Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 9.0e-41 169.9 88 100.0
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.4e-33 146.0 88 83.0
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.6e-24 115.2 88 70.5
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.3e-23 112.8 88 70.5
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 2.2e-23 112.1 87 67.8
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 6.5e-23 110.5 88 67.0
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 1.9e-22 109.0 87 65.5
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.9e-22 109.0 87 63.2
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 7.1e-22 107.1 88 67.0
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 9.3e-22 106.7 87 62.1
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-20 102.4 85 63.5
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-20 102.4 85 63.5
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-20 102.4 85 63.5
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-20 102.4 85 63.5
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-20 102.4 85 63.5
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-20 102.4 85 63.5
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-20 102.4 85 63.5
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-20 102.4 85 63.5
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 1.8e-20 102.4 90 64.4
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 3.0e-20 101.7 89 64.0
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 3.0e-20 101.7 90 63.3
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 5.1e-20 100.9 85 61.2
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 8.7e-20 100.1 66 77.3
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 1.1e-19 99.8 85 62.4
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 1.1e-19 99.8 90 62.2
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 1.5e-19 99.4 88 65.9
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 2.5e-19 98.6 88 60.2
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 5.7e-19 97.4 88 64.8
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 5.7e-19 97.4 88 61.4
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 1.3e-18 96.3 85 62.4
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 3.7e-18 94.7 90 60.0
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 1.4e-17 92.8 94 58.5
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 2.4e-17 92.0 84 59.5
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 6.9e-17 90.5 83 59.0
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 9.0e-17 90.1 101 54.5
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 3.4e-16 88.2 83 56.6
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 3.4e-16 88.2 87 54.0
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 4.5e-16 87.8 88 56.8
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 4.5e-16 87.8 88 56.8
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 5.9e-16 87.4 88 56.8
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 1.0e-15 86.7 88 55.7
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 1.3e-15 86.3 90 55.6
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 1.3e-15 86.3 110 48.2
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 1.7e-15 85.9 87 51.7
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 2.2e-15 85.5 88 54.5
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 2.9e-15 85.1 90 55.6
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 6.5e-15 84.0 88 55.7
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 8.5e-15 83.6 87 55.2
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 8.5e-15 83.6 87 51.7
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.1e-14 83.2 84 53.6
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 1.4e-14 82.8 86 57.0
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 4.2e-14 81.3 85 52.9
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 4.2e-14 81.3 85 52.9
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 7.2e-14 80.5 85 52.9
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 7.2e-14 80.5 71 56.3
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 1.6e-13 79.3 122 43.4
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 2.7e-13 78.6 84 52.4
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 3.6e-13 78.2 110 45.5
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 7.9e-13 77.0 85 51.8
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 1.4e-12 76.3 72 52.8
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 1.8e-12 75.9 86 52.3
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 1.8e-12 75.9 85 54.1
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 5.1e-12 74.3 72 55.6
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 5.1e-12 74.3 78 50.0
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 6.7e-12 73.9 85 56.5
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 6.7e-12 73.9 72 51.4
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 8.8e-12 73.6 84 50.0
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 1.1e-11 73.2 110 43.6
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 1.1e-11 73.2 110 43.6
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 1.1e-11 73.2 110 43.6
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 1.1e-11 73.2 72 54.2
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 1.5e-11 72.8 85 55.3
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 1.5e-11 72.8 86 51.2
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 1.5e-11 72.8 86 51.2
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 2.0e-11 72.4 74 50.0
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 2.0e-11 72.4 87 47.1
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 2.5e-11 72.0 121 38.8
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.3e-11 71.6 84 48.8
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 3.3e-11 71.6 84 46.4
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 4.3e-11 71.2 111 44.1
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 4.3e-11 71.2 111 44.1
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 4.3e-11 71.2 86 50.0
Psat6g108960 Pisum sativum HOM05D005842 ORTHO05D007077 5.7e-11 70.9 140 38.6
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 9.7e-11 70.1 85 55.3
CsaV3_2G012270 Cucumis sativus L. HOM05D005842 ORTHO05D007077 9.7e-11 70.1 99 44.4
Sed0006099 Sechium edule HOM05D005842 ORTHO05D007077 1.3e-10 69.7 87 46.0
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 1.7e-10 69.3 85 55.3
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 2.2e-10 68.9 110 41.8
Lalb_Chr19g0128561 Lupinus albus HOM05D005842 ORTHO05D007077 3.7e-10 68.2 61 62.3
AL7G43170 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 1.4e-09 66.2 110 40.0
BcaC02g09416 Brassica carinata HOM05D005842 ORTHO05D007077 1.8e-09 65.9 93 45.2
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 1.8e-09 65.9 110 41.8
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 1.8e-09 65.9 86 47.7
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 3.1e-09 65.1 110 40.9
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 4.1e-09 64.7 89 43.8
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 4.1e-09 64.7 89 43.8
BcaB04g17686 Brassica carinata HOM05D005842 ORTHO05D007077 5.3e-09 64.3 110 40.0
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 5.3e-09 64.3 90 47.8
C04p42360 Brassica napus HOM05D005842 ORTHO05D007077 9.1e-09 63.5 109 41.3
ATR0787G056 Amborella trichopoda HOM05D005842 ORTHO05D007077 1.2e-08 63.2 86 40.7
AT4G13560 Arabidopsis thaliana HOM05D005842 ORTHO05D007077 1.2e-08 63.2 110 39.1
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 1.2e-08 63.2 89 44.9
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 1.2e-08 63.2 89 44.9
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 1.2e-08 63.2 89 44.9
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 1.2e-08 63.2 89 44.9
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 1.2e-08 63.2 87 47.1
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 1.5e-08 62.8 110 39.1
HanXRQChr14g0434231 Helianthus annuus HOM05D005842 ORTHO05D007077 1.5e-08 62.8 85 44.7
Lalb_Chr03g0036861 Lupinus albus HOM05D005842 ORTHO05D007077 2.6e-08 62.0 61 57.4
PGSC0003DMG400008623 Solanum tuberosum HOM05D005842 ORTHO05D007077 2.6e-08 62.0 86 44.2
TPR.G23959 Trifolium pratense HOM05D005842 ORTHO05D007077 2.6e-08 62.0 64 54.7
Sopen12g032850 Solanum pennellii HOM05D005842 ORTHO05D007077 3.4e-08 61.6 86 44.2
MELO3C023065.2 Cucumis melo HOM05D005842 ORTHO05D007077 4.5e-08 61.2 82 42.7
A08p06740 Brassica napus HOM05D005842 ORTHO05D007077 5.9e-08 60.8 111 39.6
BolC8t47646H Brassica oleracea HOM05D005842 ORTHO05D007077 5.9e-08 60.8 111 39.6
BraA08t32692Z Brassica rapa HOM05D005842 ORTHO05D007077 5.9e-08 60.8 111 39.6
Aqoxy5G00093 Aquilegia oxysepala HOM05D005842 ORTHO05D007077 1.0e-07 60.1 86 44.2
Solyc12g097050.2 Solanum lycopersicum HOM05D005842 ORTHO05D007077 1.0e-07 60.1 86 43.0
Carub.0007s2898 Capsella rubella HOM05D005842 ORTHO05D007077 5.0e-07 57.8 110 37.3
Lsat_1_v5_gn_2_41500 Lactuca sativa HOM05D005842 ORTHO05D007077 5.0e-07 57.8 70 51.4
Eucgr.F02549 Eucalyptus grandis HOM05D008630 ORTHO05D010727 1.4e-06 56.2 78 46.2
CANSAT78G1061 Cannabis sativa HOM05D005842 ORTHO05D007077 1.9e-06 55.8 104 37.5
CANSAT78G1849 Cannabis sativa HOM05D005842 ORTHO05D007077 1.9e-06 55.8 110 38.2
Medtr1g045950 Medicago truncatula HOM05D005842 ORTHO05D007077 1.9e-06 55.8 173 31.2
C08p07940 Brassica napus HOM05D005842 ORTHO05D007077 3.2e-06 55.1 45 64.4
Duzib151G0923 Durio zibethinus HOM05D005842 ORTHO05D007077 4.2e-06 54.7 35 74.3
Duzib192G0134 Durio zibethinus HOM05D008630 ORTHO05D010727 9.4e-06 53.5 76 44.7
HPP92_007288 Vanilla planifolia HOM05D005842 ORTHO05D007077 9.4e-06 53.5 95 37.9


User provided reference genes

Program Settings