Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 1.8e-155 552.7 320 100.0
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 4.9e-28 129.4 210 40.5
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 1.2e-21 108.2 204 41.7
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 5.8e-21 105.9 233 38.2
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 2.9e-20 103.6 151 45.0
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 4.9e-20 102.8 151 44.4
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 1.1e-19 101.7 151 44.4
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 9.2e-19 98.6 242 33.1
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 4.6e-18 96.3 156 39.1
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 5.1e-17 92.8 149 43.6
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 8.7e-17 92.0 146 41.1
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 1.9e-16 90.9 156 41.7
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 4.3e-16 89.7 166 36.1
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 4.3e-16 89.7 152 38.2
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 1.8e-14 84.3 159 35.2
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 5.2e-14 82.8 153 36.6
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 4.4e-13 79.7 154 35.7
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 5.8e-13 79.3 156 37.2
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 3.8e-12 76.6 243 29.2
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 4.9e-12 76.3 212 33.0
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 6.4e-12 75.9 154 37.0
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 1.1e-11 75.1 159 35.2
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 1.9e-11 74.3 157 35.7
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 5.4e-11 72.8 156 36.5
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 7.1e-11 72.4 133 33.1
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 1.2e-10 71.6 202 33.7
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 2.7e-10 70.5 154 31.2
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 2.7e-10 70.5 154 31.2
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 7.8e-10 68.9 238 30.3
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 7.8e-10 68.9 215 30.7
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 7.8e-10 68.9 154 30.5
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 1.7e-09 67.8 162 31.5
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.3e-09 67.4 183 32.2
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 5.1e-09 66.2 183 31.7
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 6.6e-09 65.9 183 31.7
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 6.6e-09 65.9 183 31.7
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 1.5e-08 64.7 191 30.4
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 2.5e-08 63.9 156 30.1
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 3.3e-08 63.5 166 30.7
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 4.3e-08 63.2 139 30.9
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 5.6e-08 62.8 160 31.9
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 9.6e-08 62.0 141 33.3
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 1.3e-07 61.6 139 33.8
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 8.1e-07 58.9 214 28.0
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 1.1e-06 58.5 86 40.7
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 1.1e-06 58.5 185 29.7
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 1.8e-06 57.8 156 32.1
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 9.0e-06 55.5 315 20.3
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 9.0e-06 55.5 134 32.1


User provided reference genes

Program Settings