Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 4.2e-44 181.0 96 100.0
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 1.9e-23 112.5 88 68.2
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 6.2e-19 97.4 92 58.7
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 6.8e-18 94.0 82 64.6
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 1.2e-17 93.2 86 58.1
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 9.9e-17 90.1 71 62.0
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 9.9e-17 90.1 85 60.0
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 4.9e-16 87.8 97 54.6
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 6.4e-16 87.4 97 54.6
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 1.4e-15 86.3 86 59.3
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 1.9e-15 85.9 83 59.0
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 1.9e-15 85.9 82 57.3
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 2.4e-15 85.5 68 66.2
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 2.4e-15 85.5 72 62.5
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 2.4e-15 85.5 74 59.5
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 3.2e-15 85.1 74 59.5
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 4.1e-15 84.7 74 58.1
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 7.1e-15 84.0 98 48.0
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 9.2e-15 83.6 93 50.5
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 9.2e-15 83.6 97 48.5
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 9.2e-15 83.6 92 51.1
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 9.2e-15 83.6 92 53.3
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 9.2e-15 83.6 92 53.3
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 1.2e-14 83.2 63 65.1
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.6e-14 82.8 101 51.5
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 1.6e-14 82.8 79 57.0
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 2.7e-14 82.0 69 63.8
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 2.7e-14 82.0 95 52.6
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 3.5e-14 81.6 100 50.0
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 4.6e-14 81.3 65 63.1
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 4.6e-14 81.3 91 50.5
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 6.0e-14 80.9 98 46.9
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 7.8e-14 80.5 85 54.1
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 7.8e-14 80.5 85 54.1
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 1.0e-13 80.1 85 52.9
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 1.7e-13 79.3 62 62.9
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 1.7e-13 79.3 81 55.6
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 2.3e-13 79.0 63 68.3
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 2.3e-13 79.0 63 68.3
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 3.0e-13 78.6 98 44.9
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 3.0e-13 78.6 81 50.6
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 3.9e-13 78.2 65 58.5
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 3.9e-13 78.2 63 65.1
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 5.1e-13 77.8 97 47.4
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 5.1e-13 77.8 71 54.9
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 5.1e-13 77.8 94 48.9
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 5.1e-13 77.8 84 54.8
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 8.6e-13 77.0 84 47.6
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 8.6e-13 77.0 72 61.1
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 1.1e-12 76.6 90 51.1
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 1.1e-12 76.6 70 55.7
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 1.1e-12 76.6 75 53.3
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 1.9e-12 75.9 74 52.7
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 1.9e-12 75.9 74 52.7
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 2.5e-12 75.5 79 54.4
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 2.5e-12 75.5 90 50.0
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 3.3e-12 75.1 72 56.9
unitig_26.g9548 Utricularia gibba HOM05D005475 ORTHO05D006575 3.3e-12 75.1 113 46.0
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 4.3e-12 74.7 74 56.8
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 4.3e-12 74.7 91 45.1
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 2.1e-11 72.4 85 54.1
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 2.1e-11 72.4 92 47.8
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 2.8e-11 72.0 77 55.8
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 3.6e-11 71.6 62 58.1
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 3.6e-11 71.6 78 53.8
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 3.6e-11 71.6 73 50.7
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 4.7e-11 71.2 92 45.7
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 4.7e-11 71.2 98 43.9
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 4.7e-11 71.2 74 48.6
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 6.2e-11 70.9 100 49.0
CDE08G0603 Ceratophyllum demersum HOM05D005475 ORTHO05D006575 1.1e-10 70.1 98 43.9
Migut.G00489 Erythranthe guttata HOM05D005475 ORTHO05D006575 1.4e-10 69.7 93 46.2
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 1.4e-10 69.7 66 54.5
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 1.8e-10 69.3 89 44.9
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 2.4e-10 68.9 74 45.9
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 2.4e-10 68.9 53 62.3
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 2.4e-10 68.9 53 60.4
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 2.4e-10 68.9 53 60.4
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 2.4e-10 68.9 78 51.3
Actinidia39922 Actinidia chinensis HOM05D005475 ORTHO05D006575 3.1e-10 68.6 73 54.8
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 3.1e-10 68.6 91 45.1
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 3.1e-10 68.6 53 62.3
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 3.1e-10 68.6 86 45.3
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 3.1e-10 68.6 53 62.3
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 3.1e-10 68.6 86 45.3
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 3.1e-10 68.6 78 51.3
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 4.0e-10 68.2 53 60.4
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 4.0e-10 68.2 53 60.4
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 4.0e-10 68.2 53 60.4
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 4.0e-10 68.2 103 47.6
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 4.0e-10 68.2 103 47.6
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 6.8e-10 67.4 48 72.9
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 1.2e-09 66.6 52 59.6
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 1.2e-09 66.6 85 43.5
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.2e-09 66.6 103 46.6
CSS0022443 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 1.5e-09 66.2 83 57.8
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 2.0e-09 65.9 53 58.5
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 2.0e-09 65.9 53 58.5
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 2.0e-09 65.9 81 56.8
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 9.9e-09 63.5 74 48.6
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 9.9e-09 63.5 55 56.4
unitig_749.g13516 Utricularia gibba HOM05D005475 ORTHO05D006575 1.3e-08 63.2 107 43.9
Lj5g0027748 Lotus japonicus HOM05D005475 ORTHO05D006575 2.2e-08 62.4 75 50.7
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 2.2e-08 62.4 94 45.7
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 2.9e-08 62.0 99 42.4
AUR62002181 Chenopodium quinoa HOM05D005475 ORTHO05D006575 8.4e-08 60.5 72 52.8
AUR62015529 Chenopodium quinoa HOM05D005475 ORTHO05D006575 8.4e-08 60.5 72 52.8
Ah.04g155370 Amaranthus hybridus HOM05D005475 ORTHO05D006575 1.9e-07 59.3 78 52.6
PGR031G0084 Punica granatum HOM05D005475 ORTHO05D006575 3.2e-07 58.5 108 42.6
Lalb_Chr02g0150621 Lupinus albus HOM05D005475 ORTHO05D006575 4.2e-07 58.2 55 56.4
Lalb_Chr03g0037011 Lupinus albus HOM05D005475 ORTHO05D006575 4.2e-07 58.2 121 35.5
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 5.4e-07 57.8 105 39.0
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 5.4e-07 57.8 96 39.6
Sed0016405 Sechium edule HOM05D005475 ORTHO05D006575 5.4e-07 57.8 68 52.9
BcaC07g37337 Brassica carinata HOM05D005475 ORTHO05D006575 7.1e-07 57.4 53 56.6
C08p07780 Brassica napus HOM05D005475 ORTHO05D006575 7.1e-07 57.4 53 56.6
BolC8t47626H Brassica oleracea HOM05D005475 ORTHO05D006575 7.1e-07 57.4 53 56.6
Os03g0138400 Oryza sativa ssp. japonica HOM05D005475 ORTHO05D006575 1.2e-06 56.6 73 49.3
MELO3C006388.2 Cucumis melo HOM05D000730 ORTHO05D000578 1.6e-06 56.2 122 34.4
HPP92_007739 Vanilla planifolia HOM05D005475 ORTHO05D006575 3.5e-06 55.1 40 67.5
Duzib151G0481 Durio zibethinus HOM05D005475 ORTHO05D006575 4.6e-06 54.7 61 52.5
Rhsim04G0173600 Rhododendron simsii HOM05D005475 ORTHO05D006575 4.6e-06 54.7 125 37.6
EL10Ac3g04956 Beta vulgaris HOM05D005475 ORTHO05D006575 6.0e-06 54.3 50 56.0
Sabra10G0040200 Salix brachista HOM05D005475 ORTHO05D006575 6.0e-06 54.3 66 47.0


User provided reference genes

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