Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 4.0e-134 481.5 252 100.0
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 1.2e-122 443.4 252 90.1
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 1.8e-118 429.5 252 86.5
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 3.1e-118 428.7 252 86.9
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 6.8e-118 427.6 252 86.5
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 2.0e-117 426.0 283 79.5
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 7.6e-117 424.1 252 84.5
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 1.7e-116 422.9 252 86.1
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 85.3
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 3.8e-116 421.8 252 85.7
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 3.8e-116 421.8 252 85.7
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 2.4e-115 419.1 252 83.3
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 3.2e-115 418.7 251 83.7
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 84.5
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 86.1
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 4.6e-114 414.8 254 83.9
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 6.0e-114 414.5 252 85.7
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 1.0e-113 413.7 254 83.5
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 1.3e-113 413.3 252 84.1
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 1.7e-113 412.9 252 82.1
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 83.3
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 84.5
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 85.3
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 85.3
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 6.6e-113 411.0 252 81.3
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 6.6e-113 411.0 252 85.3
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 8.7e-113 410.6 250 82.8
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 8.7e-113 410.6 248 84.3
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 8.7e-113 410.6 252 82.9
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 1.1e-112 410.2 253 83.8
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 1.1e-112 410.2 252 83.7
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 1.5e-112 409.8 252 83.3
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 1.9e-112 409.5 252 84.5
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 84.5
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 83.3
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 82.9
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 4.3e-112 408.3 256 82.4
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 4.3e-112 408.3 252 85.7
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 7.3e-112 407.5 256 82.4
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 9.6e-112 407.1 252 81.3
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 9.6e-112 407.1 252 82.1
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 1.2e-111 406.8 252 81.3
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 1.2e-111 406.8 252 81.0
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 1.6e-111 406.4 252 82.1
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 1.6e-111 406.4 250 81.6
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 1.6e-111 406.4 252 81.7
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 2.1e-111 406.0 252 82.5
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 2.8e-111 405.6 252 82.5
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 4.7e-111 404.8 253 79.4
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 8.1e-111 404.1 252 81.7
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 1.4e-110 403.3 252 82.1
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 2.4e-110 402.5 253 82.6
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 2.4e-110 402.5 252 79.8
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 3.1e-110 402.1 252 81.0
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 4.0e-110 401.7 252 81.0
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 4.0e-110 401.7 252 81.3
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 5.3e-110 401.4 260 80.0
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 6.9e-110 401.0 252 80.2
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 2.0e-109 399.4 252 81.3
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 2.0e-109 399.4 252 80.6
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 3.4e-109 398.7 252 81.3
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 9.9e-109 397.1 252 81.3
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 1.3e-108 396.7 252 80.6
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 2.2e-108 396.0 252 79.4
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 2.9e-108 395.6 252 80.2
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 3.8e-108 395.2 252 81.0
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 1.1e-107 393.7 252 78.6
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 1.1e-107 393.7 252 78.2
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 1.1e-107 393.7 252 79.0
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 1.1e-107 393.7 252 79.0
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 1.9e-107 392.9 252 78.6
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 2.4e-107 392.5 252 80.2
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 9.3e-107 390.6 252 79.4
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 9.3e-107 390.6 250 79.6
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 2.1e-106 389.4 252 79.0
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 2.1e-106 389.4 283 72.4
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 4.6e-106 388.3 239 82.0
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 4.6e-106 388.3 252 80.6
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 6.0e-106 387.9 252 78.6
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 3.9e-105 385.2 254 78.0
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 3.9e-105 385.2 252 77.0
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 5.1e-105 384.8 252 76.6
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 5.1e-105 384.8 281 73.0
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 6.6e-105 384.4 249 79.1
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 8.7e-105 384.0 249 79.1
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 4.3e-104 381.7 252 77.8
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 9.6e-104 380.6 256 75.8
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 1.3e-103 380.2 249 78.7
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 2.4e-102 375.9 259 76.1
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 5.3e-102 374.8 256 74.6
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 6.0e-98 361.3 254 71.7
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 7.9e-98 360.9 252 72.6
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 3.9e-97 358.6 252 71.4
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 6.7e-97 357.8 221 82.8
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 7.4e-96 354.4 272 71.3
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 2.1e-95 352.8 252 71.0
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 9.3e-91 337.4 267 66.3
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 1.6e-90 336.7 274 70.1
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 1.5e-88 330.1 191 89.0
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 2.5e-88 329.3 252 70.6
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 9.0e-86 320.9 260 67.3
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 1.9e-80 303.1 177 87.0
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 1.6e-79 300.1 177 85.3
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 6.3e-79 298.1 190 78.4
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 8.2e-79 297.7 252 61.9
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.1e-78 297.4 176 84.1
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 1.0e-76 290.8 229 68.1
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 4.6e-74 282.0 282 55.7
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 7.9e-74 281.2 255 58.4
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 1.4e-65 253.8 254 54.7
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 2.8e-63 246.1 151 82.1
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 1.1e-62 244.2 252 54.8
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 3.1e-62 242.7 147 84.4
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 6.7e-57 224.9 254 48.0
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 2.6e-48 196.4 123 78.9
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 1.3e-36 157.5 108 77.8
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 1.7e-36 157.1 96 78.1
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 6.1e-34 148.7 91 75.8
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 2.2e-31 140.2 105 73.3
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 6.2e-18 95.5 68 66.2
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 2.3e-12 77.0 49 73.5
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 6.2e-10 68.9 49 67.3
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 5.2e-09 65.9 34 82.4


User provided reference genes

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