Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00323 Erythranthe guttata HOM05D006167 ORTHO05D007635 2.0e-29 131.7 66 100.0
SalBow3G0251 Salvia bowleyana HOM05D006167 ORTHO05D007635 5.5e-27 123.6 66 89.4
SalBow3G4531 Salvia bowleyana HOM05D006167 ORTHO05D007635 5.5e-27 123.6 66 89.4
SalBow5G0916 Salvia bowleyana HOM05D006167 ORTHO05D007635 7.2e-27 123.2 65 89.2
SalBow5G2020 Salvia bowleyana HOM05D006167 ORTHO05D007635 7.2e-27 123.2 65 89.2
SalBow5G4407 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.6e-26 122.1 66 87.9
SalBow5G4759 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.6e-26 122.1 66 87.9
SGA_v2.0_scaffold35G14127 Striga asiatica HOM05D006167 ORTHO05D007635 1.4e-22 109.0 66 80.3
SGA_v2.0_scaffold189G40388 Striga asiatica HOM05D006167 ORTHO05D007635 4.5e-21 104.0 66 77.3
unitig_744.g24610 Utricularia gibba HOM05D006167 ORTHO05D007635 1.3e-20 102.4 61 85.2
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 9.8e-16 86.3 67 70.1
Migut.M01352 Erythranthe guttata HOM05D006167 ORTHO05D007635 3.7e-15 84.3 68 64.7
HanXRQChr13g0410431 Helianthus annuus HOM05D006167 ORTHO05D007635 4.1e-14 80.9 68 66.2
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 4.1e-14 80.9 65 61.5
Lsat_1_v5_gn_1_76160 Lactuca sativa HOM05D006167 ORTHO05D007635 1.2e-13 79.3 65 67.7
Peaxi162Scf01007g00005 Petunia axillaris HOM05D006167 ORTHO05D007635 2.0e-13 78.6 72 61.1
Cc03_g06850 Coffea canephora HOM05D006167 ORTHO05D007635 1.3e-12 75.9 70 61.4
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 5.0e-12 73.9 66 62.1
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 5.0e-12 73.9 66 65.2
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 6.6e-12 73.6 66 60.6
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 6.6e-12 73.6 66 60.6
DCAR_027359 Daucus carota HOM05D006167 ORTHO05D007635 6.6e-12 73.6 64 64.1
CAN.G566.4 Capsicum annuum HOM05D006167 ORTHO05D007635 1.1e-11 72.8 69 59.4
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 1.1e-11 72.8 61 67.2
Solyc12g097040.1 Solanum lycopersicum HOM05D006167 ORTHO05D007635 1.1e-11 72.8 68 61.8
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 1.5e-11 72.4 66 60.6
ECA248G1405 Erigeron canadensis HOM05D006167 ORTHO05D007635 1.5e-11 72.4 78 55.1
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 3.3e-11 71.2 66 57.6
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 4.3e-11 70.9 66 60.6
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 5.6e-11 70.5 67 61.2
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 5.6e-11 70.5 66 60.6
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 9.5e-11 69.7 66 56.1
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 9.5e-11 69.7 66 57.6
Ca_26216_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 1.2e-10 69.3 62 59.7
Dinv18834 Davidia involucrata HOM05D006167 ORTHO05D007635 2.1e-10 68.6 66 56.1
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 2.8e-10 68.2 66 54.5
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 3.6e-10 67.8 67 58.2
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 3.6e-10 67.8 63 55.6
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 6.1e-10 67.0 62 59.7
Hma1.2p1_0014F.1_g009760 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 6.1e-10 67.0 63 54.0
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 6.1e-10 67.0 66 56.1
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 8.0e-10 66.6 66 48.5
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 8.0e-10 66.6 66 54.5
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 8.0e-10 66.6 66 54.5
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 8.0e-10 66.6 66 54.5
Lsat_1_v5_gn_2_42001 Lactuca sativa HOM05D006167 ORTHO05D007635 8.0e-10 66.6 68 57.4
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 1.0e-09 66.2 66 59.1
Ca_00011_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 1.8e-09 65.5 62 56.5
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.8e-09 65.5 63 55.6
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 2.3e-09 65.1 62 59.7
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 3.1e-09 64.7 61 59.0
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 4.0e-09 64.3 66 51.5
Rhsim09G0043900 Rhododendron simsii HOM05D006167 ORTHO05D007635 5.2e-09 63.9 47 66.0
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 6.8e-09 63.5 66 53.0
Hma1.2p1_0144F.1_g065120 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.5e-08 62.4 63 54.0
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 1.5e-08 62.4 66 51.5
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 1.5e-08 62.4 66 51.5
RcHm_v2.0_Chr4g0396111 Rosa chinensis HOM05D006167 ORTHO05D007635 2.0e-08 62.0 64 50.0
Aa31LG9G4150 Aethionema arabicum HOM05D006167 ORTHO05D007635 3.4e-08 61.2 67 49.3
vmacro15491 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 3.4e-08 61.2 55 54.5
vmacro22827 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 3.4e-08 61.2 55 54.5
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 5.8e-08 60.5 66 50.0
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 5.8e-08 60.5 41 75.6
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 9.8e-08 59.7 66 48.5
Sc13g0003020 Simmondsia chinensis HOM05D006167 ORTHO05D007635 1.7e-07 58.9 68 52.9
TPR.G23974 Trifolium pratense HOM05D006167 ORTHO05D007635 2.2e-07 58.5 62 58.1
COL.COLO4_16007 Corchorus olitorius HOM05D006167 ORTHO05D007635 2.9e-07 58.2 63 50.8
Carub.0007s2902 Capsella rubella HOM05D006167 ORTHO05D007635 4.9e-07 57.4 66 43.9
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 4.9e-07 57.4 66 47.0
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 4.9e-07 57.4 66 47.0
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 4.9e-07 57.4 66 47.0
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 6.4e-07 57.0 66 43.9
CARHR219150 Cardamine hirsuta HOM05D006167 ORTHO05D007635 6.4e-07 57.0 66 43.9
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 6.4e-07 57.0 66 51.5
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 6.4e-07 57.0 49 65.3
AL5G12040 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 8.3e-07 56.6 66 45.5
AL5G12300 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 8.3e-07 56.6 66 45.5
BcaB04g17822 Brassica carinata HOM05D006167 ORTHO05D007635 8.3e-07 56.6 66 42.4
BcaC07g37498 Brassica carinata HOM05D006167 ORTHO05D007635 8.3e-07 56.6 66 42.4
A08p07960 Brassica napus HOM05D006167 ORTHO05D007635 8.3e-07 56.6 66 42.4
BolC8t47817H Brassica oleracea HOM05D006167 ORTHO05D007635 8.3e-07 56.6 66 42.4
BraA08t32818Z Brassica rapa HOM05D006167 ORTHO05D007635 8.3e-07 56.6 66 42.4
Gohir.D02G050200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 8.3e-07 56.6 66 43.9
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 1.1e-06 56.2 66 43.9
Sp7g11110 Schrenkiella parvula HOM05D006167 ORTHO05D007635 1.1e-06 56.2 66 42.4
Thhalv10026745m.g Eutrema salsugineum HOM05D006167 ORTHO05D007635 1.9e-06 55.5 66 42.4
arahy.Tifrunner.gnm1.ann1.C36CE0 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.4e-06 55.1 46 63.0
FAN12G1688 Fragaria x ananassa HOM05D006167 ORTHO05D007635 2.4e-06 55.1 58 50.0
FAN17G0547 Fragaria x ananassa HOM05D006167 ORTHO05D007635 2.4e-06 55.1 58 50.0
Gohir.D08G110800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.2e-06 54.7 66 43.9
Phvul.007G232600 Phaseolus vulgaris HOM05D006167 ORTHO05D007635 3.2e-06 54.7 62 53.2
Gorai.008G097400 Gossypium raimondii HOM05D006167 ORTHO05D007635 4.1e-06 54.3 66 45.5
Gorai.012G072500 Gossypium raimondii HOM05D006167 ORTHO05D007635 4.1e-06 54.3 66 43.9
Gorai.004G118700 Gossypium raimondii HOM05D006167 ORTHO05D007635 5.4e-06 53.9 66 43.9
Sc19g0005700 Simmondsia chinensis HOM05D006167 ORTHO05D007635 5.4e-06 53.9 67 50.7
A02p27890 Brassica napus HOM05D016819 ORTHO05D017546 7.0e-06 53.5 47 55.3
BraA02t07827Z Brassica rapa HOM05D016819 ORTHO05D017546 7.0e-06 53.5 47 55.3
FvH4_4g05200 Fragaria vesca HOM05D006167 ORTHO05D007635 7.0e-06 53.5 58 48.3
Gohir.D12G087200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 7.0e-06 53.5 66 47.0
Gohir.D09G064700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 9.2e-06 53.1 66 43.9


User provided reference genes

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