Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 1.3e-64 249.6 130 100.0
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 1.2e-25 120.2 131 55.7
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 5.2e-21 104.8 125 51.2
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 5.2e-21 104.8 138 44.2
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 1.2e-20 103.6 162 42.6
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 4.4e-20 101.7 120 48.3
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 1.7e-19 99.8 149 43.0
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 8.4e-19 97.4 124 46.0
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 1.4e-18 96.7 155 43.9
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 2.1e-17 92.8 154 41.6
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 2.7e-17 92.4 165 38.8
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 6.0e-17 91.3 146 43.2
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 7.8e-17 90.9 148 39.2
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 1.0e-16 90.5 147 42.9
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.3e-16 90.1 144 43.1
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.7e-16 89.7 143 43.4
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 2.3e-16 89.4 151 41.1
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 3.0e-16 89.0 142 40.1
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 8.7e-16 87.4 153 40.5
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.1e-15 87.0 146 41.1
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 1.9e-15 86.3 148 39.9
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.9e-15 86.3 156 39.1
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 2.5e-15 85.9 143 42.0
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 2.5e-15 85.9 143 42.0
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.5e-15 85.9 151 37.7
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 2.5e-15 85.9 150 40.0
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 4.3e-15 85.1 159 37.1
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 4.3e-15 85.1 152 37.5
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 5.6e-15 84.7 164 36.6
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 5.6e-15 84.7 156 40.4
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 5.6e-15 84.7 127 44.1
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 9.6e-15 84.0 152 38.8
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.3e-14 83.6 143 41.3
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 1.6e-14 83.2 152 36.8
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.6e-14 83.2 143 41.3
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 1.6e-14 83.2 124 41.1
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 2.1e-14 82.8 157 38.2
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.8e-14 82.4 155 35.5
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 2.8e-14 82.4 138 40.6
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 6.2e-14 81.3 157 37.6
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 8.1e-14 80.9 163 36.2
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 8.1e-14 80.9 104 49.0
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 8.1e-14 80.9 164 36.0
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.1e-13 80.5 147 40.8
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 1.4e-13 80.1 115 41.7
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.4e-13 80.1 157 36.9
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 1.8e-13 79.7 135 37.8
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.8e-13 79.7 170 35.3
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.4e-13 79.3 132 40.9
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.4e-13 79.3 147 38.8
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 2.4e-13 79.3 171 35.7
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 2.4e-13 79.3 134 38.8
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 3.1e-13 79.0 154 35.7
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 4.0e-13 78.6 144 37.5
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 6.9e-13 77.8 133 39.8
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 9.0e-13 77.4 147 38.8
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 9.0e-13 77.4 147 34.7
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 9.0e-13 77.4 162 37.7
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 9.0e-13 77.4 151 37.7
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-12 77.0 171 35.1
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.2e-12 77.0 170 34.7
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 1.2e-12 77.0 149 37.6
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 1.2e-12 77.0 161 36.0
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 1.5e-12 76.6 172 33.1
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.5e-12 76.6 171 35.7
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 1.5e-12 76.6 149 37.6
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 1.5e-12 76.6 152 36.8
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.5e-12 76.6 135 37.0
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 2.6e-12 75.9 159 33.3
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 2.6e-12 75.9 167 33.5
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 2.6e-12 75.9 140 37.1
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 3.4e-12 75.5 170 34.7
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 3.4e-12 75.5 149 35.6
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 3.4e-12 75.5 120 40.8
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 3.4e-12 75.5 152 36.8
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 5.8e-12 74.7 162 34.0
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 5.8e-12 74.7 156 34.0
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.8e-12 74.7 156 34.0
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 5.8e-12 74.7 117 41.0
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 7.6e-12 74.3 155 37.4
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 1.7e-11 73.2 142 37.3
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 1.7e-11 73.2 141 36.2
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 1.7e-11 73.2 166 34.3
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 1.7e-11 73.2 144 41.0
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 2.2e-11 72.8 140 36.4
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.2e-11 72.8 155 37.4
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 2.2e-11 72.8 149 36.2
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 2.9e-11 72.4 146 34.9
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.9e-11 72.4 152 34.2
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 4.9e-11 71.6 88 45.5
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 4.9e-11 71.6 159 34.0
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 6.4e-11 71.2 150 36.7
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 8.4e-11 70.9 99 42.4
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 1.4e-10 70.1 136 37.5
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.4e-10 70.1 144 33.3
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 1.9e-10 69.7 91 42.9
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 1.9e-10 69.7 142 35.9
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 2.4e-10 69.3 176 30.7
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 3.2e-10 68.9 121 37.2
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 4.2e-10 68.6 157 31.8
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 4.2e-10 68.6 170 30.6
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 5.4e-10 68.2 115 38.3
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 5.4e-10 68.2 134 36.6
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 5.4e-10 68.2 105 41.0
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 9.3e-10 67.4 147 38.8
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 2.1e-09 66.2 160 36.9
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 2.7e-09 65.9 141 35.5
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 3.5e-09 65.5 140 36.4
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 3.5e-09 65.5 142 34.5
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 3.5e-09 65.5 140 36.4
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 3.5e-09 65.5 142 34.5
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 3.5e-09 65.5 176 30.1
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 3.5e-09 65.5 120 37.5
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 4.6e-09 65.1 144 36.8
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 4.6e-09 65.1 166 33.1
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 7.8e-09 64.3 148 33.8
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 1.0e-08 63.9 139 36.7
Zm00001eb432720 Zea mays HOM05D005211 ORTHO05D006148 1.0e-08 63.9 165 33.3
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.7e-08 63.2 85 43.5
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 1.7e-08 63.2 157 29.9
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 2.3e-08 62.8 153 35.3
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 2.3e-08 62.8 153 35.3
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 2.3e-08 62.8 153 34.0
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 3.0e-08 62.4 156 33.3
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 3.0e-08 62.4 140 35.0
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 3.0e-08 62.4 140 35.0
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 3.0e-08 62.4 147 32.7
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 6.6e-08 61.2 118 34.7
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 8.7e-08 60.8 118 34.7
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 1.1e-07 60.5 113 36.3
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 1.5e-07 60.1 153 32.0
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.9e-07 59.7 139 34.5
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 3.3e-07 58.9 145 33.8
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 4.3e-07 58.5 92 42.4
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 5.6e-07 58.2 117 36.8
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 7.3e-07 57.8 113 35.4
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 1.6e-06 56.6 79 46.8
C04p70060 Brassica napus HOM05D005211 ORTHO05D006148 2.8e-06 55.8 117 34.2
BolC4t28506H Brassica oleracea HOM05D005211 ORTHO05D006148 2.8e-06 55.8 117 34.2
Ca_21181_v3 Cicer arietinum L. HOM05D004507 ORTHO05D004874 2.8e-06 55.8 164 28.0
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 3.6e-06 55.5 157 32.5
Lj4g0026981 Lotus japonicus HOM05D004507 ORTHO05D004874 6.2e-06 54.7 180 28.9
Glyma.13G091500 Glycine max HOM05D004507 ORTHO05D004874 8.1e-06 54.3 175 26.9


User provided reference genes

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