Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 2.5e-108 395.6 218 100.0
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 1.2e-49 200.7 230 54.3
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.3e-48 197.2 216 57.4
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 3.8e-48 195.7 216 57.4
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 1.0e-45 187.6 229 56.8
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 1.8e-45 186.8 215 57.7
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 2.9e-40 169.5 231 51.5
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.0e-37 161.0 223 48.0
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 3.3e-36 156.0 232 46.6
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 8.2e-35 151.4 218 47.2
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 3.1e-34 149.4 233 44.2
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 4.5e-33 145.6 230 45.2
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 3.8e-32 142.5 215 46.0
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 5.0e-32 142.1 230 43.5
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 1.4e-31 140.6 230 43.0
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 1.9e-31 140.2 192 45.3
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 5.5e-31 138.7 182 48.9
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 9.4e-31 137.9 229 40.6
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.8e-29 133.7 196 43.4
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 3.0e-29 132.9 208 42.3
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 3.0e-29 132.9 231 40.7
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.9e-29 132.5 208 42.3
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 6.7e-29 131.7 207 42.5
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 8.8e-29 131.3 200 43.0
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 1.1e-28 131.0 212 41.5
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 1.1e-28 131.0 232 42.2
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.5e-28 130.6 207 42.0
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.6e-28 129.8 218 42.7
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.3e-28 129.4 207 42.0
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 3.3e-28 129.4 230 41.7
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 5.7e-28 128.6 206 39.8
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 7.4e-28 128.3 187 44.9
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 1.7e-27 127.1 202 40.6
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 1.7e-27 127.1 193 43.5
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 2.2e-27 126.7 201 42.8
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 6.3e-27 125.2 200 40.5
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 6.3e-27 125.2 196 42.3
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 8.2e-27 124.8 227 41.0
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 1.1e-26 124.4 203 43.3
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 1.8e-26 123.6 223 40.4
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 2.4e-26 123.2 204 39.2
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 2.4e-26 123.2 216 44.4
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 6.9e-26 121.7 211 38.9
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.2e-25 120.9 198 41.9
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 1.2e-25 120.9 202 40.6
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.5e-25 120.6 195 42.6
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 1.5e-25 120.6 179 42.5
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 1.5e-25 120.6 198 43.4
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 1.5e-25 120.6 161 50.9
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 3.4e-25 119.4 238 40.3
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 4.5e-25 119.0 203 42.9
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 5.9e-25 118.6 197 41.1
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 1.3e-24 117.5 197 40.6
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 3.8e-24 115.9 205 42.9
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 3.8e-24 115.9 204 40.7
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 3.8e-24 115.9 204 41.2
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 8.5e-24 114.8 239 36.8
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 8.5e-24 114.8 200 40.5
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 1.4e-23 114.0 224 37.9
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 2.5e-23 113.2 202 36.6
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 4.2e-23 112.5 202 37.6
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 7.2e-23 111.7 218 39.4
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 9.4e-23 111.3 205 39.0
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 1.6e-22 110.5 228 36.0
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 3.6e-22 109.4 190 39.5
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 3.6e-22 109.4 217 38.2
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 4.7e-22 109.0 227 37.0
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 4.7e-22 109.0 186 36.0
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 1.0e-21 107.8 212 38.7
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 2.3e-21 106.7 204 38.2
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 3.0e-21 106.3 201 36.8
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 3.0e-21 106.3 211 35.1
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 3.0e-21 106.3 221 37.1
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 5.2e-21 105.5 183 41.5
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 8.8e-21 104.8 200 38.0
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.1e-20 104.4 194 39.7
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.1e-20 104.4 202 37.1
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 1.5e-20 104.0 184 37.0
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 2.6e-20 103.2 203 36.9
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 7.4e-20 101.7 184 37.5
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 1.7e-19 100.5 198 37.9
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 1.4e-18 97.4 228 34.2
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 2.4e-18 96.7 180 37.8
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 1.6e-17 94.0 176 38.6
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 2.0e-17 93.6 102 56.9
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 2.0e-17 93.6 221 32.6
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 2.6e-17 93.2 102 55.9
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 3.5e-17 92.8 221 32.6
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 7.7e-17 91.7 176 38.6
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.3e-16 90.9 176 39.2
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.7e-16 90.5 164 40.2
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 6.5e-16 88.6 177 37.9
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 1.5e-15 87.4 103 48.5
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 5.5e-15 85.5 177 37.3
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 5.5e-15 85.5 177 37.3
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 5.5e-15 85.5 177 37.3
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 7.2e-15 85.1 176 37.5
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 9.4e-15 84.7 178 36.5
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 9.4e-15 84.7 174 36.2
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 9.4e-15 84.7 109 54.1
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.6e-14 84.0 172 34.9
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.6e-14 84.0 176 35.8
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.1e-14 83.6 168 39.9
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 6.1e-14 82.0 106 47.2
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 1.4e-13 80.9 172 34.9
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 2.3e-13 80.1 178 35.4
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 2.3e-13 80.1 172 34.9
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 2.3e-13 80.1 172 34.9
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.3e-13 80.1 187 33.7
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 4.0e-13 79.3 178 37.1
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 4.0e-13 79.3 162 38.3
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 5.2e-13 79.0 101 48.5
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 6.7e-13 78.6 174 33.3
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 6.7e-13 78.6 103 46.6
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 6.7e-13 78.6 168 35.1
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 8.8e-13 78.2 172 34.9
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 2.6e-12 76.6 154 36.4
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 3.3e-12 76.3 168 33.3
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 4.4e-12 75.9 205 32.2
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 7.5e-12 75.1 173 35.8
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 6.3e-11 72.0 198 31.8
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 8.2e-11 71.6 92 47.8
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.4e-10 70.9 170 31.8
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.4e-10 70.9 180 32.8
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 2.4e-10 70.1 167 33.5
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.6e-09 67.4 173 32.4
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.6e-09 67.4 90 44.4
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.5e-07 60.8 76 47.4
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 1.9e-07 60.5 97 40.2


User provided reference genes

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