Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 4.1e-142 508.1 260 100.0
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 4.4e-112 408.3 258 79.1
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 2.1e-109 399.4 246 78.9
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.7e-108 396.4 258 76.4
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 5.1e-108 394.8 249 76.7
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 5.6e-107 391.3 218 83.9
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.8e-105 386.3 260 73.1
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 8.9e-105 384.0 260 73.1
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 9.9e-104 380.6 223 80.3
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 1.3e-103 380.2 221 80.5
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.8e-103 378.6 245 75.5
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 4.9e-103 378.3 260 72.3
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 2.4e-102 375.9 223 78.9
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 4.2e-102 375.2 256 75.0
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 5.4e-102 374.8 219 82.6
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 5.4e-102 374.8 220 80.5
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 9.3e-102 374.0 258 73.6
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.1e-101 372.9 220 80.0
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 1.0e-100 370.5 257 72.0
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 2.5e-99 365.9 215 79.5
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 3.3e-99 365.5 222 76.6
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.6e-98 363.2 246 73.6
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 2.1e-98 362.8 216 78.2
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 8.1e-98 360.9 215 77.7
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 1.1e-97 360.5 214 79.4
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 1.1e-97 360.5 215 77.7
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 3.1e-97 359.0 215 76.3
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 5.3e-97 358.2 221 76.0
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 6.9e-97 357.8 221 76.0
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 6.9e-97 357.8 215 78.1
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 9.0e-97 357.5 258 69.0
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 2.0e-96 356.3 221 74.7
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 2.6e-96 355.9 216 75.0
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 1.7e-95 353.2 222 73.9
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 1.7e-95 353.2 214 77.1
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 2.2e-95 352.8 222 74.8
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 3.8e-95 352.1 221 73.8
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 3.8e-95 352.1 246 71.1
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 3.8e-95 352.1 222 73.4
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 8.4e-95 350.9 222 74.3
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 1.1e-94 350.5 222 74.8
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.4e-94 350.1 214 75.2
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 1.4e-94 350.1 218 74.3
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 1.9e-94 349.7 217 73.7
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 3.2e-94 349.0 222 72.5
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 4.2e-94 348.6 214 75.2
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 5.4e-94 348.2 221 72.9
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 5.4e-94 348.2 217 74.2
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 7.1e-94 347.8 258 67.8
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 9.3e-94 347.4 217 72.8
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 4.6e-93 345.1 216 74.5
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 4.6e-93 345.1 243 70.0
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 4.6e-93 345.1 218 72.5
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 6.0e-93 344.7 216 72.7
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 6.0e-93 344.7 209 76.1
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 7.9e-93 344.4 218 72.9
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 1.3e-92 343.6 214 72.9
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 1.8e-92 343.2 217 74.7
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 2.3e-92 342.8 224 73.7
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 3.9e-92 342.0 214 72.0
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 8.7e-92 340.9 220 71.4
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.1e-91 340.5 270 64.8
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 1.5e-91 340.1 218 72.9
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.9e-91 339.7 215 74.4
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 1.9e-91 339.7 215 72.1
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 2.5e-91 339.3 215 72.6
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 3.3e-91 339.0 215 73.5
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 4.3e-91 338.6 216 73.1
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 5.6e-91 338.2 214 71.5
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 5.6e-91 338.2 214 71.5
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 5.6e-91 338.2 214 71.5
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 5.6e-91 338.2 215 72.1
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 7.4e-91 337.8 214 72.4
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 7.4e-91 337.8 220 70.0
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 2.8e-90 335.9 194 79.9
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 3.7e-90 335.5 215 73.0
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 4.8e-90 335.1 214 71.0
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 8.1e-90 334.3 215 70.7
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 1.1e-89 334.0 215 70.7
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.1e-89 334.0 258 63.2
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 1.1e-89 334.0 223 70.0
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 1.1e-89 334.0 222 69.8
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.4e-89 333.6 214 70.6
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 1.4e-89 333.6 214 70.6
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 1.4e-89 333.6 217 69.6
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 1.4e-89 333.6 233 69.1
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.8e-89 333.2 242 65.7
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 3.1e-89 332.4 339 53.7
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 4.0e-89 332.0 216 71.3
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 5.3e-89 331.6 215 69.8
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 6.9e-89 331.3 242 64.0
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 2.6e-88 329.3 216 72.2
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 3.8e-87 325.5 211 69.7
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 8.4e-87 324.3 214 69.2
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 3.2e-86 322.4 222 69.4
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 5.1e-84 315.1 222 68.9
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 2.8e-82 309.3 215 65.1
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 2.9e-79 299.3 200 70.5
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 4.2e-78 295.4 207 67.1
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 2.1e-77 293.1 170 81.2
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 2.5e-75 286.2 162 82.1
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 2.6e-72 276.2 165 77.0
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 2.1e-69 266.5 217 58.1
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 8.7e-68 261.2 215 60.5
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 3.3e-67 259.2 217 58.1
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.0e-63 247.7 215 54.4
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 1.9e-54 216.9 139 73.4
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 8.8e-52 208.0 218 53.2
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 9.7e-43 177.9 101 78.2
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 1.7e-42 177.2 213 45.5
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 9.1e-41 171.4 126 64.3
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 3.8e-39 166.0 208 47.1
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 4.2e-38 162.5 212 42.0
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 8.3e-34 148.3 96 70.8
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 1.4e-33 147.5 213 39.4
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.8e-33 147.1 125 64.8
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.4e-33 146.7 90 76.7
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 4.5e-32 142.5 90 76.7
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 4.5e-32 142.5 90 76.7
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 3.3e-30 136.3 104 64.4
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 7.5e-27 125.2 150 47.3
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 7.5e-27 125.2 150 47.3
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.7e-26 124.0 90 70.0
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 2.2e-26 123.6 96 64.6
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 6.6e-23 112.1 101 58.4
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.6e-21 107.5 60 81.7
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 1.6e-21 107.5 188 38.8
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 3.6e-21 106.3 69 73.9
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 1.7e-15 87.4 171 32.2
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.9e-14 84.0 52 73.1
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 1.9e-14 84.0 48 81.2
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.1e-12 78.2 186 32.3
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 5.4e-09 65.9 41 75.6


User provided reference genes

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