Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 3.5e-222 774.6 383 100.0
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 6.5e-144 514.6 394 69.5
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 1.3e-123 447.2 472 53.2
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 1.7e-123 446.8 400 62.2
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 5.9e-121 438.3 394 59.9
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 1.6e-118 430.3 408 56.6
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 3.6e-118 429.1 383 58.5
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 5.7e-116 421.8 418 54.8
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 2.8e-115 419.5 391 58.3
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 8.2e-115 417.9 396 57.3
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 3.1e-114 416.0 393 56.7
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 4.1e-114 415.6 396 57.3
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 7.0e-114 414.8 400 56.5
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 2.0e-113 413.3 387 57.1
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 5.9e-113 411.8 393 56.5
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 1.7e-112 410.2 387 57.6
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.2e-112 409.8 396 56.8
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 2.2e-112 409.8 389 56.6
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.8e-112 409.1 391 58.1
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 3.8e-112 409.1 388 57.0
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 3.2e-111 406.0 295 68.8
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 4.2e-111 405.6 437 53.3
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 4.2e-111 405.6 390 58.2
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 5.5e-111 405.2 390 57.9
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 9.4e-111 404.4 384 59.1
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 2.1e-110 403.3 386 55.7
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 3.6e-110 402.5 386 56.0
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 6.1e-110 401.7 390 56.4
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 1.0e-109 401.0 386 56.0
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.0e-109 401.0 401 55.1
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 1.8e-109 400.2 394 56.1
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 3.0e-109 399.4 261 73.6
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 6.8e-109 398.3 385 56.1
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 8.8e-109 397.9 340 61.2
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 3.4e-108 396.0 387 55.8
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 3.4e-108 396.0 396 56.8
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 1.7e-107 393.7 326 62.9
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 1.7e-107 393.7 445 50.8
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 3.7e-107 392.5 385 56.6
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 3.7e-107 392.5 395 53.2
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 3.7e-107 392.5 397 55.2
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 4.8e-107 392.1 384 54.7
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.4e-106 390.6 366 56.0
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 9.1e-106 387.9 391 55.0
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 2.7e-105 386.3 329 60.8
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 3.5e-105 386.0 389 55.3
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 4.5e-105 385.6 385 54.5
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 7.7e-105 384.8 384 54.9
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 1.7e-104 383.6 384 54.4
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 3.2e-103 379.4 249 70.7
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 4.2e-103 379.0 402 54.0
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 4.2e-103 379.0 397 55.4
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 1.5e-100 370.5 400 54.2
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 5.7e-100 368.6 260 68.1
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 9.8e-100 367.9 313 59.7
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 1.7e-99 367.1 387 51.9
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 3.7e-99 365.9 249 68.3
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 3.7e-99 365.9 388 52.8
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 8.3e-99 364.8 279 60.9
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 8.3e-99 364.8 309 60.2
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 1.4e-98 364.0 379 51.7
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 3.1e-98 362.8 362 54.7
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 5.4e-98 362.1 405 51.4
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 9.2e-98 361.3 399 49.1
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 1.2e-97 360.9 400 49.8
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 2.0e-97 360.1 252 68.3
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 2.7e-97 359.8 345 55.4
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 5.9e-97 358.6 307 59.0
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 5.0e-96 355.5 320 56.9
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 1.5e-95 354.0 399 48.9
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 1.5e-95 354.0 399 48.9
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 3.3e-95 352.8 388 50.5
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 3.3e-95 352.8 388 51.3
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 9.5e-95 351.3 404 48.3
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 1.6e-94 350.5 345 53.6
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 3.4e-92 342.8 388 51.3
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 7.8e-89 331.6 392 48.2
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 1.1e-87 327.8 397 50.1
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 6.2e-86 322.0 390 45.4
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 1.2e-84 317.8 284 56.0
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 5.4e-82 308.9 304 53.0
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 5.0e-80 302.4 439 43.5
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 1.2e-78 297.7 182 76.9
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 1.6e-78 297.4 389 43.7
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 4.7e-78 295.8 394 44.9
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.3e-77 293.5 172 77.9
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 1.7e-75 287.3 256 54.7
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 3.7e-75 286.2 303 52.8
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 3.0e-72 276.6 304 53.9
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.4e-69 267.7 263 53.6
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 5.2e-69 265.8 207 65.7
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 2.7e-65 253.4 287 53.0
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 5.8e-60 235.7 214 55.6
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 5.8e-60 235.7 290 49.3
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 5.8e-60 235.7 389 39.3
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.3e-56 223.8 377 42.7
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 3.9e-56 223.0 289 46.0
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 1.5e-55 221.1 231 50.6
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 6.9e-53 212.2 151 64.2
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 2.4e-50 203.8 178 60.1
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 2.4e-45 187.2 249 40.6
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 1.3e-43 181.4 113 73.5
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 1.3e-43 181.4 223 55.2
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 4.9e-43 179.5 289 39.4
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 1.1e-39 168.3 107 74.8
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 6.0e-33 146.0 123 60.2
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 2.8e-30 137.1 87 70.1
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 1.4e-29 134.8 281 33.5
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 8.5e-27 125.6 84 65.5
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 8.5e-27 125.6 258 34.9
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.4e-26 124.8 255 38.4
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 2.1e-25 120.9 139 45.3
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 7.2e-18 95.9 146 42.5
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 4.6e-17 93.2 84 48.8
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 3.8e-11 73.6 58 60.3
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 4.7e-09 66.6 47 63.8
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 6.7e-08 62.8 94 44.7
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 2.2e-06 57.8 188 33.5


User provided reference genes

Program Settings