAN05G0500 Fragaria x ananassa HOM05D004389 ORTHO05D005457 4.5e-63 245.0 179 70.4
CARHR223240 Cardamine hirsuta HOM05D004389 ORTHO05D005457 1.0e-62 243.8 174 69.5
Hund07052 Selenicereus undatus HOM05D004389 ORTHO05D005457 1.3e-62 243.4 193 66.3
THA.LOC104805865 Tarenaya hassleriana HOM05D004389 ORTHO05D005457 1.3e-62 243.4 179 69.8
FAN09G0842 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.7e-62 243.0 179 69.3
FAN14G5008 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.2e-62 242.7 179 68.7
Prupe.6G329200 Prunus persica HOM05D004389 ORTHO05D005457 2.9e-62 242.3 179 68.2
Sabra13G0026700 Salix brachista HOM05D004389 ORTHO05D005457 4.9e-62 241.5 207 63.8
AL7G38020 Arabidopsis lyrata HOM05D004389 ORTHO05D005457 8.4e-62 240.7 174 69.0
CsaV3_1G039140 Cucumis sativus L. HOM05D004389 ORTHO05D005457 8.4e-62 240.7 179 67.6
HPP92_010418 Vanilla planifolia HOM05D004389 ORTHO05D005457 8.4e-62 240.7 169 73.4
CANSAT21G1920 Cannabis sativa HOM05D004389 ORTHO05D005457 1.1e-61 240.4 179 69.8
Aa31sc17G40 Aethionema arabicum HOM05D004389 ORTHO05D005457 1.9e-61 239.6 174 69.5
Carub.0007s2468 Capsella rubella HOM05D004389 ORTHO05D005457 1.9e-61 239.6 175 70.3
Thhalv10026361m.g Eutrema salsugineum HOM05D004389 ORTHO05D005457 1.9e-61 239.6 175 69.1
Aa31sc17G90 Aethionema arabicum HOM05D004389 ORTHO05D005457 4.2e-61 238.4 171 70.8
ClCG03G016830 Citrullus lanatus HOM05D004389 ORTHO05D005457 4.2e-61 238.4 178 69.7
AUR62000567 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.2e-60 236.9 160 72.5
ATR0626G001 Amborella trichopoda HOM05D004389 ORTHO05D005457 1.6e-60 236.5 179 66.5
AT4G16710 Arabidopsis thaliana HOM05D004389 ORTHO05D005457 1.6e-60 236.5 174 68.4
Sed0018697 Sechium edule HOM05D004389 ORTHO05D005457 4.6e-60 235.0 167 70.1
MELO3C015339.2 Cucumis melo HOM05D004389 ORTHO05D005457 6.0e-60 234.6 179 66.5
Lsat_1_v5_gn_7_96081 Lactuca sativa HOM05D004389 ORTHO05D005457 6.0e-60 234.6 174 69.0
vmacro08924 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 1.0e-59 233.8 221 58.4
GSVIVG01000019001 Vitis vinifera HOM05D004389 ORTHO05D005457 3.0e-59 232.3 157 75.8
Zm00001eb272600 Zea mays HOM05D004389 ORTHO05D005457 3.0e-59 232.3 164 71.3
HanXRQChr04g0126711 Helianthus annuus HOM05D004389 ORTHO05D005457 1.9e-58 229.6 161 73.9
SEGI_15909 Sequoiadendron giganteum HOM05D004389 ORTHO05D005457 4.3e-58 228.4 171 66.7
Zm00001eb264580 Zea mays HOM05D004389 ORTHO05D005457 3.7e-57 225.3 169 69.2
Peaxi162Scf00523g00530 Petunia axillaris HOM05D004389 ORTHO05D005457 1.4e-56 223.4 174 68.4
RcHm_v2.0_Chr7g0218901 Rosa chinensis HOM05D004389 ORTHO05D005457 2.9e-54 215.7 147 72.1
Rhsim05G0010600 Rhododendron simsii HOM05D004389 ORTHO05D005457 1.9e-53 213.0 201 57.7
Psat0s2070g0160 Pisum sativum HOM05D004389 ORTHO05D005457 2.5e-53 212.6 150 72.0
Lalb_Chr05g0219701 Lupinus albus HOM05D004389 ORTHO05D005457 5.5e-53 211.5 174 64.4
Psat0s1802g0120 Pisum sativum HOM05D004389 ORTHO05D005457 5.5e-53 211.5 150 72.0
Dinv40263 Davidia involucrata HOM05D004389 ORTHO05D005457 5.5e-45 184.9 120 77.5
AagrBONN_evm.TU.Sc2ySwM_117.3666 Anthoceros agrestis HOM05D004389 ORTHO05D005457 1.4e-43 180.3 174 54.0
Mapoly0013s0083 Marchantia polymorpha HOM05D004389 ORTHO05D005457 4.3e-42 175.3 164 53.0
vmacro22564 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 7.4e-42 174.5 170 57.1
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 9.7e-42 174.1 174 52.9
SMO171G0140 Selaginella moellendorffii HOM05D004389 ORTHO05D005457 1.4e-40 170.2 165 53.3
Peaxi162Scf02135g00022 Petunia axillaris HOM05D004389 ORTHO05D005457 6.9e-40 167.9 171 55.6
Pp3c11_4930 Physcomitrium patens HOM05D004389 ORTHO05D005457 6.9e-40 167.9 165 51.5
Aqoxy4G02160 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 1.5e-39 166.8 129 69.0
Prupe.5G030200 Prunus persica HOM05D004389 ORTHO05D005457 1.9e-37 159.8 117 71.8
Os02g0467700 Oryza sativa ssp. japonica HOM05D004389 ORTHO05D005457 4.2e-37 158.7 115 68.7
vmacro15018 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 4.7e-36 155.2 166 53.6
Cre13.g585850 Chlamydomonas reinhardtii HOM05D004389 ORTHO05D005457 6.7e-35 151.4 173 49.7
CBR_g24390 Chara braunii HOM05D004389 ORTHO05D005457 2.0e-34 149.8 221 42.1
PRCOL_00003734 Prasinoderma coloniale HOM05D004389 ORTHO05D005457 7.4e-34 147.9 160 50.6
CAN.G551.74 Capsicum annuum HOM05D004389 ORTHO05D005457 9.7e-34 147.5 104 72.1
vmacro22211 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 3.1e-32 142.5 190 47.9
MCO09G816 Micromonas commoda HOM05D004389 ORTHO05D005457 1.2e-31 140.6 161 47.2
Aqoxy5G02271 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 6.1e-28 128.3 89 73.0
Ca_16978_v3 Cicer arietinum L. HOM05D004389 ORTHO05D005457 1.0e-27 127.5 86 72.1
Zm00001eb058290 Zea mays HOM05D004389 ORTHO05D005457 1.0e-27 127.5 82 74.4
TPR.G33563 Trifolium pratense HOM05D004389 ORTHO05D005457 3.9e-27 125.6 83 73.5
Nitab4.5_0006964g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 9.7e-26 120.9 93 65.6
RhsimUnG0192500 Rhododendron simsii HOM05D004389 ORTHO05D005457 2.8e-25 119.4 83 68.7
SHI18162 Sapria himalayana HOM05D004389 ORTHO05D005457 1.8e-24 116.7 142 47.2
TPR.G30972 Trifolium pratense HOM05D004389 ORTHO05D005457 1.8e-24 116.7 85 69.4
FvH4_6g10990 Fragaria vesca HOM05D004389 ORTHO05D005457 1.0e-22 110.9 97 61.9
MD15G1188200 Malus domestica HOM05D004389 ORTHO05D005457 2.9e-22 109.4 117 54.7
QL07p009462 Quercus lobata HOM05D004389 ORTHO05D005457 7.2e-21 104.8 75 70.7
Zm00001eb380920 Zea mays HOM05D004389 ORTHO05D005457 2.1e-20 103.2 82 62.2
Actinidia39666 Actinidia chinensis HOM05D004389 ORTHO05D056204 6.3e-17 91.7 147 42.9
Cfa025624 Carpinus fangiana HOM05D004389 ORTHO05D125512 1.6e-12 77.0 217 33.2
vmacro15154 Vaccinium macrocarpon HOM05D004389 ORTHO05D022937 2.7e-12 76.3 98 45.9
SHI18161 Sapria himalayana HOM05D004389 ORTHO05D005457 3.6e-12 75.9 56 57.1
HPP92_010328 Vanilla planifolia HOM05D004389 ORTHO05D022937 4.9e-09 65.5 42 69.0
Medtr6g452950 Medicago truncatula HOM05D029366 ORTHO05D022937 2.4e-08 63.2 42 66.7
vmacro17239 Vaccinium macrocarpon HOM05D040504 ORTHO05D426804 3.1e-08 62.8 160 32.5
QL07p009230 Quercus lobata HOM05D004389 ORTHO05D005457 5.4e-08 62.0 85 44.7


User provided reference genes

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