Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00400 Erythranthe guttata HOM05D004482 ORTHO05D005212 5.6e-190 667.5 359 100.0
SGA_v2.0_scaffold31G12588 Striga asiatica HOM05D004482 ORTHO05D005212 3.1e-156 555.4 357 84.0
MSTRG.24610 Avicennia marina HOM05D004482 ORTHO05D005212 1.4e-148 530.0 357 80.1
Oeu013809.1 Olea europaea HOM05D004482 ORTHO05D005212 2.3e-143 512.7 369 75.9
Cc03_g07940 Coffea canephora HOM05D004482 ORTHO05D005212 1.0e-135 487.3 362 72.9
Peaxi162Scf00753g00331 Petunia axillaris HOM05D004482 ORTHO05D005212 1.4e-129 466.8 340 72.6
Lj3C404T0 Lonicera japonica HOM05D004482 ORTHO05D005212 4.2e-129 465.3 358 69.8
Lj3A407G37 Lonicera japonica HOM05D004482 ORTHO05D005212 1.0e-127 460.7 369 68.0
Sopen09g034910 Solanum pennellii HOM05D004482 ORTHO05D005212 2.0e-126 456.4 358 68.7
Solyc09g092030.4 Solanum lycopersicum HOM05D004482 ORTHO05D005212 3.3e-126 455.7 339 70.5
unitig_8.g4998 Utricularia gibba HOM05D004482 ORTHO05D005212 1.3e-125 453.8 358 71.2
CAN.G1333.13 Capsicum annuum HOM05D004482 ORTHO05D005212 2.8e-125 452.6 338 70.1
ECA233G3015 Erigeron canadensis HOM05D004482 ORTHO05D005212 2.6e-123 446.0 358 66.2
Actinidia11419 Actinidia chinensis HOM05D004482 ORTHO05D005212 1.3e-122 443.7 347 67.7
Peaxi162Scf00047g00420 Petunia axillaris HOM05D004482 ORTHO05D005212 1.9e-121 439.9 414 60.1
Hma1.2p1_0187F.1_g082340 Hydrangea macrophylla HOM05D004482 ORTHO05D005212 5.2e-119 431.8 375 64.3
Ciclev10005271m.g Citrus clementina HOM05D004482 ORTHO05D005212 2.6e-118 429.5 338 66.0
Atru.chr4.1674 Acer truncatum HOM05D004482 ORTHO05D005212 9.7e-118 427.6 356 63.2
HanXRQChr02g0059021 Helianthus annuus HOM05D004482 ORTHO05D005212 1.3e-117 427.2 358 64.5
Rhsim02G0059000 Rhododendron simsii HOM05D004482 ORTHO05D005212 4.8e-117 425.2 394 60.9
HanXRQChr16g0497991 Helianthus annuus HOM05D004482 ORTHO05D005212 3.1e-116 422.5 349 64.5
GSVIVG01020907001 Vitis vinifera HOM05D004482 ORTHO05D005212 4.1e-116 422.2 336 65.2
Lsat_1_v5_gn_6_61160 Lactuca sativa HOM05D004482 ORTHO05D005212 1.2e-115 420.6 357 62.7
Manes.15G054600 Manihot esculenta HOM05D004482 ORTHO05D005212 1.6e-115 420.2 338 63.3
Gohir.D02G025500 Gossypium hirsutum HOM05D004482 ORTHO05D005212 6.5e-114 414.8 347 62.2
TAR362G0107 Trochodendron aralioides HOM05D004482 ORTHO05D005212 4.2e-113 412.1 352 63.1
Gorai.005G031400 Gossypium raimondii HOM05D004482 ORTHO05D005212 5.5e-113 411.8 347 61.7
MELO3C020442.2 Cucumis melo HOM05D004482 ORTHO05D005212 9.4e-113 411.0 342 63.5
COL.COLO4_20166 Corchorus olitorius HOM05D004482 ORTHO05D005212 2.7e-112 409.5 356 60.4
CsaV3_2G011600 Cucumis sativus L. HOM05D004482 ORTHO05D005212 2.7e-112 409.5 342 63.2
Cpa.g.sc443.1 Carica papaya HOM05D004482 ORTHO05D005212 4.7e-112 408.7 357 62.5
PGR083G2076 Punica granatum HOM05D004482 ORTHO05D005212 8.0e-112 407.9 335 64.8
Thecc.04G200900 Theobroma cacao HOM05D004482 ORTHO05D005212 1.0e-111 407.5 356 60.1
Gohir.A02G021300 Gossypium hirsutum HOM05D004482 ORTHO05D005212 5.2e-111 405.2 347 61.1
Prupe.1G010300 Prunus persica HOM05D004482 ORTHO05D005212 6.8e-111 404.8 338 62.4
Gohir.D02G027800 Gossypium hirsutum HOM05D004482 ORTHO05D005212 1.5e-110 403.7 347 61.7
Nitab4.5_0000401g0030 Nicotiana tabacum HOM05D004482 ORTHO05D005212 5.7e-110 401.7 320 67.8
Cfa014938 Carpinus fangiana HOM05D004482 ORTHO05D005212 2.8e-109 399.4 338 63.6
FAN12G3502 Fragaria x ananassa HOM05D004482 ORTHO05D005212 4.8e-109 398.7 339 61.9
MD00G1113200 Malus domestica HOM05D004482 ORTHO05D005212 4.8e-109 398.7 335 62.1
MD04G1010600 Malus domestica HOM05D004482 ORTHO05D005212 1.1e-108 397.5 348 60.3
Potri.017G056800 Populus trichocarpa HOM05D004482 ORTHO05D005212 1.1e-108 397.5 338 63.0
Duzib151G0803 Durio zibethinus HOM05D004482 ORTHO05D005212 2.4e-108 396.4 374 57.0
FvH4_4g13790 Fragaria vesca HOM05D004482 ORTHO05D005212 3.1e-108 396.0 338 61.8
RcHm_v2.0_Chr4g0414711 Rosa chinensis HOM05D004482 ORTHO05D005212 3.1e-108 396.0 345 60.0
Nitab4.5_0006210g0070 Nicotiana tabacum HOM05D004482 ORTHO05D005212 7.0e-108 394.8 320 67.5
PGSC0003DMG400026426 Solanum tuberosum HOM05D004482 ORTHO05D005212 2.0e-107 393.3 321 67.9
CiPaw.01G120200 Carya illinoinensis HOM05D004482 ORTHO05D005212 3.5e-107 392.5 336 61.9
Lalb_Chr07g0186731 Lupinus albus HOM05D004482 ORTHO05D005212 3.5e-107 392.5 336 59.8
Sed0016107 Sechium edule HOM05D004482 ORTHO05D005212 5.9e-107 391.7 338 62.1
TPR.G11944 Trifolium pratense HOM05D004482 ORTHO05D005212 5.9e-107 391.7 342 59.6
Lj4g0012954 Lotus japonicus HOM05D004482 ORTHO05D005212 1.7e-106 390.2 357 57.7
vmacro15546 Vaccinium macrocarpon HOM05D004482 ORTHO05D005212 3.8e-106 389.0 476 50.4
AUR62018590 Chenopodium quinoa HOM05D004482 ORTHO05D005212 6.6e-106 388.3 341 57.2
FAN17G0447 Fragaria x ananassa HOM05D004482 ORTHO05D005212 1.9e-105 386.7 360 58.6
ClCG06G007870 Citrullus lanatus HOM05D004482 ORTHO05D005212 7.2e-105 384.8 376 57.4
Psat7g074240 Pisum sativum HOM05D004482 ORTHO05D005212 9.5e-105 384.4 338 59.5
Glyma.05G154100 Glycine max HOM05D004482 ORTHO05D005212 2.1e-104 383.3 338 60.4
arahy.Tifrunner.gnm1.ann1.ENCW2M Arachis hypogaea HOM05D004482 ORTHO05D005212 2.8e-104 382.9 363 57.0
Dinv27224 Davidia involucrata HOM05D004482 ORTHO05D005212 2.8e-104 382.9 278 72.3
Medtr8g085350 Medicago truncatula HOM05D004482 ORTHO05D005212 4.7e-104 382.1 333 59.5
Glyma.08G111900 Glycine max HOM05D004482 ORTHO05D005212 5.2e-103 378.6 338 59.2
Sed0019182 Sechium edule HOM05D004482 ORTHO05D005212 5.2e-103 378.6 333 60.7
Duzib212G0483 Durio zibethinus HOM05D004482 ORTHO05D005212 8.9e-103 377.9 347 58.8
Gohir.D02G027400 Gossypium hirsutum HOM05D004482 ORTHO05D005212 3.4e-102 375.9 347 58.2
Ah.11g041390 Amaranthus hybridus HOM05D004482 ORTHO05D005212 5.7e-102 375.2 339 57.5
Hund18995 Selenicereus undatus HOM05D004482 ORTHO05D005212 5.7e-102 375.2 355 55.5
EL10Ac4g09020 Beta vulgaris HOM05D004482 ORTHO05D005212 7.5e-102 374.8 342 55.8
TWI73G1291 Tripterygium wilfordii HOM05D004482 ORTHO05D005212 2.2e-101 373.2 339 58.4
AUR62020829 Chenopodium quinoa HOM05D004482 ORTHO05D005212 3.1e-100 369.4 356 53.9
A04p25280 Brassica napus HOM05D004482 ORTHO05D005212 7.0e-100 368.2 342 57.6
Cpa.g.sc173.9 Carica papaya HOM05D004482 ORTHO05D005212 7.0e-100 368.2 293 65.9
BraA04t18031Z Brassica rapa HOM05D004482 ORTHO05D005212 3.5e-99 365.9 345 56.8
Oeu006195.1 Olea europaea HOM05D004482 ORTHO05D005212 3.5e-99 365.9 317 66.9
Aqoxy2G00031 Aquilegia oxysepala HOM05D004482 ORTHO05D005212 5.9e-99 365.2 335 57.0
BcaC02g07886 Brassica carinata HOM05D004482 ORTHO05D005212 2.9e-98 362.8 338 56.8
CANSAT78G1841 Cannabis sativa HOM05D004482 ORTHO05D005212 2.9e-98 362.8 359 58.5
BolC4t27707H Brassica oleracea HOM05D004482 ORTHO05D005212 3.9e-98 362.5 338 56.8
arahy.Tifrunner.gnm1.ann1.R808EC Arachis hypogaea HOM05D004482 ORTHO05D005212 6.6e-98 361.7 309 61.5
Carub.0004s1412 Capsella rubella HOM05D004482 ORTHO05D005212 6.6e-98 361.7 346 56.4
Sp4g15100 Schrenkiella parvula HOM05D004482 ORTHO05D005212 8.6e-98 361.3 344 56.7
SalBow3G0632 Salvia bowleyana HOM05D004482 ORTHO05D005212 1.1e-97 360.9 249 81.1
THA.LOC104826120 Tarenaya hassleriana HOM05D004482 ORTHO05D005212 1.5e-97 360.5 357 56.3
BolC3t14519H Brassica oleracea HOM05D004482 ORTHO05D005212 1.9e-97 360.1 344 56.7
A03p18310 Brassica napus HOM05D004482 ORTHO05D005212 7.3e-97 358.2 344 56.4
C03p21360 Brassica napus HOM05D004482 ORTHO05D005212 2.8e-96 356.3 355 55.2
Nn3g19571 Nelumbo nucifera HOM05D004482 ORTHO05D005212 4.7e-96 355.5 345 58.0
QL06p025411 Quercus lobata HOM05D004482 ORTHO05D005212 4.7e-96 355.5 310 61.6
BraA03t11091Z Brassica rapa HOM05D004482 ORTHO05D005212 6.1e-96 355.1 344 55.8
AL4G28200 Arabidopsis lyrata HOM05D004482 ORTHO05D005212 8.0e-96 354.8 351 53.8
Aa31LG5G4410 Aethionema arabicum HOM05D004482 ORTHO05D005212 1.0e-95 354.4 372 52.4
AT2G32760 Arabidopsis thaliana HOM05D004482 ORTHO05D005212 1.4e-95 354.0 333 56.2
FAN22G1791 Fragaria x ananassa HOM05D004482 ORTHO05D005212 4.0e-95 352.4 444 46.8
C04p62340 Brassica napus HOM05D000474 ORTHO05D005212 6.4e-93 345.1 359 52.9
PSO339G2282 Papaver somniferum HOM05D004482 ORTHO05D005212 6.0e-91 338.6 340 55.0
BcaB06g28632 Brassica carinata HOM05D004482 ORTHO05D005212 8.6e-90 334.7 337 54.9
Sc19g0007180 Simmondsia chinensis HOM05D004482 ORTHO05D005212 5.6e-89 332.0 273 62.3
Lalb_Chr21g0313021 Lupinus albus HOM05D004482 ORTHO05D005212 9.5e-89 331.3 293 58.7
ATR1096G138 Amborella trichopoda HOM05D004482 ORTHO05D005212 2.8e-88 329.7 372 52.7
Ca_17968_v3 Cicer arietinum L. HOM05D004482 ORTHO05D005212 8.0e-88 328.2 321 56.7
Dinv38218 Davidia involucrata HOM05D004482 ORTHO05D005212 1.8e-87 327.0 267 66.3
Eucgr.H02773 Eucalyptus grandis HOM05D004482 ORTHO05D005212 8.9e-87 324.7 313 59.4
CARHR126650 Cardamine hirsuta HOM05D004482 ORTHO05D005212 2.0e-86 323.6 293 57.3
Thhalv10016939m.g Eutrema salsugineum HOM05D004482 ORTHO05D005212 2.0e-86 323.6 321 55.8
Nn3g19999 Nelumbo nucifera HOM05D004482 ORTHO05D005212 9.8e-86 321.2 337 54.9
Gohir.A09G205700 Gossypium hirsutum HOM05D004482 ORTHO05D005212 1.3e-85 320.9 319 56.7
MBI19_g24734_MAGBIO Magnolia biondii HOM05D004482 ORTHO05D005212 1.7e-85 320.5 409 48.7
Gorai.006G223000 Gossypium raimondii HOM05D004482 ORTHO05D005212 3.7e-85 319.3 328 55.8
HPP92_017061 Vanilla planifolia HOM05D004482 ORTHO05D005212 1.1e-84 317.8 350 49.4
FAN07G1054 Fragaria x ananassa HOM05D004482 ORTHO05D005212 2.4e-84 316.6 323 54.2
Gohir.D09G199300 Gossypium hirsutum HOM05D004482 ORTHO05D005212 3.2e-84 316.2 319 56.7
Haze_11622 Corylus avellana HOM05D004482 ORTHO05D005212 6.0e-83 312.0 551 39.6
PSO384G1658 Papaver somniferum HOM05D004482 ORTHO05D005212 6.0e-83 312.0 340 52.9
Phvul.003G290900 Phaseolus vulgaris HOM05D004482 ORTHO05D005212 7.8e-83 311.6 302 57.0
Lsat_1_v5_gn_2_46161 Lactuca sativa HOM05D004482 ORTHO05D005212 1.7e-82 310.5 321 55.5
HanXRQChr10g0277641 Helianthus annuus HOM05D004482 ORTHO05D005212 1.9e-81 307.0 312 55.8
Gohir.D02G025900 Gossypium hirsutum HOM05D004482 ORTHO05D005212 2.1e-80 303.5 224 68.3
MBI19_g24366_MAGBIO Magnolia biondii HOM05D004482 ORTHO05D005212 2.0e-78 297.0 308 55.5
Os06g0715000 Oryza sativa ssp. japonica HOM05D004482 ORTHO05D005212 1.9e-76 290.4 343 46.9
CDE08G1272 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 7.1e-68 261.9 349 45.3
CDE09G1401 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 6.0e-67 258.8 344 46.8
DCAR_001940 Daucus carota HOM05D004482 ORTHO05D005212 1.2e-62 244.6 332 45.8
Oeu006194.1 Olea europaea HOM05D004482 ORTHO05D005212 2.6e-62 243.4 192 72.4
BcaNung06790 Brassica carinata HOM05D004482 ORTHO05D005212 1.7e-61 240.7 273 50.5
Duzib212G1026 Durio zibethinus HOM05D004482 ORTHO05D005212 5.3e-55 219.2 158 67.1
DCAR_012443 Daucus carota HOM05D004482 ORTHO05D005212 9.0e-55 218.4 156 67.9
Peaxi162Scf61983g00004 Petunia axillaris HOM05D004482 ORTHO05D005212 3.9e-50 203.0 127 80.3
VMungo0251G0011 Vigna mungo HOM05D004482 ORTHO05D005212 2.5e-49 200.3 159 66.7
SEGI_24214 Sequoiadendron giganteum HOM05D004482 ORTHO05D005212 4.3e-49 199.5 229 51.5
Mapoly0173s0024 Marchantia polymorpha HOM05D004482 ORTHO05D005212 7.4e-49 198.7 363 35.5
AagrBONN_evm.TU.Sc2ySwM_228.2912 Anthoceros agrestis HOM05D004482 ORTHO05D005212 4.8e-48 196.1 320 38.8
Zm00001eb405320 Zea mays HOM05D004482 ORTHO05D005212 1.1e-47 194.9 202 51.0
Gohir.D02G026860 Gossypium hirsutum HOM05D004482 ORTHO05D005212 7.6e-46 188.7 211 51.2
ECA238G0855 Erigeron canadensis HOM05D000097 ORTHO05D000041 2.5e-44 183.7 172 58.1
Pp3c14_26480 Physcomitrium patens HOM05D004482 ORTHO05D005212 1.6e-43 181.0 327 35.2
SMO334G0086 Selaginella moellendorffii HOM05D004482 ORTHO05D005212 5.3e-39 166.0 294 36.1
Gohir.D02G025833 Gossypium hirsutum HOM05D004482 ORTHO05D005212 2.6e-38 163.7 136 63.2
Sabra17G0048500 Salix brachista HOM05D004482 ORTHO05D005212 7.6e-38 162.2 113 69.9
Sabra17G0050200 Salix brachista HOM05D004482 ORTHO05D005212 7.6e-38 162.2 113 69.9
Oeu008667.1 Olea europaea HOM05D004482 ORTHO05D005212 1.4e-36 157.9 104 75.0
Os05g0490500 Oryza sativa ssp. japonica HOM05D004482 ORTHO05D005212 1.9e-36 157.5 235 44.7
DCAR_012442 Daucus carota HOM05D004482 ORTHO05D005212 3.0e-26 123.6 105 61.9
CBR_g30986 Chara braunii HOM05D000019 ORTHO05D000048 4.3e-25 119.8 181 40.3
FAN16G2719 Fragaria x ananassa HOM05D004482 ORTHO05D005212 2.2e-24 117.5 116 54.3
BcaB01g01629 Brassica carinata HOM05D004482 ORTHO05D005212 1.8e-23 114.4 246 37.0
MCO09G655 Micromonas commoda HOM05D004482 ORTHO05D005212 4.2e-20 103.2 323 29.7
VMungo0251G0179 Vigna mungo HOM05D004482 ORTHO05D005212 7.2e-20 102.4 205 33.2
TWI09G0568 Tripterygium wilfordii HOM05D004482 ORTHO05D005212 2.3e-18 97.4 116 45.7
EL10Ac4g09026 Beta vulgaris HOM05D004482 ORTHO05D005212 3.7e-16 90.1 86 53.5
CDE09G0489 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 1.7e-13 81.3 110 42.7
Zm00001eb291290 Zea mays HOM05D004482 ORTHO05D005212 1.0e-10 72.0 245 28.6
BcaC08g43547 Brassica carinata HOM05D004482 ORTHO05D005212 1.2e-06 58.5 70 40.0
BcaC02g08439 Brassica carinata HOM05D004482 ORTHO05D005212 4.5e-06 56.6 70 40.0


User provided reference genes

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