Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 2.4e-109 399.1 229 100.0
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 6.1e-49 198.4 232 49.1
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 5.4e-45 185.3 234 43.6
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 2.3e-43 179.9 276 39.5
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 7.3e-42 174.9 234 42.7
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 1.2e-39 167.5 234 44.4
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 7.0e-37 158.3 236 42.8
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 1.2e-36 157.5 237 43.0
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 1.6e-36 157.1 230 40.9
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 2.0e-36 156.8 229 40.6
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 6.6e-35 151.8 235 39.6
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 1.1e-34 151.0 239 40.6
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 6.2e-33 145.2 235 39.1
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 3.1e-32 142.9 255 36.9
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 2.0e-31 140.2 237 38.4
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 1.4e-29 134.0 234 40.2
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 1.0e-27 127.9 242 35.1
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.0e-27 127.9 216 38.4
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 3.0e-27 126.3 232 39.2
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 2.5e-26 123.2 237 38.0
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 3.3e-26 122.9 247 35.6
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 7.3e-26 121.7 239 38.1
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 2.8e-25 119.8 236 34.7
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 1.4e-24 117.5 239 38.9
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 2.3e-24 116.7 239 37.2
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 3.1e-24 116.3 240 33.8
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 4.0e-24 115.9 237 37.1
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 5.2e-24 115.5 237 36.3
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 5.2e-24 115.5 280 32.1
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 1.5e-23 114.0 245 36.3
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 2.0e-23 113.6 239 33.1
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 2.6e-23 113.2 238 37.8
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 7.6e-23 111.7 236 36.0
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 1.3e-22 110.9 245 35.1
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 2.2e-22 110.2 255 35.7
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 2.9e-22 109.8 236 35.6
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 3.7e-22 109.4 143 45.5
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 3.7e-22 109.4 234 33.8
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 1.1e-21 107.8 237 32.9
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 4.1e-21 105.9 239 32.6
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 4.1e-21 105.9 239 32.6
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 4.1e-21 105.9 236 35.2
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 7.1e-21 105.1 236 33.1
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 9.2e-21 104.8 237 35.0
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 1.2e-20 104.4 124 43.5
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 1.6e-20 104.0 244 33.2
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 2.1e-20 103.6 238 31.9
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 2.1e-20 103.6 241 36.5
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 2.1e-20 103.6 288 29.9
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 1.0e-19 101.3 241 33.2
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 3.0e-19 99.8 227 33.5
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 3.9e-19 99.4 226 32.7
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 8.6e-19 98.2 251 31.9
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 8.6e-19 98.2 242 33.9
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 1.5e-18 97.4 232 29.7
Actinidia33026 Actinidia chinensis HOM05D007349 ORTHO05D009317 3.3e-18 96.3 153 40.5
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 4.3e-18 95.9 210 31.0
Sopen00g011340 Solanum pennellii HOM05D007349 ORTHO05D009317 4.7e-17 92.4 141 40.4
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 8.1e-17 91.7 237 31.2
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 1.8e-16 90.5 235 31.1
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 2.4e-16 90.1 245 31.8
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 3.1e-16 89.7 270 31.5
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 5.2e-16 89.0 230 28.3
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 3.4e-15 86.3 45 75.6
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 5.8e-15 85.5 237 31.6
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 5.8e-15 85.5 230 30.4
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 5.8e-15 85.5 130 38.5
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 7.6e-15 85.1 45 77.8
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 7.6e-15 85.1 45 77.8
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 7.6e-15 85.1 45 77.8
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 9.9e-15 84.7 264 31.8
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 1.3e-14 84.3 248 29.8
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 1.4e-13 80.9 45 73.3
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 3.2e-13 79.7 261 29.1
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 3.2e-13 79.7 144 33.3
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 1.6e-12 77.4 273 28.9
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 4.6e-12 75.9 264 29.9
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 7.8e-12 75.1 260 28.5
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 1.0e-11 74.7 268 27.6
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 1.3e-11 74.3 287 28.6
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 1.3e-11 74.3 144 32.6
Peaxi162Scf00938g00313 Petunia axillaris HOM05D007349 ORTHO05D009317 3.0e-11 73.2 139 35.3
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 3.9e-11 72.8 251 27.9
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 5.1e-11 72.4 266 28.2
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 8.7e-11 71.6 268 28.0
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 8.7e-11 71.6 46 65.2
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 1.9e-10 70.5 46 67.4
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 1.9e-10 70.5 46 69.6
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 2.5e-10 70.1 45 68.9
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 2.5e-10 70.1 263 28.1
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 4.3e-10 69.3 41 68.3
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 1.3e-09 67.8 204 30.4
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 3.6e-09 66.2 122 35.2
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 8.1e-09 65.1 160 30.0
AUR62015355 Chenopodium quinoa HOM05D007349 ORTHO05D009317 5.8e-07 58.9 43 58.1
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 2.9e-06 56.6 34 70.6


User provided reference genes

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